RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 THSD7BQ9C0I4 1608 aa13.46□□□□□ -0.25
NDC80-204ENST00000575515 BCORQ6W2J9 1755 aa13.46□□□□□ -0.25
NDC80-204ENST00000575515 ITGBL1O95965 494 aaPredicted RBP13.46□□□□□ -0.25
NDC80-204ENST00000575515 AKAP4Q5JQC9 854 aa13.46□□□□□ -0.25
NDC80-204ENST00000575515 SOGA3Q5TF21 947 aa13.46□□□□□ -0.25
NDC80-204ENST00000575515 PRR5LQ6MZQ0 368 aa13.46□□□□□ -0.25
NDC80-204ENST00000575515 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.25
NDC80-204ENST00000575515 CNKSR1Q969H4 720 aa13.46□□□□□ -0.25
NDC80-204ENST00000575515 L3MBTL3Q96JM7 780 aaPredicted RBP13.46□□□□□ -0.25
NDC80-204ENST00000575515 WDR33Q9C0J8 1336 aaKnown RBP13.45□□□□□ -0.26
NDC80-204ENST00000575515 A0A087WZG4 1122 aa13.45□□□□□ -0.26
NDC80-204ENST00000575515 RASSF10A6NK89 507 aa13.45□□□□□ -0.26
NDC80-204ENST00000575515 PAXIP1Q6ZW49 1069 aaPredicted RBP13.45□□□□□ -0.26
NDC80-204ENST00000575515 CFAP44Q96MT7 982 aa13.45□□□□□ -0.26
NDC80-204ENST00000575515 BEGAINQ9BUH8 593 aa13.45□□□□□ -0.26
NDC80-204ENST00000575515 LGR6Q9HBX8 967 aa13.45□□□□□ -0.26
NDC80-204ENST00000575515 HACL1Q9UJ83 578 aa13.45□□□□□ -0.26
NDC80-204ENST00000575515 EPHX2P34913 555 aa13.44□□□□□ -0.26
NDC80-204ENST00000575515 ST5P78524 1137 aa13.44□□□□□ -0.26
NDC80-204ENST00000575515 CNBD1Q8NA66 436 aa13.44□□□□□ -0.26
NDC80-204ENST00000575515 CASP8AP2Q9UKL3 1982 aa13.43□□□□□ -0.26
NDC80-204ENST00000575515 ZNF541Q9H0D2 1346 aa13.43□□□□□ -0.26
NDC80-204ENST00000575515 RNMTO43148 476 aaKnown RBP13.43□□□□□ -0.26
NDC80-204ENST00000575515 STARD3NLO95772 234 aa13.43□□□□□ -0.26
NDC80-204ENST00000575515 CENPBP07199 599 aaPredicted RBP13.43□□□□□ -0.26
NDC80-204ENST00000575515 GRM1Q13255 1194 aa13.43□□□□□ -0.26
NDC80-204ENST00000575515 MAP1SQ66K74 1059 aaPredicted RBP13.43□□□□□ -0.26
NDC80-204ENST00000575515 STYK1Q6J9G0 422 aa13.43□□□□□ -0.26
NDC80-204ENST00000575515 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
NDC80-204ENST00000575515 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
NDC80-204ENST00000575515 RNF123Q5XPI4 1314 aa13.42□□□□□ -0.26
NDC80-204ENST00000575515 EIF5P55010 431 aaKnown RBP13.42□□□□□ -0.26
NDC80-204ENST00000575515 CCDC93Q567U6 631 aa13.42□□□□□ -0.26
NDC80-204ENST00000575515 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
NDC80-204ENST00000575515 PNMA8AQ86V59 439 aaPredicted RBP13.42□□□□□ -0.26
NDC80-204ENST00000575515 TTC5Q8N0Z6 440 aa13.42□□□□□ -0.26
NDC80-204ENST00000575515 CNTROBQ8N137 903 aa13.42□□□□□ -0.26
NDC80-204ENST00000575515 MASTLQ96GX5 879 aa13.42□□□□□ -0.26
NDC80-204ENST00000575515 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
NDC80-204ENST00000575515 SRGNP10124 158 aa13.41□□□□□ -0.26
NDC80-204ENST00000575515 SETDB2Q96T68 719 aa13.41□□□□□ -0.26
NDC80-204ENST00000575515 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
NDC80-204ENST00000575515 LTBP1Q14766 1721 aa13.4□□□□□ -0.26
NDC80-204ENST00000575515 CCER2I3L3R5 266 aa13.4□□□□□ -0.26
NDC80-204ENST00000575515 RGS19P49795 217 aa13.4□□□□□ -0.26
NDC80-204ENST00000575515 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
NDC80-204ENST00000575515 ZNF277Q9NRM2 450 aaPredicted RBP13.4□□□□□ -0.26
NDC80-204ENST00000575515 ECE1P42892 770 aa13.39□□□□□ -0.27
NDC80-204ENST00000575515 FKBP4Q02790 459 aaKnown RBP eCLIP13.39□□□□□ -0.27
NDC80-204ENST00000575515 CAPNS2Q96L46 248 aa13.39□□□□□ -0.27
NDC80-204ENST00000575515 TSKSQ9UJT2 592 aa13.39□□□□□ -0.27
NDC80-204ENST00000575515 PDE4DIPQ5VU43 2346 aa13.39□□□□□ -0.27
NDC80-204ENST00000575515 DDX21Q9NR30 783 aaKnown RBP eCLIP13.38□□□□□ -0.27
NDC80-204ENST00000575515 HMOX1P09601 288 aa13.37□□□□□ -0.27
NDC80-204ENST00000575515 IL13P35225 146 aa13.37□□□□□ -0.27
NDC80-204ENST00000575515 IL6STP40189 918 aaPredicted RBP13.37□□□□□ -0.27
NDC80-204ENST00000575515 CYP4F22Q6NT55 531 aa13.37□□□□□ -0.27
NDC80-204ENST00000575515 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
NDC80-204ENST00000575515 GPR101Q96P66 508 aaPredicted RBP13.37□□□□□ -0.27
NDC80-204ENST00000575515 HEG1Q9ULI3 1381 aa13.36□□□□□ -0.27
NDC80-204ENST00000575515 NPR1P16066 1061 aa13.36□□□□□ -0.27
NDC80-204ENST00000575515 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
NDC80-204ENST00000575515 GPC2Q8N158 579 aa13.36□□□□□ -0.27
NDC80-204ENST00000575515 ZNF496Q96IT1 587 aaPredicted RBP13.36□□□□□ -0.27
NDC80-204ENST00000575515 TEX13AQ9BXU3 409 aaPredicted RBP13.36□□□□□ -0.27
NDC80-204ENST00000575515 PANK3Q9H999 370 aa13.36□□□□□ -0.27
NDC80-204ENST00000575515 CAMTA2O94983 1202 aa13.35□□□□□ -0.27
NDC80-204ENST00000575515 IARSP41252 1262 aaKnown RBP13.35□□□□□ -0.27
NDC80-204ENST00000575515 OLFM4Q6UX06 510 aa13.35□□□□□ -0.27
NDC80-204ENST00000575515 DZIP3Q86Y13 1208 aaKnown RBP13.35□□□□□ -0.27
NDC80-204ENST00000575515 RTKN2Q8IZC4 609 aa13.35□□□□□ -0.27
NDC80-204ENST00000575515 C7orf43Q8WVR3 580 aa13.35□□□□□ -0.27
NDC80-204ENST00000575515 JDP2Q8WYK2 163 aa13.35□□□□□ -0.27
NDC80-204ENST00000575515 MCOLN1Q9GZU1 580 aa13.35□□□□□ -0.27
NDC80-204ENST00000575515 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
NDC80-204ENST00000575515 FZD9O00144 591 aa13.34□□□□□ -0.27
NDC80-204ENST00000575515 FMR1Q06787 632 aaKnown RBP eCLIP13.34□□□□□ -0.277e-7■■■□□ 14.8
NDC80-204ENST00000575515 TEFQ10587 303 aa13.34□□□□□ -0.27
NDC80-204ENST00000575515 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
NDC80-204ENST00000575515 TNRC18O15417 2968 aaPredicted RBP13.33□□□□□ -0.28
NDC80-204ENST00000575515 AOC2O75106 756 aa13.33□□□□□ -0.28
NDC80-204ENST00000575515 A1BGP04217 495 aa13.33□□□□□ -0.28
NDC80-204ENST00000575515 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
NDC80-204ENST00000575515 ZNF790Q6PG37 636 aa13.33□□□□□ -0.28
NDC80-204ENST00000575515 SYNE4Q8N205 404 aa13.33□□□□□ -0.28
NDC80-204ENST00000575515 DGKZQ13574 1117 aa13.32□□□□□ -0.28
NDC80-204ENST00000575515 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
NDC80-204ENST00000575515 FAM177BA6PVY3 158 aa13.31□□□□□ -0.28
NDC80-204ENST00000575515 TRAF5O00463 557 aa13.31□□□□□ -0.28
NDC80-204ENST00000575515 CA12O43570 354 aa13.31□□□□□ -0.28
NDC80-204ENST00000575515 MAP2K2P36507 400 aa13.31□□□□□ -0.28
NDC80-204ENST00000575515 FMNL2Q96PY5 1086 aa13.31□□□□□ -0.28
NDC80-204ENST00000575515 TLL2Q9Y6L7 1015 aa13.31□□□□□ -0.28
NDC80-204ENST00000575515 ALDH1B1P30837 517 aa13.3□□□□□ -0.28
NDC80-204ENST00000575515 PIP4K2AP48426 406 aaPredicted RBP13.3□□□□□ -0.28
NDC80-204ENST00000575515 TPTE2Q6XPS3 522 aa13.3□□□□□ -0.28
NDC80-204ENST00000575515 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
NDC80-204ENST00000575515 KNSTRNQ9Y448 316 aa13.3□□□□□ -0.28
NDC80-204ENST00000575515 COL4A5P29400 1685 aa13.3□□□□□ -0.28
NDC80-204ENST00000575515 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms