RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 MAP3K13O43283 966 aa13.2□□□□□ -0.3
RPA1-206ENST00000573994 BICDL1Q6ZP65 573 aa13.2□□□□□ -0.3
RPA1-206ENST00000573994 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
RPA1-206ENST00000573994 PNNQ9H307 717 aaKnown RBP13.2□□□□□ -0.3
RPA1-206ENST00000573994 USP16Q9Y5T5 823 aa13.2□□□□□ -0.3
RPA1-206ENST00000573994 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
RPA1-206ENST00000573994 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 A0A087WZG4 1122 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
RPA1-206ENST00000573994 TM4SF1P30408 202 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 TGFB2P61812 414 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 TAF7Q15545 349 aaPredicted RBP13.19□□□□□ -0.3
RPA1-206ENST00000573994 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 N4BP2Q86UW6 1770 aaPredicted RBP13.19□□□□□ -0.3
RPA1-206ENST00000573994 CHRNA5P30532 468 aa13.18□□□□□ -0.3
RPA1-206ENST00000573994 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
RPA1-206ENST00000573994 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
RPA1-206ENST00000573994 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
RPA1-206ENST00000573994 CARMIL3Q8ND23 1372 aa13.18□□□□□ -0.3
RPA1-206ENST00000573994 CHD4Q14839 1912 aa13.17□□□□□ -0.3
RPA1-206ENST00000573994 ATP10DQ9P241 1426 aa13.17□□□□□ -0.3
RPA1-206ENST00000573994 ATMINO43313 823 aaPredicted RBP13.17□□□□□ -0.3
RPA1-206ENST00000573994 CAMTA2O94983 1202 aa13.17□□□□□ -0.3
RPA1-206ENST00000573994 C7P10643 843 aa13.17□□□□□ -0.3
RPA1-206ENST00000573994 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
RPA1-206ENST00000573994 TBC1D9BQ66K14 1250 aa13.17□□□□□ -0.3
RPA1-206ENST00000573994 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
RPA1-206ENST00000573994 PRKRIP1Q9H875 184 aaPredicted RBP13.17□□□□□ -0.3
RPA1-206ENST00000573994 DLG5Q8TDM6 1919 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 SERPINB2P05120 415 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 KCNA3P22001 575 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 TIE1P35590 1138 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 RIPK4P57078 832 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 DZIP3Q86Y13 1208 aaKnown RBP13.16□□□□□ -0.3
RPA1-206ENST00000573994 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
RPA1-206ENST00000573994 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
RPA1-206ENST00000573994 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.3
RPA1-206ENST00000573994 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
RPA1-206ENST00000573994 PNISRQ8TF01 805 aaKnown RBP13.15□□□□□ -0.3
RPA1-206ENST00000573994 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.31
RPA1-206ENST00000573994 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
RPA1-206ENST00000573994 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
RPA1-206ENST00000573994 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
RPA1-206ENST00000573994 ZNF526Q8TF50 670 aaPredicted RBP13.14□□□□□ -0.31
RPA1-206ENST00000573994 TSPYL4Q9UJ04 414 aa13.14□□□□□ -0.31
RPA1-206ENST00000573994 ADCY9O60503 1353 aa13.14□□□□□ -0.31
RPA1-206ENST00000573994 NRXN2Q9P2S2 1712 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 LAMB4A4D0S4 1761 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 BCORQ6W2J9 1755 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 DALRD3Q5D0E6 543 aaKnown RBP13.13□□□□□ -0.31
RPA1-206ENST00000573994 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 PIM2Q9P1W9 311 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 AFDNP55196 1824 aaKnown RBP13.12□□□□□ -0.31
RPA1-206ENST00000573994 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
RPA1-206ENST00000573994 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 GSE1Q14687 1217 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 C2CD5Q86YS7 1000 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 RUNDC1Q96C34 613 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 BRCA1P38398 1863 aaKnown RBP13.11□□□□□ -0.31
RPA1-206ENST00000573994 NPHP1O15259 732 aa13.11□□□□□ -0.31
RPA1-206ENST00000573994 PRR5LQ6MZQ0 368 aa13.11□□□□□ -0.31
RPA1-206ENST00000573994 CNBD1Q8NA66 436 aa13.11□□□□□ -0.31
RPA1-206ENST00000573994 SETDB2Q96T68 719 aa13.11□□□□□ -0.31
RPA1-206ENST00000573994 MYL6BP14649 208 aa13.1□□□□□ -0.31
RPA1-206ENST00000573994 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
RPA1-206ENST00000573994 FAM177BA6PVY3 158 aa13.09□□□□□ -0.31
RPA1-206ENST00000573994 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
RPA1-206ENST00000573994 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
RPA1-206ENST00000573994 H0YIN7 160 aa13.08□□□□□ -0.32
RPA1-206ENST00000573994 ST5P78524 1137 aa13.08□□□□□ -0.32
RPA1-206ENST00000573994 RASSF7Q02833 373 aa13.08□□□□□ -0.32
RPA1-206ENST00000573994 HLFQ16534 295 aa13.08□□□□□ -0.32
RPA1-206ENST00000573994 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
RPA1-206ENST00000573994 NBPF5PQ86XG9 351 aaPredicted RBP13.08□□□□□ -0.32
RPA1-206ENST00000573994 GPBP1L1Q9HC44 474 aaPredicted RBP13.08□□□□□ -0.32
RPA1-206ENST00000573994 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
RPA1-206ENST00000573994 NIP7Q9Y221 180 aaKnown RBP eCLIP13.08□□□□□ -0.32
RPA1-206ENST00000573994 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
RPA1-206ENST00000573994 ZNF316A6NFI3 1004 aaPredicted RBP13.07□□□□□ -0.32
RPA1-206ENST00000573994 ANXA1P04083 346 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
RPA1-206ENST00000573994 ATN1P54259 1190 aaPredicted RBP13.07□□□□□ -0.32
RPA1-206ENST00000573994 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 CLEC4GQ6UXB4 293 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 KIF6Q6ZMV9 814 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 TTLL7Q6ZT98 887 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 TTLL6Q8N841 843 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 NECTIN2Q92692 538 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 ZNF622Q969S3 477 aaKnown RBP eCLIP13.07□□□□□ -0.32
RPA1-206ENST00000573994 BRIP1Q9BX63 1249 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms