RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PASKQ96RG2 1323 aa16.51■□□□□ 0.23
PRPF8-208ENST00000573716 LBX1P52954 281 aa16.51■□□□□ 0.23
PRPF8-208ENST00000573716 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
PRPF8-208ENST00000573716 A1BGP04217 495 aa16.5■□□□□ 0.23
PRPF8-208ENST00000573716 SRGNP10124 158 aa16.5■□□□□ 0.23
PRPF8-208ENST00000573716 MASTLQ96GX5 879 aa16.5■□□□□ 0.23
PRPF8-208ENST00000573716 TEX13AQ9BXU3 409 aaPredicted RBP16.5■□□□□ 0.23
PRPF8-208ENST00000573716 IL6STP40189 918 aaPredicted RBP16.49■□□□□ 0.23
PRPF8-208ENST00000573716 TIMELESSQ9UNS1 1208 aa16.49■□□□□ 0.23
PRPF8-208ENST00000573716 ZNF541Q9H0D2 1346 aa16.48■□□□□ 0.23
PRPF8-208ENST00000573716 DIAPH1O60610 1272 aaKnown RBP16.48■□□□□ 0.23
PRPF8-208ENST00000573716 CAMTA2O94983 1202 aa16.48■□□□□ 0.23
PRPF8-208ENST00000573716 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
PRPF8-208ENST00000573716 ZNF790Q6PG37 636 aa16.48■□□□□ 0.23
PRPF8-208ENST00000573716 NBPF5PQ86XG9 351 aaPredicted RBP16.48■□□□□ 0.23
PRPF8-208ENST00000573716 L3MBTL3Q96JM7 780 aaPredicted RBP16.48■□□□□ 0.23
PRPF8-208ENST00000573716 ZNF277Q9NRM2 450 aaPredicted RBP16.48■□□□□ 0.23
PRPF8-208ENST00000573716 HACL1Q9UJ83 578 aa16.48■□□□□ 0.23
PRPF8-208ENST00000573716 BCORQ6W2J9 1755 aa16.47■□□□□ 0.23
PRPF8-208ENST00000573716 ITGBL1O95965 494 aaPredicted RBP16.47■□□□□ 0.23
PRPF8-208ENST00000573716 PIP4K2AP48426 406 aaPredicted RBP16.47■□□□□ 0.23
PRPF8-208ENST00000573716 DZIP3Q86Y13 1208 aaKnown RBP16.47■□□□□ 0.23
PRPF8-208ENST00000573716 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
PRPF8-208ENST00000573716 WBP1LQ9NX94 342 aa16.47■□□□□ 0.23
PRPF8-208ENST00000573716 U2SURPO15042 1029 aaKnown RBP16.46■□□□□ 0.23
PRPF8-208ENST00000573716 EPHX2P34913 555 aa16.46■□□□□ 0.23
PRPF8-208ENST00000573716 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
PRPF8-208ENST00000573716 MAP1SQ66K74 1059 aaPredicted RBP16.46■□□□□ 0.23
PRPF8-208ENST00000573716 OLFM4Q6UX06 510 aa16.46■□□□□ 0.23
PRPF8-208ENST00000573716 ABHD8Q96I13 439 aa16.46■□□□□ 0.23
PRPF8-208ENST00000573716 ABT1Q9ULW3 272 aaKnown RBP16.46■□□□□ 0.23
PRPF8-208ENST00000573716 SIPA1L3O60292 1781 aaPredicted RBP16.46■□□□□ 0.22
PRPF8-208ENST00000573716 FAM177BA6PVY3 158 aa16.45■□□□□ 0.22
PRPF8-208ENST00000573716 GNAT3A8MTJ3 354 aa16.45■□□□□ 0.22
PRPF8-208ENST00000573716 KCNA4P22459 653 aa16.45■□□□□ 0.22
PRPF8-208ENST00000573716 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRPF8-208ENST00000573716 DEFB115Q30KQ5 88 aa16.45■□□□□ 0.22
PRPF8-208ENST00000573716 FAM161AQ3B820 660 aa16.45■□□□□ 0.22
PRPF8-208ENST00000573716 IL17REQ8NFR9 667 aa16.45■□□□□ 0.22
PRPF8-208ENST00000573716 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
PRPF8-208ENST00000573716 HSPA8P11142 646 aaKnown RBP16.44■□□□□ 0.22
PRPF8-208ENST00000573716 NPR1P16066 1061 aa16.44■□□□□ 0.22
PRPF8-208ENST00000573716 GRM1Q13255 1194 aa16.44■□□□□ 0.22
PRPF8-208ENST00000573716 AMER1Q5JTC6 1135 aaPredicted RBP16.44■□□□□ 0.22
PRPF8-208ENST00000573716 PAXIP1Q6ZW49 1069 aaPredicted RBP16.44■□□□□ 0.22
PRPF8-208ENST00000573716 CNTROBQ8N137 903 aa16.44■□□□□ 0.22
PRPF8-208ENST00000573716 KCNQ3O43525 872 aa16.43■□□□□ 0.22
PRPF8-208ENST00000573716 CC2D1BQ5T0F9 858 aaKnown RBP16.43■□□□□ 0.22
PRPF8-208ENST00000573716 C7orf43Q8WVR3 580 aa16.43■□□□□ 0.22
PRPF8-208ENST00000573716 PCGF6Q9BYE7 350 aa16.43■□□□□ 0.22
PRPF8-208ENST00000573716 WDR33Q9C0J8 1336 aaKnown RBP16.43■□□□□ 0.22
PRPF8-208ENST00000573716 ADAMTSL1Q8N6G6 1762 aa16.42■□□□□ 0.22
PRPF8-208ENST00000573716 RASSF10A6NK89 507 aa16.42■□□□□ 0.22
PRPF8-208ENST00000573716 TRIM26Q12899 539 aaPredicted RBP16.42■□□□□ 0.22
PRPF8-208ENST00000573716 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
PRPF8-208ENST00000573716 GAS2L2Q8NHY3 880 aa16.42■□□□□ 0.22
PRPF8-208ENST00000573716 ZNF652Q9Y2D9 606 aa16.42■□□□□ 0.22
PRPF8-208ENST00000573716 CCDC85CA6NKD9 419 aa16.41■□□□□ 0.22
PRPF8-208ENST00000573716 BTBD11A6QL63 1104 aa16.41■□□□□ 0.22
PRPF8-208ENST00000573716 SLC34A2O95436 690 aa16.41■□□□□ 0.22
PRPF8-208ENST00000573716 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
PRPF8-208ENST00000573716 MAP2K1Q02750 393 aaPredicted RBP16.41■□□□□ 0.22
PRPF8-208ENST00000573716 RTKN2Q8IZC4 609 aa16.41■□□□□ 0.22
PRPF8-208ENST00000573716 SYNE4Q8N205 404 aa16.41■□□□□ 0.22
PRPF8-208ENST00000573716 GJA3Q9Y6H8 435 aa16.41■□□□□ 0.22
PRPF8-208ENST00000573716 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
PRPF8-208ENST00000573716 TPTE2Q6XPS3 522 aa16.4■□□□□ 0.22
PRPF8-208ENST00000573716 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
PRPF8-208ENST00000573716 BEGAINQ9BUH8 593 aa16.4■□□□□ 0.22
PRPF8-208ENST00000573716 NIP7Q9Y221 180 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRPF8-208ENST00000573716 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
PRPF8-208ENST00000573716 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
PRPF8-208ENST00000573716 JDP2Q8WYK2 163 aa16.39■□□□□ 0.21
PRPF8-208ENST00000573716 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
PRPF8-208ENST00000573716 CLEC4GQ6UXB4 293 aa16.38■□□□□ 0.21
PRPF8-208ENST00000573716 GPC2Q8N158 579 aa16.38■□□□□ 0.21
PRPF8-208ENST00000573716 FZD9O00144 591 aa16.37■□□□□ 0.21
PRPF8-208ENST00000573716 EIF6P56537 245 aaKnown RBP16.37■□□□□ 0.21
PRPF8-208ENST00000573716 FMR1Q06787 632 aaKnown RBP eCLIP16.37■□□□□ 0.212e-8■■■■■ 29
PRPF8-208ENST00000573716 CAPNS2Q96L46 248 aa16.37■□□□□ 0.21
PRPF8-208ENST00000573716 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
PRPF8-208ENST00000573716 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
PRPF8-208ENST00000573716 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
PRPF8-208ENST00000573716 MLLT1Q03111 559 aaPredicted RBP16.36■□□□□ 0.21
PRPF8-208ENST00000573716 CYP4F22Q6NT55 531 aa16.35■□□□□ 0.21
PRPF8-208ENST00000573716 TSKSQ9UJT2 592 aa16.35■□□□□ 0.21
PRPF8-208ENST00000573716 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
PRPF8-208ENST00000573716 TRPM7Q96QT4 1865 aa16.34■□□□□ 0.21
PRPF8-208ENST00000573716 KLRG2A4D1S0 409 aaPredicted RBP16.34■□□□□ 0.21
PRPF8-208ENST00000573716 SNRPA1P09661 255 aaKnown RBP16.34■□□□□ 0.21
PRPF8-208ENST00000573716 ECE1P42892 770 aa16.34■□□□□ 0.21
PRPF8-208ENST00000573716 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
PRPF8-208ENST00000573716 PHACTR3Q96KR7 559 aa16.34■□□□□ 0.21
PRPF8-208ENST00000573716 GPR101Q96P66 508 aaPredicted RBP16.34■□□□□ 0.21
PRPF8-208ENST00000573716 KIF7Q2M1P5 1343 aa16.34■□□□□ 0.21
PRPF8-208ENST00000573716 CEMIPQ8WUJ3 1361 aa16.34■□□□□ 0.21
PRPF8-208ENST00000573716 LTBP1Q14766 1721 aa16.33■□□□□ 0.21
PRPF8-208ENST00000573716 TRAF5O00463 557 aa16.33■□□□□ 0.2
PRPF8-208ENST00000573716 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.2
PRPF8-208ENST00000573716 PRKAR2BP31323 418 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms