RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 RASSF7Q02833 373 aa12.69□□□□□ -0.38
NPLOC4-212ENST00000573328 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
NPLOC4-212ENST00000573328 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-212ENST00000573328 NGEFQ8N5V2 710 aa12.69□□□□□ -0.38
NPLOC4-212ENST00000573328 TSPYL4Q9UJ04 414 aa12.69□□□□□ -0.38
NPLOC4-212ENST00000573328 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
NPLOC4-212ENST00000573328 FAM177BA6PVY3 158 aa12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 NBPF26B4DH59 902 aa12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 EIF4A1P60842 406 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 NBPF10Q6P3W6 841 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 CLEC4GQ6UXB4 293 aa12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 BRIP1Q9BX63 1249 aa12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 PDZRN3Q9UPQ7 1066 aa12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 RRP7AQ9Y3A4 280 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 ANKRD36CQ5JPF3 1778 aa12.68□□□□□ -0.38
NPLOC4-212ENST00000573328 MYL6BP14649 208 aa12.67□□□□□ -0.38
NPLOC4-212ENST00000573328 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-212ENST00000573328 KIF6Q6ZMV9 814 aa12.67□□□□□ -0.38
NPLOC4-212ENST00000573328 GTF2E1P29083 439 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-212ENST00000573328 KDM2BQ8NHM5 1336 aa12.65□□□□□ -0.38
NPLOC4-212ENST00000573328 KIF3CO14782 793 aa12.65□□□□□ -0.38
NPLOC4-212ENST00000573328 C16orf71Q8IYS4 520 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-212ENST00000573328 RUNDC1Q96C34 613 aa12.65□□□□□ -0.38
NPLOC4-212ENST00000573328 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-212ENST00000573328 NMRK2Q9NPI5 230 aa12.65□□□□□ -0.38
NPLOC4-212ENST00000573328 LAS1LQ9Y4W2 734 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-212ENST00000573328 C21orf2O43822 256 aa12.64□□□□□ -0.39
NPLOC4-212ENST00000573328 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
NPLOC4-212ENST00000573328 LMNB1P20700 586 aa12.64□□□□□ -0.39
NPLOC4-212ENST00000573328 HLFQ16534 295 aa12.64□□□□□ -0.39
NPLOC4-212ENST00000573328 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
NPLOC4-212ENST00000573328 CNKSR1Q969H4 720 aa12.64□□□□□ -0.39
NPLOC4-212ENST00000573328 ZBTB3Q9H5J0 574 aa12.64□□□□□ -0.39
NPLOC4-212ENST00000573328 MAP3K15Q6ZN16 1313 aa12.63□□□□□ -0.39
NPLOC4-212ENST00000573328 CEP350Q5VT06 3117 aa12.63□□□□□ -0.39
NPLOC4-212ENST00000573328 RGL2O15211 777 aa12.63□□□□□ -0.39
NPLOC4-212ENST00000573328 STYK1Q6J9G0 422 aa12.63□□□□□ -0.39
NPLOC4-212ENST00000573328 TTLL7Q6ZT98 887 aa12.63□□□□□ -0.39
NPLOC4-212ENST00000573328 MASTLQ96GX5 879 aa12.63□□□□□ -0.39
NPLOC4-212ENST00000573328 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 NFKBIEO00221 500 aa12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 SRGNP10124 158 aa12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 GPTP24298 496 aa12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 ZEB1P37275 1124 aaPredicted RBP12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 PRPF40BQ6NWY9 871 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 NECTIN2Q92692 538 aa12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 NYXQ9GZU5 481 aa12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 BABAM1Q9NWV8 329 aa12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 ADAMTS8Q9UP79 889 aa12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 ZC3H4Q9UPT8 1303 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-212ENST00000573328 ERVV-1B6SEH8 477 aa12.61□□□□□ -0.39
NPLOC4-212ENST00000573328 TOMM70O94826 608 aa12.61□□□□□ -0.39
NPLOC4-212ENST00000573328 NPR1P16066 1061 aa12.61□□□□□ -0.39
NPLOC4-212ENST00000573328 HSPA6P17066 643 aa12.61□□□□□ -0.39
NPLOC4-212ENST00000573328 WDR90Q96KV7 1748 aa12.61□□□□□ -0.39
NPLOC4-212ENST00000573328 LAMB2P55268 1798 aa12.61□□□□□ -0.39
NPLOC4-212ENST00000573328 ANXA1P04083 346 aa12.6□□□□□ -0.39
NPLOC4-212ENST00000573328 SOGA3Q5TF21 947 aa12.6□□□□□ -0.39
NPLOC4-212ENST00000573328 NUTM1Q86Y26 1132 aa12.6□□□□□ -0.39
NPLOC4-212ENST00000573328 TAOK3Q9H2K8 898 aa12.6□□□□□ -0.39
NPLOC4-212ENST00000573328 RRAGCQ9HB90 399 aa12.6□□□□□ -0.39
NPLOC4-212ENST00000573328 ABCC12Q96J65 1359 aa12.59□□□□□ -0.39
NPLOC4-212ENST00000573328 PRELPP51888 382 aa12.59□□□□□ -0.39
NPLOC4-212ENST00000573328 ERFEQ4G0M1 354 aa12.59□□□□□ -0.39
NPLOC4-212ENST00000573328 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
NPLOC4-212ENST00000573328 AIMP1Q12904 312 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-212ENST00000573328 PROSER3Q2NL68 480 aa12.58□□□□□ -0.4
NPLOC4-212ENST00000573328 CCDC93Q567U6 631 aa12.58□□□□□ -0.4
NPLOC4-212ENST00000573328 GIGYF2Q6Y7W6 1299 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-212ENST00000573328 RPGRQ92834 1020 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-212ENST00000573328 UBN2Q6ZU65 1347 aa12.58□□□□□ -0.4
NPLOC4-212ENST00000573328 IBTKQ9P2D0 1353 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-212ENST00000573328 GLTPD2A6NH11 291 aa12.57□□□□□ -0.4
NPLOC4-212ENST00000573328 ALDH1B1P30837 517 aa12.57□□□□□ -0.4
NPLOC4-212ENST00000573328 KRT24Q2M2I5 525 aa12.57□□□□□ -0.4
NPLOC4-212ENST00000573328 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
NPLOC4-212ENST00000573328 PPP1R42Q7Z4L9 355 aa12.57□□□□□ -0.4
NPLOC4-212ENST00000573328 RBM46Q8TBY0 533 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-212ENST00000573328 LTBP3Q9NS15 1303 aa12.57□□□□□ -0.4
NPLOC4-212ENST00000573328 RIC1Q4ADV7 1423 aa12.56□□□□□ -0.4
NPLOC4-212ENST00000573328 CHL1O00533 1208 aa12.56□□□□□ -0.4
NPLOC4-212ENST00000573328 APAF1O14727 1248 aa12.56□□□□□ -0.4
NPLOC4-212ENST00000573328 PDIA6Q15084 440 aa12.56□□□□□ -0.4
NPLOC4-212ENST00000573328 PARP10Q53GL7 1025 aa12.56□□□□□ -0.4
NPLOC4-212ENST00000573328 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
NPLOC4-212ENST00000573328 SUSD4Q5VX71 490 aa12.56□□□□□ -0.4
NPLOC4-212ENST00000573328 XAGE3Q8WTP9 111 aa12.56□□□□□ -0.4
NPLOC4-212ENST00000573328 SCN4AP35499 1836 aa12.55□□□□□ -0.4
NPLOC4-212ENST00000573328 KLRG2A4D1S0 409 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-212ENST00000573328 NTSR2O95665 410 aa12.55□□□□□ -0.4
NPLOC4-212ENST00000573328 APLP1P51693 650 aa12.55□□□□□ -0.4
NPLOC4-212ENST00000573328 HSP90AB3PQ58FF7 597 aa12.55□□□□□ -0.4
NPLOC4-212ENST00000573328 COPS6Q7L5N1 327 aa12.55□□□□□ -0.4
NPLOC4-212ENST00000573328 ZNF34Q8IZ26 560 aa12.55□□□□□ -0.4
NPLOC4-212ENST00000573328 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
NPLOC4-212ENST00000573328 DDX21Q9NR30 783 aaKnown RBP eCLIP12.55□□□□□ -0.4
NPLOC4-212ENST00000573328 CHPF2Q9P2E5 772 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms