RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PRR20CP86479 221 aa8.74□□□□□ -1.01
SF3B3-214ENST00000572365 PRR20DP86480 221 aa8.74□□□□□ -1.01
SF3B3-214ENST00000572365 PRR20BP86481 221 aa8.74□□□□□ -1.01
SF3B3-214ENST00000572365 PRR20AP86496 221 aa8.74□□□□□ -1.01
SF3B3-214ENST00000572365 TNS4Q8IZW8 715 aa8.74□□□□□ -1.01
SF3B3-214ENST00000572365 CYP4X1Q8N118 509 aa8.74□□□□□ -1.01
SF3B3-214ENST00000572365 KDF1Q8NAX2 398 aaPredicted RBP8.74□□□□□ -1.01
SF3B3-214ENST00000572365 ITPKCQ96DU7 683 aa8.74□□□□□ -1.01
SF3B3-214ENST00000572365 CFAP74Q9C0B2 1584 aa8.73□□□□□ -1.01
SF3B3-214ENST00000572365 SMPD1P17405 629 aa8.73□□□□□ -1.01
SF3B3-214ENST00000572365 SCNN1AP37088 669 aa8.73□□□□□ -1.01
SF3B3-214ENST00000572365 MFAP1P55081 439 aaKnown RBP8.73□□□□□ -1.01
SF3B3-214ENST00000572365 MTFR1Q15390 333 aa8.73□□□□□ -1.01
SF3B3-214ENST00000572365 EFCAB2Q5VUJ9 269 aa8.73□□□□□ -1.01
SF3B3-214ENST00000572365 TRIM67Q6ZTA4 783 aa8.73□□□□□ -1.01
SF3B3-214ENST00000572365 XAGE2Q96GT9 111 aa8.73□□□□□ -1.01
SF3B3-214ENST00000572365 ARHGEF10LQ9HCE6 1279 aa8.73□□□□□ -1.01
SF3B3-214ENST00000572365 SERTAD1Q9UHV2 236 aa8.73□□□□□ -1.01
SF3B3-214ENST00000572365 MTMR7Q9Y216 660 aa8.73□□□□□ -1.01
SF3B3-214ENST00000572365 TNFRSF10AO00220 468 aa8.72□□□□□ -1.01
SF3B3-214ENST00000572365 ZIC2O95409 532 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-214ENST00000572365 IL2RAP01589 272 aa8.72□□□□□ -1.01
SF3B3-214ENST00000572365 FOXK2Q01167 660 aa8.72□□□□□ -1.01
SF3B3-214ENST00000572365 CBLBQ13191 982 aa8.72□□□□□ -1.01
SF3B3-214ENST00000572365 FKBP5Q13451 457 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-214ENST00000572365 GAS2L2Q8NHY3 880 aa8.72□□□□□ -1.01
SF3B3-214ENST00000572365 COL26A1Q96A83 441 aa8.72□□□□□ -1.01
SF3B3-214ENST00000572365 RAB6BQ9NRW1 208 aa8.72□□□□□ -1.01
SF3B3-214ENST00000572365 HRH3Q9Y5N1 445 aa8.72□□□□□ -1.01
SF3B3-214ENST00000572365 ZMYM3Q14202 1370 aa8.72□□□□□ -1.01
SF3B3-214ENST00000572365 CDK13Q14004 1512 aaKnown RBP8.71□□□□□ -1.01
SF3B3-214ENST00000572365 FOXO3O43524 673 aa8.71□□□□□ -1.02
SF3B3-214ENST00000572365 C21orf2O43822 256 aa8.71□□□□□ -1.02
SF3B3-214ENST00000572365 TIMP2P16035 220 aa8.71□□□□□ -1.02
SF3B3-214ENST00000572365 SERPINB4P48594 390 aa8.71□□□□□ -1.02
SF3B3-214ENST00000572365 SMTNP53814 917 aa8.71□□□□□ -1.02
SF3B3-214ENST00000572365 WDR4P57081 412 aaKnown RBP8.71□□□□□ -1.02
SF3B3-214ENST00000572365 CLN3Q13286 438 aa8.71□□□□□ -1.02
SF3B3-214ENST00000572365 ESYT1Q9BSJ8 1104 aa8.71□□□□□ -1.02
SF3B3-214ENST00000572365 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
SF3B3-214ENST00000572365 SCHIP1Q9P0W5 487 aaPredicted RBP8.71□□□□□ -1.02
SF3B3-214ENST00000572365 PLCH2O75038 1416 aa8.71□□□□□ -1.02
SF3B3-214ENST00000572365 A0A1W2PRU2 124 aa8.7□□□□□ -1.02
SF3B3-214ENST00000572365 SOWAHDA6NJG2 315 aa8.7□□□□□ -1.02
SF3B3-214ENST00000572365 A6NJY4 79 aa8.7□□□□□ -1.02
SF3B3-214ENST00000572365 PTGIRP43119 386 aa8.7□□□□□ -1.02
SF3B3-214ENST00000572365 SCG3Q8WXD2 468 aaKnown RBP8.7□□□□□ -1.02
SF3B3-214ENST00000572365 CNKSR1Q969H4 720 aa8.7□□□□□ -1.02
SF3B3-214ENST00000572365 PURBQ96QR8 312 aaKnown RBP8.7□□□□□ -1.02
SF3B3-214ENST00000572365 TSPAN10Q9H1Z9 355 aaPredicted RBP8.7□□□□□ -1.02
SF3B3-214ENST00000572365 EGFL7Q9UHF1 273 aa8.7□□□□□ -1.02
SF3B3-214ENST00000572365 ATAD2Q6PL18 1390 aa8.7□□□□□ -1.02
SF3B3-214ENST00000572365 DIP2CQ9Y2E4 1556 aa8.69□□□□□ -1.02
SF3B3-214ENST00000572365 ALKQ9UM73 1620 aa8.69□□□□□ -1.02
SF3B3-214ENST00000572365 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
SF3B3-214ENST00000572365 CCDC27Q2M243 656 aa8.69□□□□□ -1.02
SF3B3-214ENST00000572365 GGT6Q6P531 493 aa8.69□□□□□ -1.02
SF3B3-214ENST00000572365 STAG2Q8N3U4 1231 aa8.69□□□□□ -1.02
SF3B3-214ENST00000572365 RGS22Q8NE09 1264 aa8.69□□□□□ -1.02
SF3B3-214ENST00000572365 ABCA6Q8N139 1617 aa8.69□□□□□ -1.02
SF3B3-214ENST00000572365 CDK2AP1O14519 115 aa8.68□□□□□ -1.02
SF3B3-214ENST00000572365 SEPT3Q9UH03 358 aa8.68□□□□□ -1.02
SF3B3-214ENST00000572365 IQSEC3Q9UPP2 1182 aaPredicted RBP8.68□□□□□ -1.02
SF3B3-214ENST00000572365 CLTCQ00610 1675 aaKnown RBP8.68□□□□□ -1.02
SF3B3-214ENST00000572365 TLR1Q15399 786 aa8.67□□□□□ -1.02
SF3B3-214ENST00000572365 CAPN12Q6ZSI9 719 aa8.67□□□□□ -1.02
SF3B3-214ENST00000572365 SLC9A9Q8IVB4 645 aa8.67□□□□□ -1.02
SF3B3-214ENST00000572365 AGBL1Q96MI9 1066 aa8.67□□□□□ -1.02
SF3B3-214ENST00000572365 MKNK1Q9BUB5 465 aa8.67□□□□□ -1.02
SF3B3-214ENST00000572365 FHDC1Q9C0D6 1143 aaPredicted RBP8.67□□□□□ -1.02
SF3B3-214ENST00000572365 SHANK2Q9UPX8 1470 aa8.67□□□□□ -1.02
SF3B3-214ENST00000572365 MYO5CQ9NQX4 1742 aa8.66□□□□□ -1.02
SF3B3-214ENST00000572365 RGS20O76081 388 aa8.66□□□□□ -1.02
SF3B3-214ENST00000572365 CENPCQ03188 943 aa8.66□□□□□ -1.02
SF3B3-214ENST00000572365 MEIOBQ8N635 442 aa8.66□□□□□ -1.02
SF3B3-214ENST00000572365 GTF3C2Q8WUA4 911 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-214ENST00000572365 HPS1Q92902 700 aa8.66□□□□□ -1.02
SF3B3-214ENST00000572365 C2orf49Q9BVC5 232 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-214ENST00000572365 SAMD9Q5K651 1589 aa8.65□□□□□ -1.02
SF3B3-214ENST00000572365 ARHGAP5Q13017 1502 aa8.65□□□□□ -1.02
SF3B3-214ENST00000572365 PPP1R12BO60237 982 aaPredicted RBP8.65□□□□□ -1.02
SF3B3-214ENST00000572365 ICMTO60725 284 aa8.65□□□□□ -1.02
SF3B3-214ENST00000572365 PSMA6P60900 246 aaKnown RBP8.65□□□□□ -1.02
SF3B3-214ENST00000572365 RELBQ01201 579 aa8.65□□□□□ -1.02
SF3B3-214ENST00000572365 ZNF295-AS1Q8N0V1 137 aa8.65□□□□□ -1.02
SF3B3-214ENST00000572365 USP3Q9Y6I4 520 aa8.65□□□□□ -1.02
SF3B3-214ENST00000572365 STRCP1A6NGW2 1772 aa8.65□□□□□ -1.02
SF3B3-214ENST00000572365 KIF14Q15058 1648 aa8.65□□□□□ -1.03
SF3B3-214ENST00000572365 PRXQ9BXM0 1461 aa8.64□□□□□ -1.03
SF3B3-214ENST00000572365 ABL1P00519 1130 aa8.64□□□□□ -1.03
SF3B3-214ENST00000572365 TBCELQ5QJ74 424 aa8.64□□□□□ -1.03
SF3B3-214ENST00000572365 NBPF15Q8N660 670 aa8.64□□□□□ -1.03
SF3B3-214ENST00000572365 NLRP3Q96P20 1036 aa8.64□□□□□ -1.03
SF3B3-214ENST00000572365 DNMT3AQ9Y6K1 912 aaPredicted RBP8.64□□□□□ -1.03
SF3B3-214ENST00000572365 MYO3AQ8NEV4 1616 aa8.64□□□□□ -1.03
SF3B3-214ENST00000572365 TCOF1Q13428 1488 aaKnown RBP8.64□□□□□ -1.03
SF3B3-214ENST00000572365 ZNF518AQ6AHZ1 1483 aa8.64□□□□□ -1.03
SF3B3-214ENST00000572365 CFAP65Q6ZU64 1925 aaKnown RBP8.63□□□□□ -1.03
SF3B3-214ENST00000572365 MEN1O00255 615 aa8.63□□□□□ -1.03
SF3B3-214ENST00000572365 HIRAP54198 1017 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms