RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 TM4SF1P30408 202 aa15.38■□□□□ 0.05
TRIM25-205ENST00000572021 HNRNPUQ00839 825 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRIM25-205ENST00000572021 GOLGA2Q08379 1002 aa15.38■□□□□ 0.05
TRIM25-205ENST00000572021 TWISTNBQ3B726 338 aaPredicted RBP15.38■□□□□ 0.05
TRIM25-205ENST00000572021 XAGE3Q8WTP9 111 aa15.38■□□□□ 0.05
TRIM25-205ENST00000572021 DDX21Q9NR30 783 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRIM25-205ENST00000572021 PARP3Q9Y6F1 533 aa15.38■□□□□ 0.05
TRIM25-205ENST00000572021 POLRMTO00411 1230 aaKnown RBP15.37■□□□□ 0.05
TRIM25-205ENST00000572021 COPS6Q7L5N1 327 aa15.37■□□□□ 0.05
TRIM25-205ENST00000572021 NLGN2Q8NFZ4 835 aa15.37■□□□□ 0.05
TRIM25-205ENST00000572021 SYT17Q9BSW7 474 aa15.37■□□□□ 0.05
TRIM25-205ENST00000572021 MYH16Q9H6N6 1097 aa15.37■□□□□ 0.05
TRIM25-205ENST00000572021 AFDNP55196 1824 aaKnown RBP15.37■□□□□ 0.05
TRIM25-205ENST00000572021 NUP98P52948 1817 aa15.37■□□□□ 0.05
TRIM25-205ENST00000572021 KIF6Q6ZMV9 814 aa15.36■□□□□ 0.05
TRIM25-205ENST00000572021 MAP3K15Q6ZN16 1313 aa15.36■□□□□ 0.05
TRIM25-205ENST00000572021 DBF4Q9UBU7 674 aaPredicted RBP15.36■□□□□ 0.05
TRIM25-205ENST00000572021 SLFN5Q08AF3 891 aa15.35■□□□□ 0.05
TRIM25-205ENST00000572021 CCDC24Q8N4L8 307 aa15.35■□□□□ 0.05
TRIM25-205ENST00000572021 PHAXQ9H814 394 aaKnown RBP15.35■□□□□ 0.05
TRIM25-205ENST00000572021 FAM177BA6PVY3 158 aa15.34■□□□□ 0.05
TRIM25-205ENST00000572021 SERPINB2P05120 415 aa15.34■□□□□ 0.05
TRIM25-205ENST00000572021 CCDC30Q5VVM6 783 aa15.34■□□□□ 0.05
TRIM25-205ENST00000572021 ZNF428Q96B54 188 aa15.34■□□□□ 0.05
TRIM25-205ENST00000572021 WWC3Q9ULE0 1092 aa15.34■□□□□ 0.05
TRIM25-205ENST00000572021 GOLGB1Q14789 3259 aaKnown RBP15.33■□□□□ 0.05
TRIM25-205ENST00000572021 E9PSI1 815 aa15.33■□□□□ 0.05
TRIM25-205ENST00000572021 VAMP4O75379 141 aa15.33■□□□□ 0.05
TRIM25-205ENST00000572021 GPTP24298 496 aa15.33■□□□□ 0.05
TRIM25-205ENST00000572021 SETDB2Q96T68 719 aa15.33■□□□□ 0.05
TRIM25-205ENST00000572021 NIP7Q9Y221 180 aaKnown RBP eCLIP15.33■□□□□ 0.05
TRIM25-205ENST00000572021 ZNF652Q9Y2D9 606 aa15.33■□□□□ 0.05
TRIM25-205ENST00000572021 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
TRIM25-205ENST00000572021 CLEC4GQ6UXB4 293 aa15.32■□□□□ 0.04
TRIM25-205ENST00000572021 HYPKQ9NX55 129 aa15.32■□□□□ 0.04
TRIM25-205ENST00000572021 N4BP2Q86UW6 1770 aaPredicted RBP15.32■□□□□ 0.04
TRIM25-205ENST00000572021 C10orf71Q711Q0 1435 aa15.32■□□□□ 0.04
TRIM25-205ENST00000572021 NRXN2Q9P2S2 1712 aa15.32■□□□□ 0.04
TRIM25-205ENST00000572021 CD2APQ9Y5K6 639 aa15.32■□□□□ 0.04
TRIM25-205ENST00000572021 KIF13BQ9NQT8 1826 aa15.32■□□□□ 0.04
TRIM25-205ENST00000572021 CARMIL3Q8ND23 1372 aa15.31■□□□□ 0.04
TRIM25-205ENST00000572021 GIGYF2Q6Y7W6 1299 aaKnown RBP15.31■□□□□ 0.04
TRIM25-205ENST00000572021 G2E3Q7L622 706 aa15.31■□□□□ 0.04
TRIM25-205ENST00000572021 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
TRIM25-205ENST00000572021 NPHP1O15259 732 aa15.3■□□□□ 0.04
TRIM25-205ENST00000572021 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
TRIM25-205ENST00000572021 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
TRIM25-205ENST00000572021 KIAA1551Q9HCM1 1747 aa15.3■□□□□ 0.04
TRIM25-205ENST00000572021 UBN2Q6ZU65 1347 aa15.3■□□□□ 0.04
TRIM25-205ENST00000572021 ARFGEF2Q9Y6D5 1785 aa15.3■□□□□ 0.04
TRIM25-205ENST00000572021 A0A0G2JLW4 131 aa15.29■□□□□ 0.04
TRIM25-205ENST00000572021 PRR5LQ6MZQ0 368 aa15.29■□□□□ 0.04
TRIM25-205ENST00000572021 ANKRD13DQ6ZTN6 518 aa15.29■□□□□ 0.04
TRIM25-205ENST00000572021 NBPF5PQ86XG9 351 aaPredicted RBP15.29■□□□□ 0.04
TRIM25-205ENST00000572021 TRMT2AQ8IZ69 625 aaKnown RBP15.29■□□□□ 0.04
TRIM25-205ENST00000572021 ANKRD36CQ5JPF3 1778 aa15.29■□□□□ 0.04
TRIM25-205ENST00000572021 ANKRD31Q8N7Z5 1873 aa15.29■□□□□ 0.04
TRIM25-205ENST00000572021 CNBD1Q8NA66 436 aa15.28■□□□□ 0.04
TRIM25-205ENST00000572021 PLBD2Q8NHP8 589 aa15.28■□□□□ 0.04
TRIM25-205ENST00000572021 ATP10DQ9P241 1426 aa15.28■□□□□ 0.04
TRIM25-205ENST00000572021 PXDNLA1KZ92 1463 aa15.28■□□□□ 0.04
TRIM25-205ENST00000572021 DPEP1P16444 411 aa15.28■□□□□ 0.04
TRIM25-205ENST00000572021 CHRNA5P30532 468 aa15.28■□□□□ 0.04
TRIM25-205ENST00000572021 RIC3Q7Z5B4 369 aa15.28■□□□□ 0.04
TRIM25-205ENST00000572021 ZNF34Q8IZ26 560 aa15.28■□□□□ 0.04
TRIM25-205ENST00000572021 ATP5J2-PTCD1G3V325 749 aa15.27■□□□□ 0.03
TRIM25-205ENST00000572021 SUSD4Q5VX71 490 aa15.27■□□□□ 0.03
TRIM25-205ENST00000572021 NUTM1Q86Y26 1132 aa15.27■□□□□ 0.03
TRIM25-205ENST00000572021 CHMP4AQ9BY43 222 aa15.27■□□□□ 0.03
TRIM25-205ENST00000572021 RGL2O15211 777 aa15.26■□□□□ 0.03
TRIM25-205ENST00000572021 TCIRG1Q13488 830 aa15.26■□□□□ 0.03
TRIM25-205ENST00000572021 FLIIQ13045 1269 aa15.25■□□□□ 0.03
TRIM25-205ENST00000572021 BCL2L13Q9BXK5 485 aa15.25■□□□□ 0.03
TRIM25-205ENST00000572021 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
TRIM25-205ENST00000572021 ADCY9O60503 1353 aa15.25■□□□□ 0.03
TRIM25-205ENST00000572021 ZBED9Q6R2W3 1325 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 CACNA1FO60840 1977 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 PI4KAP2A4QPH2 592 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 YBX3P16989 372 aaKnown RBP eCLIP15.24■□□□□ 0.03
TRIM25-205ENST00000572021 GTF2E1P29083 439 aaPredicted RBP15.24■□□□□ 0.03
TRIM25-205ENST00000572021 TGFB2P61812 414 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 ST5P78524 1137 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 GPR162Q16538 588 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 ERFEQ4G0M1 354 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 TPTE2Q6XPS3 522 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 NLRP10Q86W26 655 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 SYNE4Q8N205 404 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 PI4KAP1Q8N8J0 262 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 MYD88Q99836 296 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 UTRNP46939 3433 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 COL11A2P13942 1736 aaPredicted RBP15.24■□□□□ 0.03
TRIM25-205ENST00000572021 ABCC12Q96J65 1359 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 NTSR2O95665 410 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
TRIM25-205ENST00000572021 KCNA3P22001 575 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 FKBP5Q13451 457 aaPredicted RBP15.24■□□□□ 0.03
TRIM25-205ENST00000572021 C2CD5Q86YS7 1000 aa15.24■□□□□ 0.03
TRIM25-205ENST00000572021 TNRC6CQ9HCJ0 1690 aaKnown RBP15.23■□□□□ 0.03
TRIM25-205ENST00000572021 HSP90AB3PQ58FF7 597 aa15.23■□□□□ 0.03
TRIM25-205ENST00000572021 KSR2Q6VAB6 950 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms