RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 CHL1O00533 1208 aa26.37■■□□□ 1.81
ABCA3-206ENST00000569062 APAF1O14727 1248 aa26.37■■□□□ 1.81
ABCA3-206ENST00000569062 EIF2S2P20042 333 aaKnown RBP26.36■■□□□ 1.81
ABCA3-206ENST00000569062 CNBD1Q8NA66 436 aa26.36■■□□□ 1.81
ABCA3-206ENST00000569062 H0YIN7 160 aa26.35■■□□□ 1.81
ABCA3-206ENST00000569062 TTLL7Q6ZT98 887 aa26.35■■□□□ 1.81
ABCA3-206ENST00000569062 BRIP1Q9BX63 1249 aa26.35■■□□□ 1.81
ABCA3-206ENST00000569062 NIP7Q9Y221 180 aaKnown RBP eCLIP26.35■■□□□ 1.81
ABCA3-206ENST00000569062 RGL2O15211 777 aa26.34■■□□□ 1.81
ABCA3-206ENST00000569062 NPHP1O15259 732 aa26.34■■□□□ 1.81
ABCA3-206ENST00000569062 KRT24Q2M2I5 525 aa26.34■■□□□ 1.81
ABCA3-206ENST00000569062 PDE6BP35913 854 aa26.33■■□□□ 1.81
ABCA3-206ENST00000569062 PDIA6Q15084 440 aa26.33■■□□□ 1.81
ABCA3-206ENST00000569062 NBPF5PQ86XG9 351 aaPredicted RBP26.33■■□□□ 1.81
ABCA3-206ENST00000569062 ERBB4Q15303 1308 aa26.33■■□□□ 1.81
ABCA3-206ENST00000569062 ANP32CO43423 234 aa26.32■■□□□ 1.8
ABCA3-206ENST00000569062 ST5P78524 1137 aa26.32■■□□□ 1.8
ABCA3-206ENST00000569062 TTLL6Q8N841 843 aa26.32■■□□□ 1.8
ABCA3-206ENST00000569062 MAP3K15Q6ZN16 1313 aa26.32■■□□□ 1.8
ABCA3-206ENST00000569062 CACNA1SQ13698 1873 aa26.32■■□□□ 1.8
ABCA3-206ENST00000569062 ERVV-1B6SEH8 477 aa26.31■■□□□ 1.8
ABCA3-206ENST00000569062 KIF6Q6ZMV9 814 aa26.31■■□□□ 1.8
ABCA3-206ENST00000569062 LRP10Q7Z4F1 713 aa26.31■■□□□ 1.8
ABCA3-206ENST00000569062 NECTIN2Q92692 538 aa26.31■■□□□ 1.8
ABCA3-206ENST00000569062 SBF1O95248 1867 aa26.31■■□□□ 1.8
ABCA3-206ENST00000569062 FAM177BA6PVY3 158 aa26.3■■□□□ 1.8
ABCA3-206ENST00000569062 ANXA1P04083 346 aa26.3■■□□□ 1.8
ABCA3-206ENST00000569062 PROSER3Q2NL68 480 aa26.3■■□□□ 1.8
ABCA3-206ENST00000569062 ZNF526Q8TF50 670 aaPredicted RBP26.3■■□□□ 1.8
ABCA3-206ENST00000569062 ZNF622Q969S3 477 aaKnown RBP eCLIP26.3■■□□□ 1.8
ABCA3-206ENST00000569062 CFAP44Q96MT7 982 aa26.3■■□□□ 1.8
ABCA3-206ENST00000569062 ZBTB3Q9H5J0 574 aa26.3■■□□□ 1.8
ABCA3-206ENST00000569062 PDZRN3Q9UPQ7 1066 aa26.29■■□□□ 1.8
ABCA3-206ENST00000569062 TPTE2Q6XPS3 522 aa26.27■■□□□ 1.8
ABCA3-206ENST00000569062 MRS2Q9HD23 443 aa26.27■■□□□ 1.8
ABCA3-206ENST00000569062 MBIPQ9NS73 344 aa26.27■■□□□ 1.8
ABCA3-206ENST00000569062 SENP3-EIF4A1A0A087X0R7 540 aa26.26■■□□□ 1.79
ABCA3-206ENST00000569062 GPBP1L1Q9HC44 474 aaPredicted RBP26.26■■□□□ 1.79
ABCA3-206ENST00000569062 ZNF853P0CG23 659 aa26.25■■□□□ 1.79
ABCA3-206ENST00000569062 SRGNP10124 158 aa26.25■■□□□ 1.79
ABCA3-206ENST00000569062 C9orf131Q5VYM1 1079 aa26.25■■□□□ 1.79
ABCA3-206ENST00000569062 SLX4Q8IY92 1834 aa26.25■■□□□ 1.79
ABCA3-206ENST00000569062 ARFGEF2Q9Y6D5 1785 aa26.25■■□□□ 1.79
ABCA3-206ENST00000569062 CCDC88AQ3V6T2 1871 aa26.24■■□□□ 1.79
ABCA3-206ENST00000569062 GPTP24298 496 aa26.24■■□□□ 1.79
ABCA3-206ENST00000569062 RASSF7Q02833 373 aa26.24■■□□□ 1.79
ABCA3-206ENST00000569062 UBN2Q6ZU65 1347 aa26.23■■□□□ 1.79
ABCA3-206ENST00000569062 TNRC6CQ9HCJ0 1690 aaKnown RBP26.23■■□□□ 1.79
ABCA3-206ENST00000569062 GIGYF2Q6Y7W6 1299 aaKnown RBP26.23■■□□□ 1.79
ABCA3-206ENST00000569062 IFT57Q9NWB7 429 aa26.23■■□□□ 1.79
ABCA3-206ENST00000569062 STYK1Q6J9G0 422 aa26.22■■□□□ 1.79
ABCA3-206ENST00000569062 COPS6Q7L5N1 327 aa26.22■■□□□ 1.79
ABCA3-206ENST00000569062 ZNF34Q8IZ26 560 aa26.22■■□□□ 1.79
ABCA3-206ENST00000569062 MASTLQ96GX5 879 aa26.22■■□□□ 1.79
ABCA3-206ENST00000569062 RNF181Q9P0P0 153 aa26.22■■□□□ 1.79
ABCA3-206ENST00000569062 ZNF219Q9P2Y4 722 aaPredicted RBP26.22■■□□□ 1.79
ABCA3-206ENST00000569062 ANKRD36CQ5JPF3 1778 aa26.21■■□□□ 1.79
ABCA3-206ENST00000569062 GTF2E1P29083 439 aaPredicted RBP26.21■■□□□ 1.79
ABCA3-206ENST00000569062 C1QTNF8P60827 252 aa26.21■■□□□ 1.79
ABCA3-206ENST00000569062 GNAI1P63096 354 aa26.21■■□□□ 1.79
ABCA3-206ENST00000569062 AIMP1Q12904 312 aaKnown RBP26.21■■□□□ 1.79
ABCA3-206ENST00000569062 HDGFL1Q5TGJ6 251 aa26.21■■□□□ 1.79
ABCA3-206ENST00000569062 NUTM1Q86Y26 1132 aa26.21■■□□□ 1.79
ABCA3-206ENST00000569062 XAGE3Q8WTP9 111 aa26.21■■□□□ 1.79
ABCA3-206ENST00000569062 DDX21Q9NR30 783 aaKnown RBP eCLIP26.21■■□□□ 1.79
ABCA3-206ENST00000569062 CHPF2Q9P2E5 772 aa26.21■■□□□ 1.79
ABCA3-206ENST00000569062 FER1L6Q2WGJ9 1857 aa26.21■■□□□ 1.79
ABCA3-206ENST00000569062 KLRG2A4D1S0 409 aaPredicted RBP26.2■■□□□ 1.78
ABCA3-206ENST00000569062 C21orf2O43822 256 aa26.2■■□□□ 1.78
ABCA3-206ENST00000569062 HOXB7P09629 217 aa26.2■■□□□ 1.78
ABCA3-206ENST00000569062 PRELPP51888 382 aa26.2■■□□□ 1.78
ABCA3-206ENST00000569062 CALD1Q05682 793 aaKnown RBP26.2■■□□□ 1.78
ABCA3-206ENST00000569062 SUSD4Q5VX71 490 aa26.2■■□□□ 1.78
ABCA3-206ENST00000569062 DUSP27Q5VZP5 1158 aa26.2■■□□□ 1.78
ABCA3-206ENST00000569062 CNKSR1Q969H4 720 aa26.2■■□□□ 1.78
ABCA3-206ENST00000569062 NYXQ9GZU5 481 aa26.2■■□□□ 1.78
ABCA3-206ENST00000569062 ABCC12Q96J65 1359 aa26.2■■□□□ 1.78
ABCA3-206ENST00000569062 ERFEQ4G0M1 354 aa26.19■■□□□ 1.78
ABCA3-206ENST00000569062 NFKBIEO00221 500 aa26.18■■□□□ 1.78
ABCA3-206ENST00000569062 PRPF40BQ6NWY9 871 aaKnown RBP26.18■■□□□ 1.78
ABCA3-206ENST00000569062 NPR1P16066 1061 aa26.17■■□□□ 1.78
ABCA3-206ENST00000569062 IBTKQ9P2D0 1353 aaPredicted RBP26.17■■□□□ 1.78
ABCA3-206ENST00000569062 ELL2O00472 640 aaPredicted RBP26.15■■□□□ 1.78
ABCA3-206ENST00000569062 NTSR2O95665 410 aa26.15■■□□□ 1.78
ABCA3-206ENST00000569062 DBF4Q9UBU7 674 aaPredicted RBP26.15■■□□□ 1.78
ABCA3-206ENST00000569062 TIAM2Q8IVF5 1701 aa26.14■■□□□ 1.78
ABCA3-206ENST00000569062 LMNB1P20700 586 aa26.14■■□□□ 1.78
ABCA3-206ENST00000569062 CCDC27Q2M243 656 aa26.14■■□□□ 1.78
ABCA3-206ENST00000569062 PARP10Q53GL7 1025 aa26.13■■□□□ 1.77
ABCA3-206ENST00000569062 PPP1R42Q7Z4L9 355 aa26.13■■□□□ 1.77
ABCA3-206ENST00000569062 WWC1Q8IX03 1113 aa26.13■■□□□ 1.77
ABCA3-206ENST00000569062 C8orf58Q8NAV2 365 aa26.13■■□□□ 1.77
ABCA3-206ENST00000569062 KIF3CO14782 793 aa26.12■■□□□ 1.77
ABCA3-206ENST00000569062 DICER1Q9UPY3 1922 aaKnown RBP26.12■■□□□ 1.77
ABCA3-206ENST00000569062 CRY2Q49AN0 593 aa26.11■■□□□ 1.77
ABCA3-206ENST00000569062 HSP90AB3PQ58FF7 597 aa26.11■■□□□ 1.77
ABCA3-206ENST00000569062 C7orf43Q8WVR3 580 aa26.11■■□□□ 1.77
ABCA3-206ENST00000569062 TSR2Q969E8 191 aaKnown RBP26.11■■□□□ 1.77
ABCA3-206ENST00000569062 RIC1Q4ADV7 1423 aa26.11■■□□□ 1.77
ABCA3-206ENST00000569062 TCIRG1Q13488 830 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms