RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TAF1DQ9H5J8 278 aaPredicted RBP16.88■□□□□ 0.29
SNX29-207ENST00000568949 CACNA1SQ13698 1873 aa16.88■□□□□ 0.29
SNX29-207ENST00000568949 NPHP1O15259 732 aa16.87■□□□□ 0.29
SNX29-207ENST00000568949 CAMTA2O94983 1202 aa16.87■□□□□ 0.29
SNX29-207ENST00000568949 CTCFP49711 727 aaPredicted RBP16.87■□□□□ 0.29
SNX29-207ENST00000568949 IL17REQ8NFR9 667 aa16.87■□□□□ 0.29
SNX29-207ENST00000568949 AIDAQ96BJ3 306 aa16.87■□□□□ 0.29
SNX29-207ENST00000568949 ZNF330Q9Y3S2 320 aaPredicted RBP16.87■□□□□ 0.29
SNX29-207ENST00000568949 TMEM88BA6NKF7 163 aa16.86■□□□□ 0.29
SNX29-207ENST00000568949 C7orf43Q8WVR3 580 aa16.86■□□□□ 0.29
SNX29-207ENST00000568949 FMNL2Q96PY5 1086 aa16.86■□□□□ 0.29
SNX29-207ENST00000568949 SIPA1L3O60292 1781 aaPredicted RBP16.86■□□□□ 0.29
SNX29-207ENST00000568949 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
SNX29-207ENST00000568949 ITGBL1O95965 494 aaPredicted RBP16.85■□□□□ 0.29
SNX29-207ENST00000568949 A1BGP04217 495 aa16.85■□□□□ 0.29
SNX29-207ENST00000568949 VEGFBP49765 207 aa16.85■□□□□ 0.29
SNX29-207ENST00000568949 CCDC93Q567U6 631 aa16.85■□□□□ 0.29
SNX29-207ENST00000568949 GAS2L2Q8NHY3 880 aa16.85■□□□□ 0.29
SNX29-207ENST00000568949 BCORQ6W2J9 1755 aa16.84■□□□□ 0.29
SNX29-207ENST00000568949 DZIP3Q86Y13 1208 aaKnown RBP16.84■□□□□ 0.29
SNX29-207ENST00000568949 WBP1LQ9NX94 342 aa16.84■□□□□ 0.29
SNX29-207ENST00000568949 CLEC4GQ6UXB4 293 aa16.83■□□□□ 0.28
SNX29-207ENST00000568949 NPR1P16066 1061 aa16.82■□□□□ 0.28
SNX29-207ENST00000568949 FKBP4Q02790 459 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNX29-207ENST00000568949 NBPF5PQ86XG9 351 aaPredicted RBP16.82■□□□□ 0.28
SNX29-207ENST00000568949 HACL1Q9UJ83 578 aa16.82■□□□□ 0.28
SNX29-207ENST00000568949 CEMIPQ8WUJ3 1361 aa16.81■□□□□ 0.28
SNX29-207ENST00000568949 KLRG2A4D1S0 409 aaPredicted RBP16.81■□□□□ 0.28
SNX29-207ENST00000568949 EAPPQ56P03 285 aaPredicted RBP16.81■□□□□ 0.28
SNX29-207ENST00000568949 ADAMTSL1Q8N6G6 1762 aa16.81■□□□□ 0.28
SNX29-207ENST00000568949 ZNF541Q9H0D2 1346 aa16.8■□□□□ 0.28
SNX29-207ENST00000568949 RGL2O15211 777 aa16.8■□□□□ 0.28
SNX29-207ENST00000568949 EPHX2P34913 555 aa16.8■□□□□ 0.28
SNX29-207ENST00000568949 LBX1P52954 281 aa16.8■□□□□ 0.28
SNX29-207ENST00000568949 PNMA8AQ86V59 439 aaPredicted RBP16.8■□□□□ 0.28
SNX29-207ENST00000568949 RTKN2Q8IZC4 609 aa16.8■□□□□ 0.28
SNX29-207ENST00000568949 ZNF652Q9Y2D9 606 aa16.8■□□□□ 0.28
SNX29-207ENST00000568949 RASSF10A6NK89 507 aa16.79■□□□□ 0.28
SNX29-207ENST00000568949 BTBD11A6QL63 1104 aa16.79■□□□□ 0.28
SNX29-207ENST00000568949 PER1O15534 1290 aaPredicted RBP16.79■□□□□ 0.28
SNX29-207ENST00000568949 DEFB115Q30KQ5 88 aa16.79■□□□□ 0.28
SNX29-207ENST00000568949 TPTE2Q6XPS3 522 aa16.79■□□□□ 0.28
SNX29-207ENST00000568949 ZNF277Q9NRM2 450 aaPredicted RBP16.79■□□□□ 0.28
SNX29-207ENST00000568949 CLEC11AQ9Y240 323 aa16.79■□□□□ 0.28
SNX29-207ENST00000568949 COL3A1P02461 1466 aaPredicted RBP16.79■□□□□ 0.28
SNX29-207ENST00000568949 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
SNX29-207ENST00000568949 KCNQ3O43525 872 aa16.78■□□□□ 0.28
SNX29-207ENST00000568949 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
SNX29-207ENST00000568949 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
SNX29-207ENST00000568949 FZD9O00144 591 aa16.77■□□□□ 0.28
SNX29-207ENST00000568949 HSPA8P11142 646 aaKnown RBP16.77■□□□□ 0.28
SNX29-207ENST00000568949 MAP2K1Q02750 393 aaPredicted RBP16.77■□□□□ 0.28
SNX29-207ENST00000568949 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.28
SNX29-207ENST00000568949 KIF7Q2M1P5 1343 aa16.76■□□□□ 0.27
SNX29-207ENST00000568949 ALDH1B1P30837 517 aa16.76■□□□□ 0.27
SNX29-207ENST00000568949 IARSP41252 1262 aaKnown RBP16.76■□□□□ 0.27
SNX29-207ENST00000568949 GPC2Q8N158 579 aa16.76■□□□□ 0.27
SNX29-207ENST00000568949 PCGF6Q9BYE7 350 aa16.76■□□□□ 0.27
SNX29-207ENST00000568949 RNF123Q5XPI4 1314 aa16.75■□□□□ 0.27
SNX29-207ENST00000568949 WDR33Q9C0J8 1336 aaKnown RBP16.75■□□□□ 0.27
SNX29-207ENST00000568949 SLC34A2O95436 690 aa16.75■□□□□ 0.27
SNX29-207ENST00000568949 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
SNX29-207ENST00000568949 PIP4K2AP48426 406 aaPredicted RBP16.75■□□□□ 0.27
SNX29-207ENST00000568949 MAP1SQ66K74 1059 aaPredicted RBP16.75■□□□□ 0.27
SNX29-207ENST00000568949 SYNE4Q8N205 404 aa16.75■□□□□ 0.27
SNX29-207ENST00000568949 ABHD8Q96I13 439 aa16.75■□□□□ 0.27
SNX29-207ENST00000568949 NIP7Q9Y221 180 aaKnown RBP eCLIP16.75■□□□□ 0.27
SNX29-207ENST00000568949 NPC1L1Q9UHC9 1359 aa16.75■□□□□ 0.27
SNX29-207ENST00000568949 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
SNX29-207ENST00000568949 PSMD1Q99460 953 aa16.74■□□□□ 0.27
SNX29-207ENST00000568949 JDP2Q8WYK2 163 aa16.73■□□□□ 0.27
SNX29-207ENST00000568949 PHACTR3Q96KR7 559 aa16.73■□□□□ 0.27
SNX29-207ENST00000568949 ABT1Q9ULW3 272 aaKnown RBP16.73■□□□□ 0.27
SNX29-207ENST00000568949 SNED1Q8TER0 1413 aa16.72■□□□□ 0.27
SNX29-207ENST00000568949 PRAMEF22A3QJZ6 481 aa16.72■□□□□ 0.27
SNX29-207ENST00000568949 CC2D2BQ6DHV5 1058 aa16.72■□□□□ 0.27
SNX29-207ENST00000568949 DDX21Q9NR30 783 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNX29-207ENST00000568949 NBPF26B4DH59 902 aa16.71■□□□□ 0.27
SNX29-207ENST00000568949 PRKAR2BP31323 418 aa16.71■□□□□ 0.27
SNX29-207ENST00000568949 EIF6P56537 245 aaKnown RBP16.71■□□□□ 0.27
SNX29-207ENST00000568949 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
SNX29-207ENST00000568949 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
SNX29-207ENST00000568949 GTF2E1P29083 439 aaPredicted RBP16.7■□□□□ 0.26
SNX29-207ENST00000568949 LMOD1P29536 600 aaPredicted RBP16.7■□□□□ 0.26
SNX29-207ENST00000568949 ECE1P42892 770 aa16.7■□□□□ 0.26
SNX29-207ENST00000568949 CRY2Q49AN0 593 aa16.7■□□□□ 0.26
SNX29-207ENST00000568949 GRIPAP1Q4V328 841 aa16.7■□□□□ 0.26
SNX29-207ENST00000568949 RSPH6AQ9H0K4 717 aa16.7■□□□□ 0.26
SNX29-207ENST00000568949 THSD7BQ9C0I4 1608 aa16.7■□□□□ 0.26
SNX29-207ENST00000568949 FAM177BA6PVY3 158 aa16.69■□□□□ 0.26
SNX29-207ENST00000568949 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
SNX29-207ENST00000568949 RTF1Q92541 710 aaKnown RBP16.69■□□□□ 0.26
SNX29-207ENST00000568949 HLFQ16534 295 aa16.68■□□□□ 0.26
SNX29-207ENST00000568949 CAPNS2Q96L46 248 aa16.68■□□□□ 0.26
SNX29-207ENST00000568949 BEGAINQ9BUH8 593 aa16.68■□□□□ 0.26
SNX29-207ENST00000568949 NYXQ9GZU5 481 aa16.68■□□□□ 0.26
SNX29-207ENST00000568949 LTBP1Q14766 1721 aa16.67■□□□□ 0.26
SNX29-207ENST00000568949 TRPM7Q96QT4 1865 aa16.67■□□□□ 0.26
SNX29-207ENST00000568949 CFAP53Q96M91 514 aa16.67■□□□□ 0.26
SNX29-207ENST00000568949 GJA3Q9Y6H8 435 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms