RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NEURL1BA8MQ27 555 aa8.75□□□□□ -1.01
SMG1-215ENST00000568239 STARD3NLO95772 234 aa8.75□□□□□ -1.01
SMG1-215ENST00000568239 MFAP1P55081 439 aaKnown RBP8.75□□□□□ -1.01
SMG1-215ENST00000568239 RTL5Q5HYW3 569 aaPredicted RBP8.75□□□□□ -1.01
SMG1-215ENST00000568239 IL1RAPL2Q9NP60 686 aa8.75□□□□□ -1.01
SMG1-215ENST00000568239 HDAC5Q9UQL6 1122 aa8.75□□□□□ -1.01
SMG1-215ENST00000568239 TNS2Q63HR2 1409 aa8.75□□□□□ -1.01
SMG1-215ENST00000568239 ITGB4P16144 1822 aa8.74□□□□□ -1.01
SMG1-215ENST00000568239 KCPQ6ZWJ8 1503 aa8.74□□□□□ -1.01
SMG1-215ENST00000568239 MARCH10Q8NA82 808 aaPredicted RBP8.74□□□□□ -1.01
SMG1-215ENST00000568239 PLBD2Q8NHP8 589 aa8.74□□□□□ -1.01
SMG1-215ENST00000568239 USP21Q9UK80 565 aa8.74□□□□□ -1.01
SMG1-215ENST00000568239 N4BP2Q86UW6 1770 aaPredicted RBP8.74□□□□□ -1.01
SMG1-215ENST00000568239 SLIT2O94813 1529 aa8.74□□□□□ -1.01
SMG1-215ENST00000568239 HSPA1LP34931 641 aa8.74□□□□□ -1.01
SMG1-215ENST00000568239 GCKRQ14397 625 aa8.74□□□□□ -1.01
SMG1-215ENST00000568239 BMP2KLQ5H9B9 411 aa8.74□□□□□ -1.01
SMG1-215ENST00000568239 SSH3Q8TE77 659 aa8.74□□□□□ -1.01
SMG1-215ENST00000568239 SUCLG2Q96I99 432 aa8.74□□□□□ -1.01
SMG1-215ENST00000568239 ERBB4Q15303 1308 aa8.73□□□□□ -1.01
SMG1-215ENST00000568239 TSHZ3Q63HK5 1081 aa8.73□□□□□ -1.01
SMG1-215ENST00000568239 UBE3BQ7Z3V4 1068 aa8.73□□□□□ -1.01
SMG1-215ENST00000568239 TEX13AQ9BXU3 409 aaPredicted RBP8.73□□□□□ -1.01
SMG1-215ENST00000568239 NRAPQ86VF7 1730 aa8.73□□□□□ -1.01
SMG1-215ENST00000568239 BCL9O00512 1426 aa8.73□□□□□ -1.01
SMG1-215ENST00000568239 A0A087WZG4 1122 aa8.73□□□□□ -1.01
SMG1-215ENST00000568239 BARGINQ6ZT62 677 aa8.73□□□□□ -1.01
SMG1-215ENST00000568239 BICC1Q9H694 974 aaKnown RBP8.73□□□□□ -1.01
SMG1-215ENST00000568239 UBR2Q8IWV8 1755 aa8.73□□□□□ -1.01
SMG1-215ENST00000568239 PA2G4Q9UQ80 394 aaKnown RBP8.73□□□□□ -1.01
SMG1-215ENST00000568239 LAMB4A4D0S4 1761 aa8.72□□□□□ -1.01
SMG1-215ENST00000568239 IBTKQ9P2D0 1353 aaPredicted RBP8.72□□□□□ -1.01
SMG1-215ENST00000568239 GSPT1P15170 499 aaKnown RBP8.72□□□□□ -1.01
SMG1-215ENST00000568239 VSIG10Q8N0Z9 540 aa8.72□□□□□ -1.01
SMG1-215ENST00000568239 SPATA31A6Q5VVP1 1343 aa8.72□□□□□ -1.01
SMG1-215ENST00000568239 NWD2Q9ULI1 1742 aa8.72□□□□□ -1.01
SMG1-215ENST00000568239 POLA2Q14181 598 aa8.72□□□□□ -1.01
SMG1-215ENST00000568239 VPS72Q15906 364 aa8.72□□□□□ -1.01
SMG1-215ENST00000568239 TTC22Q5TAA0 569 aa8.72□□□□□ -1.01
SMG1-215ENST00000568239 SIL1Q9H173 461 aa8.72□□□□□ -1.01
SMG1-215ENST00000568239 CHMP3Q9Y3E7 222 aa8.72□□□□□ -1.01
SMG1-215ENST00000568239 GLI3P10071 1580 aa8.72□□□□□ -1.01
SMG1-215ENST00000568239 BCL9LQ86UU0 1499 aa8.71□□□□□ -1.01
SMG1-215ENST00000568239 WNK3Q9BYP7 1800 aa8.71□□□□□ -1.01
SMG1-215ENST00000568239 KCNQ2O43526 872 aa8.71□□□□□ -1.01
SMG1-215ENST00000568239 KIF6Q6ZMV9 814 aa8.71□□□□□ -1.01
SMG1-215ENST00000568239 NUTM1Q86Y26 1132 aa8.71□□□□□ -1.01
SMG1-215ENST00000568239 RHPN1Q8TCX5 695 aa8.71□□□□□ -1.01
SMG1-215ENST00000568239 KAZALD1Q96I82 304 aa8.71□□□□□ -1.01
SMG1-215ENST00000568239 SLC4A9Q96Q91 983 aa8.71□□□□□ -1.01
SMG1-215ENST00000568239 PAPPAQ13219 1627 aa8.71□□□□□ -1.02
SMG1-215ENST00000568239 ATP6V1AP38606 617 aa8.71□□□□□ -1.02
SMG1-215ENST00000568239 PDE1AP54750 535 aa8.71□□□□□ -1.02
SMG1-215ENST00000568239 FAM182BQ5T319 152 aa8.71□□□□□ -1.02
SMG1-215ENST00000568239 FNBP4Q8N3X1 1017 aaPredicted RBP8.71□□□□□ -1.02
SMG1-215ENST00000568239 DDRGK1Q96HY6 314 aa8.71□□□□□ -1.02
SMG1-215ENST00000568239 NOP58Q9Y2X3 529 aaKnown RBP8.71□□□□□ -1.02
SMG1-215ENST00000568239 DOT1LQ8TEK3 1739 aa8.71□□□□□ -1.02
SMG1-215ENST00000568239 RAB11FIP3O75154 756 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 MX1P20591 662 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 SLC4A3P48751 1232 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 HSP90AB4PQ58FF6 505 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 KLHDC4Q8TBB5 520 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 KIF1BPQ96EK5 621 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 CWC25Q9NXE8 425 aaPredicted RBP8.7□□□□□ -1.02
SMG1-215ENST00000568239 ZBTB1Q9Y2K1 713 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 AFDNP55196 1824 aaKnown RBP8.7□□□□□ -1.02
SMG1-215ENST00000568239 TRIM6-TRIM34B2RNG4 842 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 CYP19A1P11511 503 aaPredicted RBP8.7□□□□□ -1.02
SMG1-215ENST00000568239 EPHA10Q5JZY3 1008 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 TBC1D9Q6ZT07 1266 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 UTYO14607 1347 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 ARFGEF2Q9Y6D5 1785 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 LRP6O75581 1613 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 CDC45O75419 566 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 G3BP1Q13283 466 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMG1-215ENST00000568239 MTX1Q13505 466 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 RILPL2Q969X0 211 aa8.7□□□□□ -1.02
SMG1-215ENST00000568239 SDSP20132 328 aa8.69□□□□□ -1.02
SMG1-215ENST00000568239 GPTP24298 496 aa8.69□□□□□ -1.02
SMG1-215ENST00000568239 C22orf23Q9BZE7 217 aa8.69□□□□□ -1.02
SMG1-215ENST00000568239 TBC1D2BQ9UPU7 963 aa8.69□□□□□ -1.02
SMG1-215ENST00000568239 LOC102724428A0A0B4J2F2 783 aa8.69□□□□□ -1.02
SMG1-215ENST00000568239 SIK1P57059 783 aa8.69□□□□□ -1.02
SMG1-215ENST00000568239 MAPK8IP2Q13387 824 aaPredicted RBP8.69□□□□□ -1.02
SMG1-215ENST00000568239 CLASRPQ8N2M8 674 aaKnown RBP8.69□□□□□ -1.02
SMG1-215ENST00000568239 AFF2P51816 1311 aa8.69□□□□□ -1.02
SMG1-215ENST00000568239 CASC1Q6TDU7 716 aa8.68□□□□□ -1.02
SMG1-215ENST00000568239 TBC1D32Q96NH3 1257 aa8.68□□□□□ -1.02
SMG1-215ENST00000568239 PALLDQ8WX93 1383 aa8.68□□□□□ -1.02
SMG1-215ENST00000568239 KCNQ4P56696 695 aa8.68□□□□□ -1.02
SMG1-215ENST00000568239 TCIRG1Q13488 830 aa8.68□□□□□ -1.02
SMG1-215ENST00000568239 LMBR1LQ6UX01 489 aa8.68□□□□□ -1.02
SMG1-215ENST00000568239 CCDC191Q8NCU4 936 aa8.68□□□□□ -1.02
SMG1-215ENST00000568239 MAP4K4O95819 1239 aaPredicted RBP8.67□□□□□ -1.02
SMG1-215ENST00000568239 IFIT2P09913 472 aaKnown RBP8.67□□□□□ -1.02
SMG1-215ENST00000568239 HLFQ16534 295 aa8.67□□□□□ -1.02
SMG1-215ENST00000568239 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
SMG1-215ENST00000568239 ERC1Q8IUD2 1116 aa8.67□□□□□ -1.02
SMG1-215ENST00000568239 AACSQ86V21 672 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms