RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
COMMD4-214ENST00000566230 TAOK3Q9H2K8 898 aa18.03■□□□□ 0.48
COMMD4-214ENST00000566230 CEMIPQ8WUJ3 1361 aa18.03■□□□□ 0.48
COMMD4-214ENST00000566230 PRPF40BQ6NWY9 871 aaKnown RBP18.02■□□□□ 0.48
COMMD4-214ENST00000566230 CNKSR1Q969H4 720 aa18.02■□□□□ 0.48
COMMD4-214ENST00000566230 C7orf43Q8WVR3 580 aa18.01■□□□□ 0.47
COMMD4-214ENST00000566230 PHACTR3Q96KR7 559 aa18.01■□□□□ 0.47
COMMD4-214ENST00000566230 USP16Q9Y5T5 823 aa18.01■□□□□ 0.47
COMMD4-214ENST00000566230 PIP4K2AP48426 406 aaPredicted RBP18■□□□□ 0.47
COMMD4-214ENST00000566230 DZIP3Q86Y13 1208 aaKnown RBP18■□□□□ 0.47
COMMD4-214ENST00000566230 MASTLQ96GX5 879 aa18■□□□□ 0.47
COMMD4-214ENST00000566230 CREBZFQ9NS37 354 aa18■□□□□ 0.47
COMMD4-214ENST00000566230 MKRN1Q9UHC7 482 aaKnown RBP18■□□□□ 0.47
COMMD4-214ENST00000566230 PRAMEF22A3QJZ6 481 aa17.99■□□□□ 0.47
COMMD4-214ENST00000566230 ST5P78524 1137 aa17.99■□□□□ 0.47
COMMD4-214ENST00000566230 SCN4AP35499 1836 aa17.99■□□□□ 0.47
COMMD4-214ENST00000566230 NPC1L1Q9UHC9 1359 aa17.99■□□□□ 0.47
COMMD4-214ENST00000566230 BTBD11A6QL63 1104 aa17.98■□□□□ 0.47
COMMD4-214ENST00000566230 NPHP1O15259 732 aa17.98■□□□□ 0.47
COMMD4-214ENST00000566230 CNGB1Q14028 1251 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-214ENST00000566230 NPM2Q86SE8 214 aaKnown RBP17.98■□□□□ 0.47
COMMD4-214ENST00000566230 SOGA3Q5TF21 947 aa17.97■□□□□ 0.47
COMMD4-214ENST00000566230 PASKQ96RG2 1323 aa17.97■□□□□ 0.47
COMMD4-214ENST00000566230 PRKAR2BP31323 418 aa17.96■□□□□ 0.47
COMMD4-214ENST00000566230 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
COMMD4-214ENST00000566230 L3MBTL3Q96JM7 780 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-214ENST00000566230 RSPH6AQ9H0K4 717 aa17.96■□□□□ 0.47
COMMD4-214ENST00000566230 KLRG2A4D1S0 409 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-214ENST00000566230 NBPF5PQ86XG9 351 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-214ENST00000566230 TAF1DQ9H5J8 278 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-214ENST00000566230 CNTNAP1P78357 1384 aa17.94■□□□□ 0.46
COMMD4-214ENST00000566230 NBPF26B4DH59 902 aa17.94■□□□□ 0.46
COMMD4-214ENST00000566230 NPR1P16066 1061 aa17.94■□□□□ 0.46
COMMD4-214ENST00000566230 CCDC93Q567U6 631 aa17.94■□□□□ 0.46
COMMD4-214ENST00000566230 NBPF10Q6P3W6 841 aaKnown RBP17.94■□□□□ 0.46
COMMD4-214ENST00000566230 OLFM4Q6UX06 510 aa17.94■□□□□ 0.46
COMMD4-214ENST00000566230 LDHDQ86WU2 507 aa17.94■□□□□ 0.46
COMMD4-214ENST00000566230 NBPF15Q8N660 670 aa17.94■□□□□ 0.46
COMMD4-214ENST00000566230 IQCA1LA6NCM1 817 aa17.93■□□□□ 0.46
COMMD4-214ENST00000566230 FOXN1O15353 648 aa17.93■□□□□ 0.46
COMMD4-214ENST00000566230 ITGBL1O95965 494 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-214ENST00000566230 ZNF277Q9NRM2 450 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-214ENST00000566230 ZNF541Q9H0D2 1346 aa17.93■□□□□ 0.46
COMMD4-214ENST00000566230 ADAMTSL1Q8N6G6 1762 aa17.92■□□□□ 0.46
COMMD4-214ENST00000566230 SNRPA1P09661 255 aaKnown RBP17.92■□□□□ 0.46
COMMD4-214ENST00000566230 FKBP4Q02790 459 aaKnown RBP eCLIP17.92■□□□□ 0.46
COMMD4-214ENST00000566230 MCM10Q7L590 875 aa17.91■□□□□ 0.46
COMMD4-214ENST00000566230 NIP7Q9Y221 180 aaKnown RBP eCLIP17.91■□□□□ 0.46
COMMD4-214ENST00000566230 ZNF652Q9Y2D9 606 aa17.91■□□□□ 0.46
COMMD4-214ENST00000566230 ZEB1P37275 1124 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-214ENST00000566230 VEGFBP49765 207 aa17.9■□□□□ 0.46
COMMD4-214ENST00000566230 TPTE2Q6XPS3 522 aa17.9■□□□□ 0.46
COMMD4-214ENST00000566230 TMEM88BA6NKF7 163 aa17.89■□□□□ 0.45
COMMD4-214ENST00000566230 FAM177BA6PVY3 158 aa17.89■□□□□ 0.45
COMMD4-214ENST00000566230 RGL2O15211 777 aa17.89■□□□□ 0.45
COMMD4-214ENST00000566230 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
COMMD4-214ENST00000566230 HLFQ16534 295 aa17.89■□□□□ 0.45
COMMD4-214ENST00000566230 EAPPQ56P03 285 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-214ENST00000566230 HACL1Q9UJ83 578 aa17.89■□□□□ 0.45
COMMD4-214ENST00000566230 RTKN2Q8IZC4 609 aa17.88■□□□□ 0.45
COMMD4-214ENST00000566230 CFAP53Q96M91 514 aa17.88■□□□□ 0.45
COMMD4-214ENST00000566230 PRDM10Q9NQV6 1147 aa17.88■□□□□ 0.45
COMMD4-214ENST00000566230 NUP98P52948 1817 aa17.87■□□□□ 0.45
COMMD4-214ENST00000566230 FZD9O00144 591 aa17.87■□□□□ 0.45
COMMD4-214ENST00000566230 EPHX2P34913 555 aa17.87■□□□□ 0.45
COMMD4-214ENST00000566230 SYNE4Q8N205 404 aa17.87■□□□□ 0.45
COMMD4-214ENST00000566230 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
COMMD4-214ENST00000566230 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
COMMD4-214ENST00000566230 SNED1Q8TER0 1413 aa17.87■□□□□ 0.45
COMMD4-214ENST00000566230 U2AF1L5P0DN76 240 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-214ENST00000566230 IARSP41252 1262 aaKnown RBP17.86■□□□□ 0.45
COMMD4-214ENST00000566230 U2AF1Q01081 240 aaKnown RBP eCLIP17.86■□□□□ 0.45
COMMD4-214ENST00000566230 NUDCQ9Y266 331 aa17.86■□□□□ 0.45
COMMD4-214ENST00000566230 RNF123Q5XPI4 1314 aa17.86■□□□□ 0.45
COMMD4-214ENST00000566230 LAMB4A4D0S4 1761 aa17.85■□□□□ 0.45
COMMD4-214ENST00000566230 COL4A5P29400 1685 aa17.85■□□□□ 0.45
COMMD4-214ENST00000566230 ALDH1B1P30837 517 aa17.85■□□□□ 0.45
COMMD4-214ENST00000566230 CTCFP49711 727 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-214ENST00000566230 WBP1LQ9NX94 342 aa17.85■□□□□ 0.45
COMMD4-214ENST00000566230 MIS18AQ9NYP9 233 aa17.85■□□□□ 0.45
COMMD4-214ENST00000566230 HTATSF1O43719 755 aaKnown RBP17.84■□□□□ 0.45
COMMD4-214ENST00000566230 TAF7Q15545 349 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-214ENST00000566230 MAP1SQ66K74 1059 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-214ENST00000566230 PNMA8AQ86V59 439 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-214ENST00000566230 CNTROBQ8N137 903 aa17.84■□□□□ 0.45
COMMD4-214ENST00000566230 DLG5Q8TDM6 1919 aa17.84■□□□□ 0.45
COMMD4-214ENST00000566230 ABCC12Q96J65 1359 aa17.83■□□□□ 0.45
COMMD4-214ENST00000566230 RASSF10A6NK89 507 aa17.83■□□□□ 0.44
COMMD4-214ENST00000566230 PPP2R1AP30153 589 aa17.83■□□□□ 0.44
COMMD4-214ENST00000566230 CRY2Q49AN0 593 aa17.83■□□□□ 0.44
COMMD4-214ENST00000566230 GPC2Q8N158 579 aa17.83■□□□□ 0.44
COMMD4-214ENST00000566230 AIDAQ96BJ3 306 aa17.83■□□□□ 0.44
COMMD4-214ENST00000566230 PSMD1Q99460 953 aa17.83■□□□□ 0.44
COMMD4-214ENST00000566230 LTBP1Q14766 1721 aa17.83■□□□□ 0.44
COMMD4-214ENST00000566230 GTF2E1P29083 439 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-214ENST00000566230 LBX1P52954 281 aa17.82■□□□□ 0.44
COMMD4-214ENST00000566230 DEFB115Q30KQ5 88 aa17.82■□□□□ 0.44
COMMD4-214ENST00000566230 NUTM1Q86Y26 1132 aa17.82■□□□□ 0.44
COMMD4-214ENST00000566230 KDM3BQ7LBC6 1761 aa17.81■□□□□ 0.44
COMMD4-214ENST00000566230 SLC51AQ86UW1 340 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms