RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 NBPF10Q6P3W6 841 aaKnown RBP25.09■■□□□ 1.61
ABCA3-204ENST00000566200 NBPF15Q8N660 670 aa25.09■■□□□ 1.61
ABCA3-204ENST00000566200 CNBD1Q8NA66 436 aa25.09■■□□□ 1.61
ABCA3-204ENST00000566200 PDZRN3Q9UPQ7 1066 aa25.09■■□□□ 1.61
ABCA3-204ENST00000566200 GLTPD2A6NH11 291 aa25.08■■□□□ 1.61
ABCA3-204ENST00000566200 HTRA3P83110 453 aa25.08■■□□□ 1.61
ABCA3-204ENST00000566200 NPM2Q86SE8 214 aaKnown RBP25.08■■□□□ 1.61
ABCA3-204ENST00000566200 ZNF219Q9P2Y4 722 aaPredicted RBP25.08■■□□□ 1.61
ABCA3-204ENST00000566200 IFFO2Q5TF58 517 aa25.07■■□□□ 1.6
ABCA3-204ENST00000566200 SRGNP10124 158 aa25.06■■□□□ 1.6
ABCA3-204ENST00000566200 MIS18AQ9NYP9 233 aa25.06■■□□□ 1.6
ABCA3-204ENST00000566200 TAF7Q15545 349 aaPredicted RBP25.05■■□□□ 1.6
ABCA3-204ENST00000566200 CLEC4GQ6UXB4 293 aa25.05■■□□□ 1.6
ABCA3-204ENST00000566200 ST5P78524 1137 aa25.04■■□□□ 1.6
ABCA3-204ENST00000566200 STYK1Q6J9G0 422 aa25.04■■□□□ 1.6
ABCA3-204ENST00000566200 PLEKHF1Q96S99 279 aa25.04■■□□□ 1.6
ABCA3-204ENST00000566200 POTECB2RU33 542 aa25.02■■□□□ 1.6
ABCA3-204ENST00000566200 NPHP1O15259 732 aa25.02■■□□□ 1.6
ABCA3-204ENST00000566200 VEGFAP15692 232 aaPredicted RBP25.02■■□□□ 1.6
ABCA3-204ENST00000566200 PRPF40BQ6NWY9 871 aaKnown RBP25.02■■□□□ 1.6
ABCA3-204ENST00000566200 LTBP3Q9NS15 1303 aa25.02■■□□□ 1.6
ABCA3-204ENST00000566200 NBPF5PQ86XG9 351 aaPredicted RBP25.01■■□□□ 1.59
ABCA3-204ENST00000566200 SMC1BQ8NDV3 1235 aa25.01■■□□□ 1.59
ABCA3-204ENST00000566200 CNKSR1Q969H4 720 aa25.01■■□□□ 1.59
ABCA3-204ENST00000566200 MASTLQ96GX5 879 aa25.01■■□□□ 1.59
ABCA3-204ENST00000566200 ZNF652Q9Y2D9 606 aa25■■□□□ 1.59
ABCA3-204ENST00000566200 RGL2O15211 777 aa24.99■■□□□ 1.59
ABCA3-204ENST00000566200 HLFQ16534 295 aa24.99■■□□□ 1.59
ABCA3-204ENST00000566200 C7orf43Q8WVR3 580 aa24.99■■□□□ 1.59
ABCA3-204ENST00000566200 KLRG2A4D1S0 409 aaPredicted RBP24.98■■□□□ 1.59
ABCA3-204ENST00000566200 ERFEQ4G0M1 354 aa24.98■■□□□ 1.59
ABCA3-204ENST00000566200 THUMPD2Q9BTF0 503 aaKnown RBP24.98■■□□□ 1.59
ABCA3-204ENST00000566200 TAOK3Q9H2K8 898 aa24.98■■□□□ 1.59
ABCA3-204ENST00000566200 NIP7Q9Y221 180 aaKnown RBP eCLIP24.98■■□□□ 1.59
ABCA3-204ENST00000566200 KLRG1Q96E93 195 aa24.97■■□□□ 1.59
ABCA3-204ENST00000566200 NUP98P52948 1817 aa24.97■■□□□ 1.59
ABCA3-204ENST00000566200 NFE2L2Q16236 605 aa24.96■■□□□ 1.59
ABCA3-204ENST00000566200 EIF4A1P60842 406 aaKnown RBP24.95■■□□□ 1.58
ABCA3-204ENST00000566200 FAM177BA6PVY3 158 aa24.94■■□□□ 1.58
ABCA3-204ENST00000566200 DPY19L2Q6NUT2 758 aa24.94■■□□□ 1.58
ABCA3-204ENST00000566200 TPTE2Q6XPS3 522 aa24.94■■□□□ 1.58
ABCA3-204ENST00000566200 JMYQ8N9B5 988 aa24.94■■□□□ 1.58
ABCA3-204ENST00000566200 PNISRQ8TF01 805 aaKnown RBP24.94■■□□□ 1.58
ABCA3-204ENST00000566200 NEFMP07197 916 aa24.93■■□□□ 1.58
ABCA3-204ENST00000566200 NPR1P16066 1061 aa24.93■■□□□ 1.58
ABCA3-204ENST00000566200 SOGA3Q5TF21 947 aa24.93■■□□□ 1.58
ABCA3-204ENST00000566200 OLFM4Q6UX06 510 aa24.92■■□□□ 1.58
ABCA3-204ENST00000566200 DDNO94850 711 aaPredicted RBP24.91■■□□□ 1.58
ABCA3-204ENST00000566200 TTLL7Q6ZT98 887 aa24.91■■□□□ 1.58
ABCA3-204ENST00000566200 NGEFQ8N5V2 710 aa24.91■■□□□ 1.58
ABCA3-204ENST00000566200 ABCC12Q96J65 1359 aa24.91■■□□□ 1.58
ABCA3-204ENST00000566200 CCDC93Q567U6 631 aa24.9■■□□□ 1.58
ABCA3-204ENST00000566200 MAP3K15Q6ZN16 1313 aa24.89■■□□□ 1.58
ABCA3-204ENST00000566200 ERVV-1B6SEH8 477 aa24.89■■□□□ 1.58
ABCA3-204ENST00000566200 RRP7AQ9Y3A4 280 aaKnown RBP24.89■■□□□ 1.58
ABCA3-204ENST00000566200 SNED1Q8TER0 1413 aa24.88■■□□□ 1.57
ABCA3-204ENST00000566200 MAPK8IP3Q9UPT6 1336 aa24.87■■□□□ 1.57
ABCA3-204ENST00000566200 POTEIP0CG38 1075 aa24.87■■□□□ 1.57
ABCA3-204ENST00000566200 POTEJP0CG39 1038 aa24.87■■□□□ 1.57
ABCA3-204ENST00000566200 MYL6BP14649 208 aa24.87■■□□□ 1.57
ABCA3-204ENST00000566200 NUTM1Q86Y26 1132 aa24.87■■□□□ 1.57
ABCA3-204ENST00000566200 UBN2Q6ZU65 1347 aa24.86■■□□□ 1.57
ABCA3-204ENST00000566200 FKBP4Q02790 459 aaKnown RBP eCLIP24.86■■□□□ 1.57
ABCA3-204ENST00000566200 CRY2Q49AN0 593 aa24.86■■□□□ 1.57
ABCA3-204ENST00000566200 ZBTB3Q9H5J0 574 aa24.85■■□□□ 1.57
ABCA3-204ENST00000566200 ZNF277Q9NRM2 450 aaPredicted RBP24.85■■□□□ 1.57
ABCA3-204ENST00000566200 SCN4AP35499 1836 aa24.84■■□□□ 1.57
ABCA3-204ENST00000566200 GTF2E1P29083 439 aaPredicted RBP24.84■■□□□ 1.57
ABCA3-204ENST00000566200 LRP10Q7Z4F1 713 aa24.84■■□□□ 1.57
ABCA3-204ENST00000566200 PNNQ9H307 717 aaKnown RBP24.84■■□□□ 1.57
ABCA3-204ENST00000566200 ZNF541Q9H0D2 1346 aa24.84■■□□□ 1.57
ABCA3-204ENST00000566200 PCNTO95613 3336 aa24.83■■□□□ 1.57
ABCA3-204ENST00000566200 GPTP24298 496 aa24.83■■□□□ 1.57
ABCA3-204ENST00000566200 KIF6Q6ZMV9 814 aa24.83■■□□□ 1.57
ABCA3-204ENST00000566200 NYXQ9GZU5 481 aa24.83■■□□□ 1.57
ABCA3-204ENST00000566200 RIC1Q4ADV7 1423 aa24.83■■□□□ 1.57
ABCA3-204ENST00000566200 IBTKQ9P2D0 1353 aaPredicted RBP24.82■■□□□ 1.56
ABCA3-204ENST00000566200 ALDH1B1P30837 517 aa24.82■■□□□ 1.56
ABCA3-204ENST00000566200 PDIA6Q15084 440 aa24.82■■□□□ 1.56
ABCA3-204ENST00000566200 SUSD4Q5VX71 490 aa24.82■■□□□ 1.56
ABCA3-204ENST00000566200 RTKN2Q8IZC4 609 aa24.82■■□□□ 1.56
ABCA3-204ENST00000566200 L3MBTL3Q96JM7 780 aaPredicted RBP24.82■■□□□ 1.56
ABCA3-204ENST00000566200 ERBB4Q15303 1308 aa24.82■■□□□ 1.56
ABCA3-204ENST00000566200 CHADLQ6NUI6 762 aa24.81■■□□□ 1.56
ABCA3-204ENST00000566200 ZNF34Q8IZ26 560 aa24.81■■□□□ 1.56
ABCA3-204ENST00000566200 TSPYL4Q9UJ04 414 aa24.81■■□□□ 1.56
ABCA3-204ENST00000566200 COL4A5P29400 1685 aa24.81■■□□□ 1.56
ABCA3-204ENST00000566200 RIPK4P57078 832 aa24.8■■□□□ 1.56
ABCA3-204ENST00000566200 RALBP1Q15311 655 aa24.8■■□□□ 1.56
ABCA3-204ENST00000566200 SLC51AQ86UW1 340 aa24.8■■□□□ 1.56
ABCA3-204ENST00000566200 NTSR2O95665 410 aa24.79■■□□□ 1.56
ABCA3-204ENST00000566200 HOXA10P31260 410 aaPredicted RBP24.79■■□□□ 1.56
ABCA3-204ENST00000566200 GIGYF2Q6Y7W6 1299 aaKnown RBP24.79■■□□□ 1.56
ABCA3-204ENST00000566200 SYNE4Q8N205 404 aa24.79■■□□□ 1.56
ABCA3-204ENST00000566200 TAF1DQ9H5J8 278 aaPredicted RBP24.79■■□□□ 1.56
ABCA3-204ENST00000566200 ADAMTSL1Q8N6G6 1762 aa24.79■■□□□ 1.56
ABCA3-204ENST00000566200 IARSP41252 1262 aaKnown RBP24.78■■□□□ 1.56
ABCA3-204ENST00000566200 TMPOP42166 694 aaKnown RBP24.78■■□□□ 1.56
ABCA3-204ENST00000566200 PROSER3Q2NL68 480 aa24.78■■□□□ 1.56
ABCA3-204ENST00000566200 C3orf67Q6ZVT6 689 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms