RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 ARXQ96QS3 562 aa12.34□□□□□ -0.43
SF3B3-207ENST00000566095 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
SF3B3-207ENST00000566095 KDM2BQ8NHM5 1336 aa12.34□□□□□ -0.43
SF3B3-207ENST00000566095 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
SF3B3-207ENST00000566095 PROSER3Q2NL68 480 aa12.33□□□□□ -0.44
SF3B3-207ENST00000566095 C20orf194Q5TEA3 1177 aa12.33□□□□□ -0.44
SF3B3-207ENST00000566095 NBPF14Q5TI25 921 aa12.33□□□□□ -0.44
SF3B3-207ENST00000566095 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
SF3B3-207ENST00000566095 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
SF3B3-207ENST00000566095 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
SF3B3-207ENST00000566095 FLAD1Q8NFF5 587 aa12.33□□□□□ -0.44
SF3B3-207ENST00000566095 SLC4A9Q96Q91 983 aa12.33□□□□□ -0.44
SF3B3-207ENST00000566095 METTL22Q9BUU2 404 aaPredicted RBP12.33□□□□□ -0.44
SF3B3-207ENST00000566095 MAP3K15Q6ZN16 1313 aa12.33□□□□□ -0.44
SF3B3-207ENST00000566095 RREB1Q92766 1687 aa12.32□□□□□ -0.44
SF3B3-207ENST00000566095 COL15A1P39059 1388 aa12.32□□□□□ -0.44
SF3B3-207ENST00000566095 COL5A3P25940 1745 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-207ENST00000566095 RPS6KA4O75676 772 aa12.32□□□□□ -0.44
SF3B3-207ENST00000566095 ANXA1P04083 346 aa12.32□□□□□ -0.44
SF3B3-207ENST00000566095 RLBP1P12271 317 aa12.32□□□□□ -0.44
SF3B3-207ENST00000566095 EIF5P55010 431 aaKnown RBP12.32□□□□□ -0.44
SF3B3-207ENST00000566095 ITPK1Q13572 414 aa12.32□□□□□ -0.44
SF3B3-207ENST00000566095 TXNRD1Q16881 649 aa12.32□□□□□ -0.44
SF3B3-207ENST00000566095 C9orf78Q9NZ63 289 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-207ENST00000566095 ZBTB1Q9Y2K1 713 aa12.32□□□□□ -0.44
SF3B3-207ENST00000566095 N4BP2Q86UW6 1770 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-207ENST00000566095 ADCY9O60503 1353 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 F6X3S4 739 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 GNPATO15228 680 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 ZPR1O75312 459 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 HMMRO75330 724 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 UBTFL1P0CB47 393 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-207ENST00000566095 HDAC1Q13547 482 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-207ENST00000566095 BEND3Q5T5X7 828 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 INTS5Q6P9B9 1019 aaKnown RBP12.31□□□□□ -0.44
SF3B3-207ENST00000566095 CLEC4GQ6UXB4 293 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 LRP10Q7Z4F1 713 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 LINC00116Q8NCU8 138 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 RWDD1Q9H446 243 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-207ENST00000566095 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
SF3B3-207ENST00000566095 GNAI2P04899 355 aa12.3□□□□□ -0.44
SF3B3-207ENST00000566095 GIGYF2Q6Y7W6 1299 aaKnown RBP12.3□□□□□ -0.44
SF3B3-207ENST00000566095 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
SF3B3-207ENST00000566095 MYD88Q99836 296 aa12.3□□□□□ -0.44
SF3B3-207ENST00000566095 ZBTB7BO15156 539 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-207ENST00000566095 SSFA2P28290 1259 aa12.29□□□□□ -0.44
SF3B3-207ENST00000566095 RFC4P35249 363 aa12.29□□□□□ -0.44
SF3B3-207ENST00000566095 TRIM28Q13263 835 aaKnown RBP12.29□□□□□ -0.44
SF3B3-207ENST00000566095 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
SF3B3-207ENST00000566095 PARP10Q53GL7 1025 aa12.29□□□□□ -0.44
SF3B3-207ENST00000566095 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
SF3B3-207ENST00000566095 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-207ENST00000566095 ZBTB3Q9H5J0 574 aa12.29□□□□□ -0.44
SF3B3-207ENST00000566095 CWC25Q9NXE8 425 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-207ENST00000566095 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
SF3B3-207ENST00000566095 TNS1Q9HBL0 1735 aaKnown RBP12.28□□□□□ -0.44
SF3B3-207ENST00000566095 NEURL1BA8MQ27 555 aa12.28□□□□□ -0.44
SF3B3-207ENST00000566095 PIP4K2AP48426 406 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-207ENST00000566095 PTF1AQ7RTS3 328 aa12.28□□□□□ -0.44
SF3B3-207ENST00000566095 ARFGEF2Q9Y6D5 1785 aa12.28□□□□□ -0.44
SF3B3-207ENST00000566095 TAF1LQ8IZX4 1826 aa12.27□□□□□ -0.44
SF3B3-207ENST00000566095 GRM8O00222 908 aa12.27□□□□□ -0.45
SF3B3-207ENST00000566095 TTLL7Q6ZT98 887 aa12.27□□□□□ -0.45
SF3B3-207ENST00000566095 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.45
SF3B3-207ENST00000566095 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-207ENST00000566095 NARFQ9UHQ1 456 aa12.27□□□□□ -0.45
SF3B3-207ENST00000566095 TNNQ9UQP3 1299 aa12.27□□□□□ -0.45
SF3B3-207ENST00000566095 GCKRQ14397 625 aa12.26□□□□□ -0.45
SF3B3-207ENST00000566095 NYXQ9GZU5 481 aa12.26□□□□□ -0.45
SF3B3-207ENST00000566095 STK32BQ9NY57 414 aa12.26□□□□□ -0.45
SF3B3-207ENST00000566095 TFCP2L1Q9NZI6 479 aa12.26□□□□□ -0.45
SF3B3-207ENST00000566095 TBC1D2BQ9UPU7 963 aa12.26□□□□□ -0.45
SF3B3-207ENST00000566095 NUP188Q5SRE5 1749 aa12.25□□□□□ -0.45
SF3B3-207ENST00000566095 ISCA1Q9BUE6 129 aa12.25□□□□□ -0.45
SF3B3-207ENST00000566095 UTYO14607 1347 aa12.25□□□□□ -0.45
SF3B3-207ENST00000566095 CAMTA2O94983 1202 aa12.24□□□□□ -0.45
SF3B3-207ENST00000566095 PCCAP05165 728 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-207ENST00000566095 HSP90AB4PQ58FF6 505 aa12.24□□□□□ -0.45
SF3B3-207ENST00000566095 SMC5Q8IY18 1101 aa12.24□□□□□ -0.45
SF3B3-207ENST00000566095 GCC1Q96CN9 775 aa12.24□□□□□ -0.45
SF3B3-207ENST00000566095 MEIS3Q99687 375 aa12.24□□□□□ -0.45
SF3B3-207ENST00000566095 USP44Q9H0E7 712 aa12.24□□□□□ -0.45
SF3B3-207ENST00000566095 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
SF3B3-207ENST00000566095 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
SF3B3-207ENST00000566095 USP42Q9H9J4 1324 aaKnown RBP12.23□□□□□ -0.45
SF3B3-207ENST00000566095 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
SF3B3-207ENST00000566095 ATP5J2-PTCD1G3V325 749 aa12.23□□□□□ -0.45
SF3B3-207ENST00000566095 PHF14O94880 888 aa12.23□□□□□ -0.45
SF3B3-207ENST00000566095 IGKV5-2P06315 115 aa12.23□□□□□ -0.45
SF3B3-207ENST00000566095 CWF19L2Q2TBE0 894 aaKnown RBP12.23□□□□□ -0.45
SF3B3-207ENST00000566095 ZBTB38Q8NAP3 1195 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-207ENST00000566095 CAMKK2Q96RR4 588 aa12.23□□□□□ -0.45
SF3B3-207ENST00000566095 SETDB2Q96T68 719 aa12.23□□□□□ -0.45
SF3B3-207ENST00000566095 NIP7Q9Y221 180 aaKnown RBP eCLIP12.23□□□□□ -0.45
SF3B3-207ENST00000566095 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
SF3B3-207ENST00000566095 ANKRD36CQ5JPF3 1778 aa12.23□□□□□ -0.45
SF3B3-207ENST00000566095 BCORQ6W2J9 1755 aa12.23□□□□□ -0.45
SF3B3-207ENST00000566095 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
SF3B3-207ENST00000566095 CDHR2Q9BYE9 1310 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms