RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 USP42Q9H9J4 1324 aaKnown RBP16.14■□□□□ 0.17
SF3B3-206ENST00000565990 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
SF3B3-206ENST00000565990 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
SF3B3-206ENST00000565990 PHF14O94880 888 aa16.13■□□□□ 0.17
SF3B3-206ENST00000565990 CAMTA2O94983 1202 aa16.13■□□□□ 0.17
SF3B3-206ENST00000565990 MAP3K15Q6ZN16 1313 aa16.13■□□□□ 0.17
SF3B3-206ENST00000565990 ZPR1O75312 459 aa16.12■□□□□ 0.17
SF3B3-206ENST00000565990 BCAR3O75815 825 aa16.12■□□□□ 0.17
SF3B3-206ENST00000565990 FLIIQ13045 1269 aa16.12■□□□□ 0.17
SF3B3-206ENST00000565990 USPL1Q5W0Q7 1092 aa16.12■□□□□ 0.17
SF3B3-206ENST00000565990 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
SF3B3-206ENST00000565990 PLBD2Q8NHP8 589 aa16.12■□□□□ 0.17
SF3B3-206ENST00000565990 ARHGAP45Q92619 1136 aa16.12■□□□□ 0.17
SF3B3-206ENST00000565990 TSHZ2Q9NRE2 1034 aa16.12■□□□□ 0.17
SF3B3-206ENST00000565990 BCORQ6W2J9 1755 aa16.12■□□□□ 0.17
SF3B3-206ENST00000565990 GYS1P13807 737 aa16.11■□□□□ 0.17
SF3B3-206ENST00000565990 AIMP1Q12904 312 aaKnown RBP16.11■□□□□ 0.17
SF3B3-206ENST00000565990 SRP68Q9UHB9 627 aaKnown RBP16.11■□□□□ 0.17
SF3B3-206ENST00000565990 RCAN3Q9UKA8 241 aa16.11■□□□□ 0.17
SF3B3-206ENST00000565990 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
SF3B3-206ENST00000565990 TM4SF1P30408 202 aa16.1■□□□□ 0.17
SF3B3-206ENST00000565990 HLFQ16534 295 aa16.1■□□□□ 0.17
SF3B3-206ENST00000565990 GIGYF2Q6Y7W6 1299 aaKnown RBP16.1■□□□□ 0.17
SF3B3-206ENST00000565990 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
SF3B3-206ENST00000565990 NLGN1Q8N2Q7 840 aa16.1■□□□□ 0.17
SF3B3-206ENST00000565990 SMC4Q9NTJ3 1288 aa16.1■□□□□ 0.17
SF3B3-206ENST00000565990 NOB1Q9ULX3 412 aaKnown RBP16.1■□□□□ 0.17
SF3B3-206ENST00000565990 PTPRCP08575 1304 aa16.1■□□□□ 0.17
SF3B3-206ENST00000565990 PI4KAP2A4QPH2 592 aa16.09■□□□□ 0.17
SF3B3-206ENST00000565990 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
SF3B3-206ENST00000565990 DDX58O95786 925 aaKnown RBP16.09■□□□□ 0.17
SF3B3-206ENST00000565990 PI4KAP1Q8N8J0 262 aa16.09■□□□□ 0.17
SF3B3-206ENST00000565990 BCL2L13Q9BXK5 485 aa16.09■□□□□ 0.17
SF3B3-206ENST00000565990 SCN7AQ01118 1682 aa16.08■□□□□ 0.17
SF3B3-206ENST00000565990 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.17
SF3B3-206ENST00000565990 MSH5O43196 834 aa16.08■□□□□ 0.16
SF3B3-206ENST00000565990 TRIM28Q13263 835 aaKnown RBP16.08■□□□□ 0.16
SF3B3-206ENST00000565990 TCIRG1Q13488 830 aa16.08■□□□□ 0.16
SF3B3-206ENST00000565990 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.16
SF3B3-206ENST00000565990 ARXQ96QS3 562 aa16.08■□□□□ 0.16
SF3B3-206ENST00000565990 ZBTB3Q9H5J0 574 aa16.08■□□□□ 0.16
SF3B3-206ENST00000565990 ADCY9O60503 1353 aa16.08■□□□□ 0.16
SF3B3-206ENST00000565990 IPO8O15397 1037 aaKnown RBP16.07■□□□□ 0.16
SF3B3-206ENST00000565990 FKBP5Q13451 457 aaPredicted RBP16.07■□□□□ 0.16
SF3B3-206ENST00000565990 RIC3Q7Z5B4 369 aa16.07■□□□□ 0.16
SF3B3-206ENST00000565990 METTL22Q9BUU2 404 aaPredicted RBP16.07■□□□□ 0.16
SF3B3-206ENST00000565990 MTFR1LQ9H019 292 aa16.07■□□□□ 0.16
SF3B3-206ENST00000565990 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
SF3B3-206ENST00000565990 HSP90AB3PQ58FF7 597 aa16.06■□□□□ 0.16
SF3B3-206ENST00000565990 ISCA1Q9BUE6 129 aa16.06■□□□□ 0.16
SF3B3-206ENST00000565990 MAP3K2Q9Y2U5 619 aa16.06■□□□□ 0.16
SF3B3-206ENST00000565990 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
SF3B3-206ENST00000565990 ATP10DQ9P241 1426 aa16.05■□□□□ 0.16
SF3B3-206ENST00000565990 KIF16BQ96L93 1317 aa16.05■□□□□ 0.16
SF3B3-206ENST00000565990 TBC1D9BQ66K14 1250 aa16.05■□□□□ 0.16
SF3B3-206ENST00000565990 DNAAF4Q8WXU2 420 aa16.05■□□□□ 0.16
SF3B3-206ENST00000565990 NFIXQ14938 502 aa16.04■□□□□ 0.16
SF3B3-206ENST00000565990 ZKSCAN2Q63HK3 967 aa16.04■□□□□ 0.16
SF3B3-206ENST00000565990 ATF7IPQ6VMQ6 1270 aa16.04■□□□□ 0.16
SF3B3-206ENST00000565990 SGIP1Q9BQI5 828 aa16.04■□□□□ 0.16
SF3B3-206ENST00000565990 API5Q9BZZ5 524 aaKnown RBP16.04■□□□□ 0.16
SF3B3-206ENST00000565990 IBTKQ9P2D0 1353 aaPredicted RBP16.03■□□□□ 0.16
SF3B3-206ENST00000565990 BEND3Q5T5X7 828 aa16.03■□□□□ 0.16
SF3B3-206ENST00000565990 SETDB2Q96T68 719 aa16.03■□□□□ 0.16
SF3B3-206ENST00000565990 RNF123Q5XPI4 1314 aa16.02■□□□□ 0.16
SF3B3-206ENST00000565990 F6X3S4 739 aa16.02■□□□□ 0.16
SF3B3-206ENST00000565990 ZBTB7AO95365 584 aa16.02■□□□□ 0.16
SF3B3-206ENST00000565990 IGKV5-2P06315 115 aa16.02■□□□□ 0.16
SF3B3-206ENST00000565990 TRIM27P14373 513 aa16.02■□□□□ 0.16
SF3B3-206ENST00000565990 LINS1Q8NG48 757 aa16.02■□□□□ 0.16
SF3B3-206ENST00000565990 NIP7Q9Y221 180 aaKnown RBP eCLIP16.02■□□□□ 0.16
SF3B3-206ENST00000565990 AFDNP55196 1824 aaKnown RBP16.02■□□□□ 0.16
SF3B3-206ENST00000565990 POLRMTO00411 1230 aaKnown RBP16.01■□□□□ 0.15
SF3B3-206ENST00000565990 PTGER2P43116 358 aa16.01■□□□□ 0.15
SF3B3-206ENST00000565990 PARP10Q53GL7 1025 aa16.01■□□□□ 0.15
SF3B3-206ENST00000565990 INTS3Q68E01 1043 aaKnown RBP16.01■□□□□ 0.15
SF3B3-206ENST00000565990 NLRP10Q86W26 655 aa16.01■□□□□ 0.15
SF3B3-206ENST00000565990 CCDC191Q8NCU4 936 aa16.01■□□□□ 0.15
SF3B3-206ENST00000565990 FRAT1Q92837 279 aaPredicted RBP16.01■□□□□ 0.15
SF3B3-206ENST00000565990 MYD88Q99836 296 aa16.01■□□□□ 0.15
SF3B3-206ENST00000565990 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
SF3B3-206ENST00000565990 NRXN2Q9P2S2 1712 aa16.01■□□□□ 0.15
SF3B3-206ENST00000565990 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
SF3B3-206ENST00000565990 UBN2Q6ZU65 1347 aa16■□□□□ 0.15
SF3B3-206ENST00000565990 ATP5J2-PTCD1G3V325 749 aa16■□□□□ 0.15
SF3B3-206ENST00000565990 ALDH1L1O75891 902 aa16■□□□□ 0.15
SF3B3-206ENST00000565990 MMP10P09238 476 aa16■□□□□ 0.15
SF3B3-206ENST00000565990 DDR1Q08345 913 aa16■□□□□ 0.15
SF3B3-206ENST00000565990 NEXNQ0ZGT2 675 aa16■□□□□ 0.15
SF3B3-206ENST00000565990 SUSD4Q5VX71 490 aa16■□□□□ 0.15
SF3B3-206ENST00000565990 ABCC4O15439 1325 aa15.99■□□□□ 0.15
SF3B3-206ENST00000565990 NEURL1BA8MQ27 555 aa15.99■□□□□ 0.15
SF3B3-206ENST00000565990 MSL1Q68DK7 614 aa15.99■□□□□ 0.15
SF3B3-206ENST00000565990 SPON1Q9HCB6 807 aa15.99■□□□□ 0.15
SF3B3-206ENST00000565990 CARMIL3Q8ND23 1372 aa15.99■□□□□ 0.15
SF3B3-206ENST00000565990 PXDNLA1KZ92 1463 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 H7C1W4 665 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 SERPINB2P05120 415 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 GPTP24298 496 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 CCT4P50991 539 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms