RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
CFDP1-205ENST00000565646 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
CFDP1-205ENST00000565646 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
CFDP1-205ENST00000565646 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
CFDP1-205ENST00000565646 GOLGB1Q14789 3259 aaKnown RBP16.34■□□□□ 0.21
CFDP1-205ENST00000565646 COL15A1P39059 1388 aa16.34■□□□□ 0.21
CFDP1-205ENST00000565646 NUP98P52948 1817 aa16.33■□□□□ 0.21
CFDP1-205ENST00000565646 YBX3P16989 372 aaKnown RBP eCLIP16.33■□□□□ 0.2
CFDP1-205ENST00000565646 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.2
CFDP1-205ENST00000565646 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
CFDP1-205ENST00000565646 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.2
CFDP1-205ENST00000565646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.32■□□□□ 0.2
CFDP1-205ENST00000565646 SSFA2P28290 1259 aa16.32■□□□□ 0.2
CFDP1-205ENST00000565646 SCN7AQ01118 1682 aa16.32■□□□□ 0.2
CFDP1-205ENST00000565646 MSL1Q68DK7 614 aa16.32■□□□□ 0.2
CFDP1-205ENST00000565646 COPS6Q7L5N1 327 aa16.32■□□□□ 0.2
CFDP1-205ENST00000565646 ARHGEF1Q92888 912 aaKnown RBP16.32■□□□□ 0.2
CFDP1-205ENST00000565646 PHF14O94880 888 aa16.31■□□□□ 0.2
CFDP1-205ENST00000565646 ADRA2BP18089 450 aa16.31■□□□□ 0.2
CFDP1-205ENST00000565646 FLIIQ13045 1269 aa16.31■□□□□ 0.2
CFDP1-205ENST00000565646 ZNF330Q9Y3S2 320 aaPredicted RBP16.31■□□□□ 0.2
CFDP1-205ENST00000565646 AIMP1Q12904 312 aaKnown RBP16.3■□□□□ 0.2
CFDP1-205ENST00000565646 TBC1D2BQ9UPU7 963 aa16.3■□□□□ 0.2
CFDP1-205ENST00000565646 CAMTA2O94983 1202 aa16.29■□□□□ 0.2
CFDP1-205ENST00000565646 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
CFDP1-205ENST00000565646 DZIP3Q86Y13 1208 aaKnown RBP16.29■□□□□ 0.2
CFDP1-205ENST00000565646 ANKRD36CQ5JPF3 1778 aa16.28■□□□□ 0.2
CFDP1-205ENST00000565646 ADCY9O60503 1353 aa16.28■□□□□ 0.2
CFDP1-205ENST00000565646 MAP3K15Q6ZN16 1313 aa16.28■□□□□ 0.2
CFDP1-205ENST00000565646 BCL2L12Q9HB09 334 aa16.28■□□□□ 0.2
CFDP1-205ENST00000565646 SRP68Q9UHB9 627 aaKnown RBP16.28■□□□□ 0.2
CFDP1-205ENST00000565646 NARFQ9UHQ1 456 aa16.28■□□□□ 0.2
CFDP1-205ENST00000565646 NOB1Q9ULX3 412 aaKnown RBP16.28■□□□□ 0.2
CFDP1-205ENST00000565646 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
CFDP1-205ENST00000565646 KIF16BQ96L93 1317 aa16.27■□□□□ 0.2
CFDP1-205ENST00000565646 USP42Q9H9J4 1324 aaKnown RBP16.27■□□□□ 0.2
CFDP1-205ENST00000565646 A0A087WZG4 1122 aa16.27■□□□□ 0.2
CFDP1-205ENST00000565646 ANKRD13DQ6ZTN6 518 aa16.27■□□□□ 0.2
CFDP1-205ENST00000565646 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.2
CFDP1-205ENST00000565646 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.2
CFDP1-205ENST00000565646 PTPRCP08575 1304 aa16.26■□□□□ 0.19
CFDP1-205ENST00000565646 PI4KAP2A4QPH2 592 aa16.26■□□□□ 0.19
CFDP1-205ENST00000565646 ERVV-1B6SEH8 477 aa16.26■□□□□ 0.19
CFDP1-205ENST00000565646 RFC4P35249 363 aa16.26■□□□□ 0.19
CFDP1-205ENST00000565646 FKBP5Q13451 457 aaPredicted RBP16.26■□□□□ 0.19
CFDP1-205ENST00000565646 HLFQ16534 295 aa16.26■□□□□ 0.19
CFDP1-205ENST00000565646 PI4KAP1Q8N8J0 262 aa16.26■□□□□ 0.19
CFDP1-205ENST00000565646 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
CFDP1-205ENST00000565646 ZBTB3Q9H5J0 574 aa16.26■□□□□ 0.19
CFDP1-205ENST00000565646 TNNQ9UQP3 1299 aa16.26■□□□□ 0.19
CFDP1-205ENST00000565646 F6X3S4 739 aa16.25■□□□□ 0.19
CFDP1-205ENST00000565646 USPL1Q5W0Q7 1092 aa16.25■□□□□ 0.19
CFDP1-205ENST00000565646 KSR2Q6VAB6 950 aa16.25■□□□□ 0.19
CFDP1-205ENST00000565646 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
CFDP1-205ENST00000565646 NPM2Q86SE8 214 aaKnown RBP16.25■□□□□ 0.19
CFDP1-205ENST00000565646 ARHGAP45Q92619 1136 aa16.25■□□□□ 0.19
CFDP1-205ENST00000565646 AFDNP55196 1824 aaKnown RBP16.24■□□□□ 0.19
CFDP1-205ENST00000565646 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
CFDP1-205ENST00000565646 PLIN1O60240 522 aa16.24■□□□□ 0.19
CFDP1-205ENST00000565646 DDX58O95786 925 aaKnown RBP16.24■□□□□ 0.19
CFDP1-205ENST00000565646 GYS1P13807 737 aa16.24■□□□□ 0.19
CFDP1-205ENST00000565646 TRIM27P14373 513 aa16.24■□□□□ 0.19
CFDP1-205ENST00000565646 GIGYF2Q6Y7W6 1299 aaKnown RBP16.24■□□□□ 0.19
CFDP1-205ENST00000565646 FRAT1Q92837 279 aaPredicted RBP16.24■□□□□ 0.19
CFDP1-205ENST00000565646 MAP3K2Q9Y2U5 619 aa16.24■□□□□ 0.19
CFDP1-205ENST00000565646 ATP10DQ9P241 1426 aa16.24■□□□□ 0.19
CFDP1-205ENST00000565646 RGL2O15211 777 aa16.23■□□□□ 0.19
CFDP1-205ENST00000565646 ZPR1O75312 459 aa16.23■□□□□ 0.19
CFDP1-205ENST00000565646 IFFO2Q5TF58 517 aa16.23■□□□□ 0.19
CFDP1-205ENST00000565646 ATF7IPQ6VMQ6 1270 aa16.23■□□□□ 0.19
CFDP1-205ENST00000565646 RIC3Q7Z5B4 369 aa16.23■□□□□ 0.19
CFDP1-205ENST00000565646 DNAAF4Q8WXU2 420 aa16.23■□□□□ 0.19
CFDP1-205ENST00000565646 GPBP1L1Q9HC44 474 aaPredicted RBP16.23■□□□□ 0.19
CFDP1-205ENST00000565646 IPO8O15397 1037 aaKnown RBP16.22■□□□□ 0.19
CFDP1-205ENST00000565646 CENPBP07199 599 aaPredicted RBP16.22■□□□□ 0.19
CFDP1-205ENST00000565646 FKBP8Q14318 412 aa16.22■□□□□ 0.19
CFDP1-205ENST00000565646 ZKSCAN2Q63HK3 967 aa16.22■□□□□ 0.19
CFDP1-205ENST00000565646 CLEC4GQ6UXB4 293 aa16.22■□□□□ 0.19
CFDP1-205ENST00000565646 METTL22Q9BUU2 404 aaPredicted RBP16.22■□□□□ 0.19
CFDP1-205ENST00000565646 ABCC4O15439 1325 aa16.21■□□□□ 0.19
CFDP1-205ENST00000565646 RLBP1P12271 317 aa16.21■□□□□ 0.19
CFDP1-205ENST00000565646 RRP1P56182 461 aaKnown RBP16.21■□□□□ 0.19
CFDP1-205ENST00000565646 TCIRG1Q13488 830 aa16.21■□□□□ 0.19
CFDP1-205ENST00000565646 ZNF526Q8TF50 670 aaPredicted RBP16.21■□□□□ 0.19
CFDP1-205ENST00000565646 API5Q9BZZ5 524 aaKnown RBP16.21■□□□□ 0.19
CFDP1-205ENST00000565646 SUPT16HQ9Y5B9 1047 aaKnown RBP16.21■□□□□ 0.19
CFDP1-205ENST00000565646 PXDNLA1KZ92 1463 aa16.21■□□□□ 0.19
CFDP1-205ENST00000565646 IGKV5-2P06315 115 aa16.2■□□□□ 0.18
CFDP1-205ENST00000565646 TBC1D9BQ66K14 1250 aa16.2■□□□□ 0.18
CFDP1-205ENST00000565646 ZNF34Q8IZ26 560 aa16.2■□□□□ 0.18
CFDP1-205ENST00000565646 MYD88Q99836 296 aa16.2■□□□□ 0.18
CFDP1-205ENST00000565646 ISCA1Q9BUE6 129 aa16.2■□□□□ 0.18
CFDP1-205ENST00000565646 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
CFDP1-205ENST00000565646 ATP5J2-PTCD1G3V325 749 aa16.19■□□□□ 0.18
CFDP1-205ENST00000565646 BEND3Q5T5X7 828 aa16.19■□□□□ 0.18
CFDP1-205ENST00000565646 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
CFDP1-205ENST00000565646 CLUAP1Q96AJ1 413 aa16.19■□□□□ 0.18
CFDP1-205ENST00000565646 ZNF652Q9Y2D9 606 aa16.19■□□□□ 0.18
CFDP1-205ENST00000565646 CEP350Q5VT06 3117 aa16.19■□□□□ 0.18
CFDP1-205ENST00000565646 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms