RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 BTBD11A6QL63 1104 aa12.68□□□□□ -0.38
CNOT1-207ENST00000565605 DDR1Q08345 913 aa12.68□□□□□ -0.38
CNOT1-207ENST00000565605 ZNF790Q6PG37 636 aa12.68□□□□□ -0.38
CNOT1-207ENST00000565605 RBM46Q8TBY0 533 aaKnown RBP12.68□□□□□ -0.38
CNOT1-207ENST00000565605 RUNDC1Q96C34 613 aa12.68□□□□□ -0.38
CNOT1-207ENST00000565605 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
CNOT1-207ENST00000565605 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
CNOT1-207ENST00000565605 RIPK4P57078 832 aa12.67□□□□□ -0.38
CNOT1-207ENST00000565605 LMOD3Q0VAK6 560 aa12.67□□□□□ -0.38
CNOT1-207ENST00000565605 FKBP8Q14318 412 aa12.67□□□□□ -0.38
CNOT1-207ENST00000565605 DNAJC10Q8IXB1 793 aa12.67□□□□□ -0.38
CNOT1-207ENST00000565605 PIM2Q9P1W9 311 aa12.67□□□□□ -0.38
CNOT1-207ENST00000565605 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
CNOT1-207ENST00000565605 CHRNA5P30532 468 aa12.66□□□□□ -0.38
CNOT1-207ENST00000565605 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
CNOT1-207ENST00000565605 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
CNOT1-207ENST00000565605 COL13A1Q5TAT6 717 aaPredicted RBP12.66□□□□□ -0.38
CNOT1-207ENST00000565605 VSIG10Q8N0Z9 540 aa12.66□□□□□ -0.38
CNOT1-207ENST00000565605 PNISRQ8TF01 805 aaKnown RBP12.66□□□□□ -0.38
CNOT1-207ENST00000565605 FMNL2Q96PY5 1086 aa12.66□□□□□ -0.38
CNOT1-207ENST00000565605 MRS2Q9HD23 443 aa12.66□□□□□ -0.38
CNOT1-207ENST00000565605 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
CNOT1-207ENST00000565605 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
CNOT1-207ENST00000565605 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
CNOT1-207ENST00000565605 TAF7Q15545 349 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-207ENST00000565605 CCDC184Q52MB2 194 aa12.65□□□□□ -0.38
CNOT1-207ENST00000565605 DALRD3Q5D0E6 543 aaKnown RBP12.65□□□□□ -0.38
CNOT1-207ENST00000565605 KLRG1Q96E93 195 aa12.65□□□□□ -0.38
CNOT1-207ENST00000565605 ZNF496Q96IT1 587 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-207ENST00000565605 RRAGCQ9HB90 399 aa12.65□□□□□ -0.38
CNOT1-207ENST00000565605 RRP7AQ9Y3A4 280 aaKnown RBP12.65□□□□□ -0.38
CNOT1-207ENST00000565605 HEG1Q9ULI3 1381 aa12.65□□□□□ -0.38
CNOT1-207ENST00000565605 TJP1Q07157 1748 aa12.65□□□□□ -0.38
CNOT1-207ENST00000565605 USP42Q9H9J4 1324 aaKnown RBP12.64□□□□□ -0.39
CNOT1-207ENST00000565605 SIPA1L3O60292 1781 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-207ENST00000565605 CYP19A1P11511 503 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-207ENST00000565605 NEUROD2Q15784 382 aa12.64□□□□□ -0.39
CNOT1-207ENST00000565605 INTS5Q6P9B9 1019 aaKnown RBP12.64□□□□□ -0.39
CNOT1-207ENST00000565605 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-207ENST00000565605 JMYQ8N9B5 988 aa12.64□□□□□ -0.39
CNOT1-207ENST00000565605 THUMPD2Q9BTF0 503 aaKnown RBP12.64□□□□□ -0.39
CNOT1-207ENST00000565605 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-207ENST00000565605 RNF181Q9P0P0 153 aa12.64□□□□□ -0.39
CNOT1-207ENST00000565605 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
CNOT1-207ENST00000565605 WDR90Q96KV7 1748 aa12.63□□□□□ -0.39
CNOT1-207ENST00000565605 KCNQ3O43525 872 aa12.63□□□□□ -0.39
CNOT1-207ENST00000565605 SEC24BO95487 1268 aa12.63□□□□□ -0.39
CNOT1-207ENST00000565605 STARD3NLO95772 234 aa12.63□□□□□ -0.39
CNOT1-207ENST00000565605 TM4SF1P30408 202 aa12.63□□□□□ -0.39
CNOT1-207ENST00000565605 FSTL1Q12841 308 aa12.63□□□□□ -0.39
CNOT1-207ENST00000565605 POLRMTO00411 1230 aaKnown RBP12.62□□□□□ -0.39
CNOT1-207ENST00000565605 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
CNOT1-207ENST00000565605 ARFGEF1Q9Y6D6 1849 aa12.61□□□□□ -0.39
CNOT1-207ENST00000565605 SPDYE4A6NLX3 237 aa12.61□□□□□ -0.39
CNOT1-207ENST00000565605 PRELPP51888 382 aa12.61□□□□□ -0.39
CNOT1-207ENST00000565605 RASSF7Q02833 373 aa12.61□□□□□ -0.39
CNOT1-207ENST00000565605 BMP2KQ9NSY1 1161 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-207ENST00000565605 MIS18AQ9NYP9 233 aa12.61□□□□□ -0.39
CNOT1-207ENST00000565605 DLG5Q8TDM6 1919 aa12.6□□□□□ -0.39
CNOT1-207ENST00000565605 APAF1O14727 1248 aa12.6□□□□□ -0.39
CNOT1-207ENST00000565605 SNRPA1P09661 255 aaKnown RBP12.6□□□□□ -0.39
CNOT1-207ENST00000565605 USPL1Q5W0Q7 1092 aa12.6□□□□□ -0.39
CNOT1-207ENST00000565605 ZBTB1Q9Y2K1 713 aa12.6□□□□□ -0.39
CNOT1-207ENST00000565605 SOS1Q07889 1333 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-207ENST00000565605 CANXP27824 592 aaKnown RBP12.59□□□□□ -0.39
CNOT1-207ENST00000565605 NPM2Q86SE8 214 aaKnown RBP12.59□□□□□ -0.39
CNOT1-207ENST00000565605 TSPYL4Q9UJ04 414 aa12.59□□□□□ -0.39
CNOT1-207ENST00000565605 COL15A1P39059 1388 aa12.58□□□□□ -0.4
CNOT1-207ENST00000565605 ZPR1O75312 459 aa12.58□□□□□ -0.4
CNOT1-207ENST00000565605 NFIXQ14938 502 aa12.58□□□□□ -0.4
CNOT1-207ENST00000565605 SMC1BQ8NDV3 1235 aa12.58□□□□□ -0.4
CNOT1-207ENST00000565605 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.4
CNOT1-207ENST00000565605 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
CNOT1-207ENST00000565605 TRIM35Q9UPQ4 493 aa12.58□□□□□ -0.4
CNOT1-207ENST00000565605 ZNF330Q9Y3S2 320 aaPredicted RBP12.58□□□□□ -0.4
CNOT1-207ENST00000565605 KDM3BQ7LBC6 1761 aa12.57□□□□□ -0.4
CNOT1-207ENST00000565605 A0A087WZG4 1122 aa12.57□□□□□ -0.4
CNOT1-207ENST00000565605 PRAMEF22A3QJZ6 481 aa12.57□□□□□ -0.4
CNOT1-207ENST00000565605 EIF4A1P60842 406 aaKnown RBP12.57□□□□□ -0.4
CNOT1-207ENST00000565605 CALD1Q05682 793 aaKnown RBP12.57□□□□□ -0.4
CNOT1-207ENST00000565605 MMRN1Q13201 1228 aa12.57□□□□□ -0.4
CNOT1-207ENST00000565605 TRPC6Q9Y210 931 aa12.57□□□□□ -0.4
CNOT1-207ENST00000565605 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
CNOT1-207ENST00000565605 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
CNOT1-207ENST00000565605 A1BGP04217 495 aa12.56□□□□□ -0.4
CNOT1-207ENST00000565605 IL6STP40189 918 aaPredicted RBP12.56□□□□□ -0.4
CNOT1-207ENST00000565605 KIF12Q96FN5 646 aa12.56□□□□□ -0.4
CNOT1-207ENST00000565605 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
CNOT1-207ENST00000565605 SBF1O95248 1867 aa12.56□□□□□ -0.4
CNOT1-207ENST00000565605 GLTPD2A6NH11 291 aa12.55□□□□□ -0.4
CNOT1-207ENST00000565605 POTECB2RU33 542 aa12.55□□□□□ -0.4
CNOT1-207ENST00000565605 ST18O60284 1047 aa12.55□□□□□ -0.4
CNOT1-207ENST00000565605 LMNB1P20700 586 aa12.55□□□□□ -0.4
CNOT1-207ENST00000565605 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
CNOT1-207ENST00000565605 FAM9BQ8IZU0 186 aa12.55□□□□□ -0.4
CNOT1-207ENST00000565605 TNS4Q8IZW8 715 aa12.55□□□□□ -0.4
CNOT1-207ENST00000565605 NARFQ9UHQ1 456 aa12.55□□□□□ -0.4
CNOT1-207ENST00000565605 TNRC6CQ9HCJ0 1690 aaKnown RBP12.54□□□□□ -0.4
CNOT1-207ENST00000565605 NFKBIEO00221 500 aa12.54□□□□□ -0.4
CNOT1-207ENST00000565605 SERPINB2P05120 415 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms