RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
CCNDBP1-206ENST00000565296 SGIP1Q9BQI5 828 aa17.84■□□□□ 0.45
CCNDBP1-206ENST00000565296 CHMP4AQ9BY43 222 aa17.84■□□□□ 0.45
CCNDBP1-206ENST00000565296 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
CCNDBP1-206ENST00000565296 AIMP1Q12904 312 aaKnown RBP17.82■□□□□ 0.44
CCNDBP1-206ENST00000565296 HLFQ16534 295 aa17.82■□□□□ 0.44
CCNDBP1-206ENST00000565296 G2E3Q7L622 706 aa17.82■□□□□ 0.44
CCNDBP1-206ENST00000565296 STK31Q9BXU1 1019 aa17.82■□□□□ 0.44
CCNDBP1-206ENST00000565296 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
CCNDBP1-206ENST00000565296 NLGN1Q8N2Q7 840 aa17.82■□□□□ 0.44
CCNDBP1-206ENST00000565296 ZBTB3Q9H5J0 574 aa17.82■□□□□ 0.44
CCNDBP1-206ENST00000565296 SPON1Q9HCB6 807 aa17.81■□□□□ 0.44
CCNDBP1-206ENST00000565296 ERVV-1B6SEH8 477 aa17.8■□□□□ 0.44
CCNDBP1-206ENST00000565296 CT47B1P0C2W7 299 aaPredicted RBP17.8■□□□□ 0.44
CCNDBP1-206ENST00000565296 KIF6Q6ZMV9 814 aa17.8■□□□□ 0.44
CCNDBP1-206ENST00000565296 SSH1Q8WYL5 1049 aa17.8■□□□□ 0.44
CCNDBP1-206ENST00000565296 ANP32EQ9BTT0 268 aa17.8■□□□□ 0.44
CCNDBP1-206ENST00000565296 SCN7AQ01118 1682 aa17.8■□□□□ 0.44
CCNDBP1-206ENST00000565296 TM4SF1P30408 202 aa17.79■□□□□ 0.44
CCNDBP1-206ENST00000565296 TBC1D9BQ66K14 1250 aa17.79■□□□□ 0.44
CCNDBP1-206ENST00000565296 RGL2O15211 777 aa17.79■□□□□ 0.44
CCNDBP1-206ENST00000565296 MMP10P09238 476 aa17.79■□□□□ 0.44
CCNDBP1-206ENST00000565296 NFIXQ14938 502 aa17.79■□□□□ 0.44
CCNDBP1-206ENST00000565296 CLEC4GQ6UXB4 293 aa17.79■□□□□ 0.44
CCNDBP1-206ENST00000565296 ZNF428Q96B54 188 aa17.79■□□□□ 0.44
CCNDBP1-206ENST00000565296 COL24A1Q17RW2 1714 aa17.78■□□□□ 0.44
CCNDBP1-206ENST00000565296 DDR1Q08345 913 aa17.78■□□□□ 0.44
CCNDBP1-206ENST00000565296 ANKRD13DQ6ZTN6 518 aa17.78■□□□□ 0.44
CCNDBP1-206ENST00000565296 MRPL50Q8N5N7 158 aaKnown RBP17.78■□□□□ 0.44
CCNDBP1-206ENST00000565296 BCL2L13Q9BXK5 485 aa17.78■□□□□ 0.44
CCNDBP1-206ENST00000565296 FLIIQ13045 1269 aa17.77■□□□□ 0.44
CCNDBP1-206ENST00000565296 BCORQ6W2J9 1755 aa17.77■□□□□ 0.44
CCNDBP1-206ENST00000565296 RARSP54136 660 aaKnown RBP17.77■□□□□ 0.43
CCNDBP1-206ENST00000565296 ALDH1L2Q3SY69 923 aa17.77■□□□□ 0.43
CCNDBP1-206ENST00000565296 GIGYF2Q6Y7W6 1299 aaKnown RBP17.77■□□□□ 0.43
CCNDBP1-206ENST00000565296 PLBD2Q8NHP8 589 aa17.77■□□□□ 0.43
CCNDBP1-206ENST00000565296 BICDL1Q6ZP65 573 aa17.76■□□□□ 0.43
CCNDBP1-206ENST00000565296 ZNF652Q9Y2D9 606 aa17.76■□□□□ 0.43
CCNDBP1-206ENST00000565296 POLRMTO00411 1230 aaKnown RBP17.75■□□□□ 0.43
CCNDBP1-206ENST00000565296 ADCY9O60503 1353 aa17.75■□□□□ 0.43
CCNDBP1-206ENST00000565296 POLD1P28340 1107 aa17.75■□□□□ 0.43
CCNDBP1-206ENST00000565296 ATP10DQ9P241 1426 aa17.74■□□□□ 0.43
CCNDBP1-206ENST00000565296 PI4KAP2A4QPH2 592 aa17.74■□□□□ 0.43
CCNDBP1-206ENST00000565296 ZNF34Q8IZ26 560 aa17.74■□□□□ 0.43
CCNDBP1-206ENST00000565296 PI4KAP1Q8N8J0 262 aa17.74■□□□□ 0.43
CCNDBP1-206ENST00000565296 SMC4Q9NTJ3 1288 aa17.74■□□□□ 0.43
CCNDBP1-206ENST00000565296 NIP7Q9Y221 180 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCNDBP1-206ENST00000565296 UBN2Q6ZU65 1347 aa17.73■□□□□ 0.43
CCNDBP1-206ENST00000565296 KSR2Q6VAB6 950 aa17.73■□□□□ 0.43
CCNDBP1-206ENST00000565296 RIC3Q7Z5B4 369 aa17.73■□□□□ 0.43
CCNDBP1-206ENST00000565296 SETDB2Q96T68 719 aa17.73■□□□□ 0.43
CCNDBP1-206ENST00000565296 DDX58O95786 925 aaKnown RBP17.72■□□□□ 0.43
CCNDBP1-206ENST00000565296 GPTP24298 496 aa17.72■□□□□ 0.43
CCNDBP1-206ENST00000565296 FKBP5Q13451 457 aaPredicted RBP17.72■□□□□ 0.43
CCNDBP1-206ENST00000565296 TCIRG1Q13488 830 aa17.72■□□□□ 0.43
CCNDBP1-206ENST00000565296 MAP3K2Q9Y2U5 619 aa17.72■□□□□ 0.43
CCNDBP1-206ENST00000565296 BCAR3O75815 825 aa17.72■□□□□ 0.43
CCNDBP1-206ENST00000565296 BRPF1P55201 1214 aaPredicted RBP17.72■□□□□ 0.43
CCNDBP1-206ENST00000565296 ERICH6BQ5W0A0 696 aa17.72■□□□□ 0.43
CCNDBP1-206ENST00000565296 PARP3Q9Y6F1 533 aa17.72■□□□□ 0.43
CCNDBP1-206ENST00000565296 LRP5O75197 1615 aa17.72■□□□□ 0.43
CCNDBP1-206ENST00000565296 CARMIL3Q8ND23 1372 aa17.71■□□□□ 0.43
CCNDBP1-206ENST00000565296 GOLGB1Q14789 3259 aaKnown RBP17.71■□□□□ 0.43
CCNDBP1-206ENST00000565296 F6X3S4 739 aa17.7■□□□□ 0.42
CCNDBP1-206ENST00000565296 ATP5J2-PTCD1G3V325 749 aa17.7■□□□□ 0.42
CCNDBP1-206ENST00000565296 SERPINB2P05120 415 aa17.7■□□□□ 0.42
CCNDBP1-206ENST00000565296 ISCA1Q9BUE6 129 aa17.7■□□□□ 0.42
CCNDBP1-206ENST00000565296 METTL22Q9BUU2 404 aaPredicted RBP17.7■□□□□ 0.42
CCNDBP1-206ENST00000565296 HSP90AB3PQ58FF7 597 aa17.7■□□□□ 0.42
CCNDBP1-206ENST00000565296 NLRP10Q86W26 655 aa17.7■□□□□ 0.42
CCNDBP1-206ENST00000565296 SUSD4Q5VX71 490 aa17.69■□□□□ 0.42
CCNDBP1-206ENST00000565296 MYD88Q99836 296 aa17.69■□□□□ 0.42
CCNDBP1-206ENST00000565296 NOB1Q9ULX3 412 aaKnown RBP17.69■□□□□ 0.42
CCNDBP1-206ENST00000565296 NUP98P52948 1817 aa17.69■□□□□ 0.42
CCNDBP1-206ENST00000565296 IGKV5-2P06315 115 aa17.68■□□□□ 0.42
CCNDBP1-206ENST00000565296 TRIM28Q13263 835 aaKnown RBP17.68■□□□□ 0.42
CCNDBP1-206ENST00000565296 DNAAF4Q8WXU2 420 aa17.68■□□□□ 0.42
CCNDBP1-206ENST00000565296 PTPRCP08575 1304 aa17.68■□□□□ 0.42
CCNDBP1-206ENST00000565296 ARFGEF2Q9Y6D5 1785 aa17.68■□□□□ 0.42
CCNDBP1-206ENST00000565296 FAM177BA6PVY3 158 aa17.68■□□□□ 0.42
CCNDBP1-206ENST00000565296 PRR5LQ6MZQ0 368 aa17.68■□□□□ 0.42
CCNDBP1-206ENST00000565296 PARP10Q53GL7 1025 aa17.67■□□□□ 0.42
CCNDBP1-206ENST00000565296 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
CCNDBP1-206ENST00000565296 CCDC24Q8N4L8 307 aa17.67■□□□□ 0.42
CCNDBP1-206ENST00000565296 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
CCNDBP1-206ENST00000565296 C10orf71Q711Q0 1435 aa17.67■□□□□ 0.42
CCNDBP1-206ENST00000565296 CACNA1FO60840 1977 aa17.66■□□□□ 0.42
CCNDBP1-206ENST00000565296 NTSR2O95665 410 aa17.66■□□□□ 0.42
CCNDBP1-206ENST00000565296 FHDC1Q9C0D6 1143 aaPredicted RBP17.66■□□□□ 0.42
CCNDBP1-206ENST00000565296 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
CCNDBP1-206ENST00000565296 CWF19L2Q2TBE0 894 aaKnown RBP17.65■□□□□ 0.42
CCNDBP1-206ENST00000565296 CNBD1Q8NA66 436 aa17.65■□□□□ 0.42
CCNDBP1-206ENST00000565296 BEND3Q5T5X7 828 aa17.65■□□□□ 0.42
CCNDBP1-206ENST00000565296 TPTE2Q6XPS3 522 aa17.65■□□□□ 0.42
CCNDBP1-206ENST00000565296 NUTM1Q86Y26 1132 aa17.65■□□□□ 0.42
CCNDBP1-206ENST00000565296 RCAN3Q9UKA8 241 aa17.65■□□□□ 0.42
CCNDBP1-206ENST00000565296 IBTKQ9P2D0 1353 aaPredicted RBP17.65■□□□□ 0.42
CCNDBP1-206ENST00000565296 NEURL1BA8MQ27 555 aa17.64■□□□□ 0.41
CCNDBP1-206ENST00000565296 SYNE4Q8N205 404 aa17.64■□□□□ 0.41
CCNDBP1-206ENST00000565296 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms