RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 KIF6Q6ZMV9 814 aa23.9■■□□□ 1.42
SYNGR3-204ENST00000564642 ERVV-1B6SEH8 477 aa23.88■■□□□ 1.41
SYNGR3-204ENST00000564642 HLFQ16534 295 aa23.88■■□□□ 1.41
SYNGR3-204ENST00000564642 DALRD3Q5D0E6 543 aaKnown RBP23.88■■□□□ 1.41
SYNGR3-204ENST00000564642 PRR5LQ6MZQ0 368 aa23.88■■□□□ 1.41
SYNGR3-204ENST00000564642 CNBD1Q8NA66 436 aa23.88■■□□□ 1.41
SYNGR3-204ENST00000564642 NECTIN2Q92692 538 aa23.88■■□□□ 1.41
SYNGR3-204ENST00000564642 NIP7Q9Y221 180 aaKnown RBP eCLIP23.88■■□□□ 1.41
SYNGR3-204ENST00000564642 MAP3K15Q6ZN16 1313 aa23.87■■□□□ 1.41
SYNGR3-204ENST00000564642 H0YIN7 160 aa23.87■■□□□ 1.41
SYNGR3-204ENST00000564642 GNAI1P63096 354 aa23.87■■□□□ 1.41
SYNGR3-204ENST00000564642 ST5P78524 1137 aa23.87■■□□□ 1.41
SYNGR3-204ENST00000564642 KRT24Q2M2I5 525 aa23.87■■□□□ 1.41
SYNGR3-204ENST00000564642 NBPF5PQ86XG9 351 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-204ENST00000564642 C2CD5Q86YS7 1000 aa23.87■■□□□ 1.41
SYNGR3-204ENST00000564642 BRIP1Q9BX63 1249 aa23.87■■□□□ 1.41
SYNGR3-204ENST00000564642 MBIPQ9NS73 344 aa23.87■■□□□ 1.41
SYNGR3-204ENST00000564642 NUP98P52948 1817 aa23.87■■□□□ 1.41
SYNGR3-204ENST00000564642 PDE6BP35913 854 aa23.86■■□□□ 1.41
SYNGR3-204ENST00000564642 TTLL7Q6ZT98 887 aa23.86■■□□□ 1.41
SYNGR3-204ENST00000564642 ARHGAP27Q6ZUM4 889 aa23.86■■□□□ 1.41
SYNGR3-204ENST00000564642 CCDC24Q8N4L8 307 aa23.86■■□□□ 1.41
SYNGR3-204ENST00000564642 IFT57Q9NWB7 429 aa23.86■■□□□ 1.41
SYNGR3-204ENST00000564642 PDZRN3Q9UPQ7 1066 aa23.86■■□□□ 1.41
SYNGR3-204ENST00000564642 ARFGEF1Q9Y6D6 1849 aa23.86■■□□□ 1.41
SYNGR3-204ENST00000564642 GOLGB1Q14789 3259 aaKnown RBP23.85■■□□□ 1.41
SYNGR3-204ENST00000564642 ZNF853P0CG23 659 aa23.85■■□□□ 1.41
SYNGR3-204ENST00000564642 TPTE2Q6XPS3 522 aa23.85■■□□□ 1.41
SYNGR3-204ENST00000564642 ANKRD31Q8N7Z5 1873 aa23.84■■□□□ 1.41
SYNGR3-204ENST00000564642 HOXB7P09629 217 aa23.84■■□□□ 1.41
SYNGR3-204ENST00000564642 PDIA6Q15084 440 aa23.84■■□□□ 1.41
SYNGR3-204ENST00000564642 ZBTB3Q9H5J0 574 aa23.84■■□□□ 1.41
SYNGR3-204ENST00000564642 DLEC1Q9Y238 1755 aa23.83■■□□□ 1.41
SYNGR3-204ENST00000564642 FAM177BA6PVY3 158 aa23.83■■□□□ 1.41
SYNGR3-204ENST00000564642 ANXA1P04083 346 aa23.83■■□□□ 1.41
SYNGR3-204ENST00000564642 CCDC27Q2M243 656 aa23.82■■□□□ 1.4
SYNGR3-204ENST00000564642 PROSER3Q2NL68 480 aa23.82■■□□□ 1.4
SYNGR3-204ENST00000564642 HDGFL1Q5TGJ6 251 aa23.82■■□□□ 1.4
SYNGR3-204ENST00000564642 DUSP27Q5VZP5 1158 aa23.82■■□□□ 1.4
SYNGR3-204ENST00000564642 TTLL6Q8N841 843 aa23.82■■□□□ 1.4
SYNGR3-204ENST00000564642 DDX21Q9NR30 783 aaKnown RBP eCLIP23.82■■□□□ 1.4
SYNGR3-204ENST00000564642 GTF2E1P29083 439 aaPredicted RBP23.81■■□□□ 1.4
SYNGR3-204ENST00000564642 FAM9BQ8IZU0 186 aa23.81■■□□□ 1.4
SYNGR3-204ENST00000564642 ZNF622Q969S3 477 aaKnown RBP eCLIP23.81■■□□□ 1.4
SYNGR3-204ENST00000564642 AIMP1Q12904 312 aaKnown RBP23.8■■□□□ 1.4
SYNGR3-204ENST00000564642 GIGYF2Q6Y7W6 1299 aaKnown RBP23.8■■□□□ 1.4
SYNGR3-204ENST00000564642 COPS6Q7L5N1 327 aa23.8■■□□□ 1.4
SYNGR3-204ENST00000564642 LRP10Q7Z4F1 713 aa23.8■■□□□ 1.4
SYNGR3-204ENST00000564642 WWC1Q8IX03 1113 aa23.79■■□□□ 1.4
SYNGR3-204ENST00000564642 NYXQ9GZU5 481 aa23.79■■□□□ 1.4
SYNGR3-204ENST00000564642 CHPF2Q9P2E5 772 aa23.79■■□□□ 1.4
SYNGR3-204ENST00000564642 ATP10DQ9P241 1426 aa23.78■■□□□ 1.4
SYNGR3-204ENST00000564642 NCBP3Q53F19 620 aaKnown RBP23.78■■□□□ 1.4
SYNGR3-204ENST00000564642 XAGE3Q8WTP9 111 aa23.78■■□□□ 1.4
SYNGR3-204ENST00000564642 DBF4Q9UBU7 674 aaPredicted RBP23.78■■□□□ 1.4
SYNGR3-204ENST00000564642 ELL2O00472 640 aaPredicted RBP23.77■■□□□ 1.4
SYNGR3-204ENST00000564642 GPTP24298 496 aa23.77■■□□□ 1.4
SYNGR3-204ENST00000564642 ZNF34Q8IZ26 560 aa23.76■■□□□ 1.39
SYNGR3-204ENST00000564642 SALL2Q9Y467 1007 aaPredicted RBP23.76■■□□□ 1.39
SYNGR3-204ENST00000564642 SRGNP10124 158 aa23.75■■□□□ 1.39
SYNGR3-204ENST00000564642 CNKSR1Q969H4 720 aa23.75■■□□□ 1.39
SYNGR3-204ENST00000564642 MASTLQ96GX5 879 aa23.75■■□□□ 1.39
SYNGR3-204ENST00000564642 COL11A2P13942 1736 aaPredicted RBP23.75■■□□□ 1.39
SYNGR3-204ENST00000564642 STYK1Q6J9G0 422 aa23.74■■□□□ 1.39
SYNGR3-204ENST00000564642 PPP1R42Q7Z4L9 355 aa23.74■■□□□ 1.39
SYNGR3-204ENST00000564642 CHMP4AQ9BY43 222 aa23.74■■□□□ 1.39
SYNGR3-204ENST00000564642 HYPKQ9NX55 129 aa23.74■■□□□ 1.39
SYNGR3-204ENST00000564642 PARP10Q53GL7 1025 aa23.73■■□□□ 1.39
SYNGR3-204ENST00000564642 HSP90AB3PQ58FF7 597 aa23.73■■□□□ 1.39
SYNGR3-204ENST00000564642 SUSD4Q5VX71 490 aa23.73■■□□□ 1.39
SYNGR3-204ENST00000564642 NUTM1Q86Y26 1132 aa23.73■■□□□ 1.39
SYNGR3-204ENST00000564642 C8orf58Q8NAV2 365 aa23.73■■□□□ 1.39
SYNGR3-204ENST00000564642 UBN2Q6ZU65 1347 aa23.73■■□□□ 1.39
SYNGR3-204ENST00000564642 TSR2Q969E8 191 aaKnown RBP23.72■■□□□ 1.39
SYNGR3-204ENST00000564642 IL16Q14005 1332 aa23.72■■□□□ 1.39
SYNGR3-204ENST00000564642 CACNA1SQ13698 1873 aa23.72■■□□□ 1.39
SYNGR3-204ENST00000564642 ADCY9O60503 1353 aa23.71■■□□□ 1.39
SYNGR3-204ENST00000564642 ERFEQ4G0M1 354 aa23.71■■□□□ 1.39
SYNGR3-204ENST00000564642 IBTKQ9P2D0 1353 aaPredicted RBP23.7■■□□□ 1.38
SYNGR3-204ENST00000564642 KLRG2A4D1S0 409 aaPredicted RBP23.7■■□□□ 1.38
SYNGR3-204ENST00000564642 NPR1P16066 1061 aa23.7■■□□□ 1.38
SYNGR3-204ENST00000564642 TCIRG1Q13488 830 aa23.7■■□□□ 1.38
SYNGR3-204ENST00000564642 C9orf131Q5VYM1 1079 aa23.7■■□□□ 1.38
SYNGR3-204ENST00000564642 ANKRD13DQ6ZTN6 518 aa23.7■■□□□ 1.38
SYNGR3-204ENST00000564642 WDR63Q8IWG1 891 aa23.7■■□□□ 1.38
SYNGR3-204ENST00000564642 PLBD2Q8NHP8 589 aa23.7■■□□□ 1.38
SYNGR3-204ENST00000564642 ZNF219Q9P2Y4 722 aaPredicted RBP23.7■■□□□ 1.38
SYNGR3-204ENST00000564642 ANKRD36CQ5JPF3 1778 aa23.7■■□□□ 1.38
SYNGR3-204ENST00000564642 SBF1O95248 1867 aa23.69■■□□□ 1.38
SYNGR3-204ENST00000564642 C21orf2O43822 256 aa23.69■■□□□ 1.38
SYNGR3-204ENST00000564642 CCDC30Q5VVM6 783 aa23.69■■□□□ 1.38
SYNGR3-204ENST00000564642 ZNF526Q8TF50 670 aaPredicted RBP23.69■■□□□ 1.38
SYNGR3-204ENST00000564642 UTP14AQ9BVJ6 771 aaKnown RBP23.69■■□□□ 1.38
SYNGR3-204ENST00000564642 NTSR2O95665 410 aa23.68■■□□□ 1.38
SYNGR3-204ENST00000564642 PRPF40BQ6NWY9 871 aaKnown RBP23.68■■□□□ 1.38
SYNGR3-204ENST00000564642 TSPYL6Q8N831 410 aa23.68■■□□□ 1.38
SYNGR3-204ENST00000564642 GPBP1L1Q9HC44 474 aaPredicted RBP23.68■■□□□ 1.38
SYNGR3-204ENST00000564642 SLX4Q8IY92 1834 aa23.68■■□□□ 1.38
SYNGR3-204ENST00000564642 RNF181Q9P0P0 153 aa23.67■■□□□ 1.38
SYNGR3-204ENST00000564642 ARFGEF2Q9Y6D5 1785 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms