RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 COL13A1Q5TAT6 717 aaPredicted RBP9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 SKAP1Q86WV1 359 aa9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 DNAJC10Q8IXB1 793 aa9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 DNAJC5GQ8N7S2 189 aa9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 SLC4A9Q96Q91 983 aa9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 TSPYL4Q9UJ04 414 aa9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 KDM3BQ7LBC6 1761 aa9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 PHF14O94880 888 aa9.35□□□□□ -0.91
MAP1LC3B-205ENST00000564638 COL5A3P25940 1745 aaPredicted RBP9.35□□□□□ -0.91
MAP1LC3B-205ENST00000564638 HDAC1Q13547 482 aaPredicted RBP9.35□□□□□ -0.91
MAP1LC3B-205ENST00000564638 AKT1S1Q96B36 256 aa9.35□□□□□ -0.91
MAP1LC3B-205ENST00000564638 ZNF496Q96IT1 587 aaPredicted RBP9.35□□□□□ -0.91
MAP1LC3B-205ENST00000564638 FMNL2Q96PY5 1086 aa9.35□□□□□ -0.91
MAP1LC3B-205ENST00000564638 MYH14Q7Z406 1995 aaKnown RBP9.35□□□□□ -0.91
MAP1LC3B-205ENST00000564638 ZNF831Q5JPB2 1677 aa9.35□□□□□ -0.91
MAP1LC3B-205ENST00000564638 SOS1Q07889 1333 aaPredicted RBP9.34□□□□□ -0.91
MAP1LC3B-205ENST00000564638 UBR3Q6ZT12 1888 aa9.34□□□□□ -0.91
MAP1LC3B-205ENST00000564638 GNPATO15228 680 aa9.34□□□□□ -0.91
MAP1LC3B-205ENST00000564638 HMGB2P26583 209 aaKnown RBP9.34□□□□□ -0.91
MAP1LC3B-205ENST00000564638 SMIM5Q71RC9 77 aa9.34□□□□□ -0.91
MAP1LC3B-205ENST00000564638 BABAM1Q9NWV8 329 aa9.34□□□□□ -0.91
MAP1LC3B-205ENST00000564638 PDZRN3Q9UPQ7 1066 aa9.34□□□□□ -0.91
MAP1LC3B-205ENST00000564638 HEG1Q9ULI3 1381 aa9.34□□□□□ -0.91
MAP1LC3B-205ENST00000564638 QSER1Q2KHR3 1735 aa9.34□□□□□ -0.92
MAP1LC3B-205ENST00000564638 PTPRCP08575 1304 aa9.33□□□□□ -0.92
MAP1LC3B-205ENST00000564638 CRKLP46109 303 aaKnown RBP9.33□□□□□ -0.92
MAP1LC3B-205ENST00000564638 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
MAP1LC3B-205ENST00000564638 ZBTB40Q9NUA8 1239 aa9.33□□□□□ -0.92
MAP1LC3B-205ENST00000564638 PNPLA7Q6ZV29 1317 aa9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 CICQ96RK0 1608 aaPredicted RBP9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 PRAMEF22A3QJZ6 481 aa9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 YBX3P16989 372 aaKnown RBP eCLIP9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 C8orf34Q49A92 452 aa9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 VSIG10Q8N0Z9 540 aa9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 IPO9Q96P70 1041 aaKnown RBP9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 ARXQ96QS3 562 aa9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 MTFR1LQ9H019 292 aa9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 CCDC87Q9NVE4 849 aa9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 RTCBQ9Y3I0 505 aaKnown RBP9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 ZNF330Q9Y3S2 320 aaPredicted RBP9.32□□□□□ -0.92
MAP1LC3B-205ENST00000564638 CNTNAP4Q9C0A0 1308 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 ATP10DQ9P241 1426 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 CAPN15O75808 1086 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 STARD3NLO95772 234 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 SNRPA1P09661 255 aaKnown RBP9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 CYP19A1P11511 503 aaPredicted RBP9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 EIF4A1P60842 406 aaKnown RBP9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 KRT24Q2M2I5 525 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 RC3H1Q5TC82 1133 aaKnown RBP9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 AMIGO3Q86WK7 504 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 COL23A1Q86Y22 540 aaPredicted RBP9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 SMC5Q8IY18 1101 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 DDRGK1Q96HY6 314 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 STK31Q9BXU1 1019 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 TEX13AQ9BXU3 409 aaPredicted RBP9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 ZBTB1Q9Y2K1 713 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 NOP58Q9Y2X3 529 aaKnown RBP9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 LAMB4A4D0S4 1761 aa9.31□□□□□ -0.92
MAP1LC3B-205ENST00000564638 PXDNLA1KZ92 1463 aa9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 RPS6KA4O75676 772 aa9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 A1BGP04217 495 aa9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 SSFA2P28290 1259 aa9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 PIP4K2AP48426 406 aaPredicted RBP9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 GPR162Q16538 588 aa9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 MSL1Q68DK7 614 aa9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 FLAD1Q8NFF5 587 aa9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 NLGN2Q8NFZ4 835 aa9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 USP16Q9Y5T5 823 aa9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 COL24A1Q17RW2 1714 aa9.3□□□□□ -0.92
MAP1LC3B-205ENST00000564638 ADCY9O60503 1353 aa9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 C4AP0C0L4 1744 aa9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 ZBTB7BO15156 539 aaPredicted RBP9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 EIF2S2P20042 333 aaKnown RBP9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 PRELPP51888 382 aa9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 TRAPPC3LQ5T215 181 aa9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 CCDC30Q5VVM6 783 aa9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 INTS3Q68E01 1043 aaKnown RBP9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 INTS5Q6P9B9 1019 aaKnown RBP9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 NECTIN2Q92692 538 aa9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 GCC1Q96CN9 775 aa9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 ANP32EQ9BTT0 268 aa9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 CHMP4AQ9BY43 222 aa9.29□□□□□ -0.92
MAP1LC3B-205ENST00000564638 COL15A1P39059 1388 aa9.28□□□□□ -0.92
MAP1LC3B-205ENST00000564638 RFC4P35249 363 aa9.28□□□□□ -0.92
MAP1LC3B-205ENST00000564638 ARHGEF1Q92888 912 aaKnown RBP9.28□□□□□ -0.92
MAP1LC3B-205ENST00000564638 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
MAP1LC3B-205ENST00000564638 HOXB7P09629 217 aa9.27□□□□□ -0.93
MAP1LC3B-205ENST00000564638 CCT4P50991 539 aaKnown RBP9.27□□□□□ -0.93
MAP1LC3B-205ENST00000564638 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
MAP1LC3B-205ENST00000564638 C1orf115Q9H7X2 142 aa9.27□□□□□ -0.93
MAP1LC3B-205ENST00000564638 SRP68Q9UHB9 627 aaKnown RBP9.27□□□□□ -0.93
MAP1LC3B-205ENST00000564638 KIF3CO14782 793 aa9.26□□□□□ -0.93
MAP1LC3B-205ENST00000564638 ZPR1O75312 459 aa9.26□□□□□ -0.93
MAP1LC3B-205ENST00000564638 MYL6BP14649 208 aa9.26□□□□□ -0.93
MAP1LC3B-205ENST00000564638 POLD1P28340 1107 aa9.26□□□□□ -0.93
MAP1LC3B-205ENST00000564638 NUCB1Q02818 461 aa9.26□□□□□ -0.93
MAP1LC3B-205ENST00000564638 KLHL34Q8N239 644 aa9.26□□□□□ -0.93
MAP1LC3B-205ENST00000564638 UPF2Q9HAU5 1272 aaKnown RBP9.26□□□□□ -0.93
MAP1LC3B-205ENST00000564638 A0A087WZG4 1122 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms