RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 CAGE1Q8TC20 777 aa14.75□□□□□ -0.05
COMMD4-209ENST00000564068 TSPOAP1O95153 1857 aa14.75□□□□□ -0.05
COMMD4-209ENST00000564068 LRRC2Q9BYS8 371 aa14.75□□□□□ -0.05
COMMD4-209ENST00000564068 STX1AQ16623 288 aa14.75□□□□□ -0.05
COMMD4-209ENST00000564068 PLCD3Q8N3E9 789 aa14.75□□□□□ -0.05
COMMD4-209ENST00000564068 DNAI1Q9UI46 699 aa14.75□□□□□ -0.05
COMMD4-209ENST00000564068 NUTM2BA6NNL0 878 aaPredicted RBP14.74□□□□□ -0.05
COMMD4-209ENST00000564068 NUTM2EB1AL46 878 aaPredicted RBP14.74□□□□□ -0.05
COMMD4-209ENST00000564068 NUTM2AQ8IVF1 878 aaPredicted RBP14.74□□□□□ -0.05
COMMD4-209ENST00000564068 GNAT3A8MTJ3 354 aa14.74□□□□□ -0.05
COMMD4-209ENST00000564068 VGLL3A8MV65 326 aa14.74□□□□□ -0.05
COMMD4-209ENST00000564068 MYL6BP14649 208 aa14.74□□□□□ -0.05
COMMD4-209ENST00000564068 JMYQ8N9B5 988 aa14.74□□□□□ -0.05
COMMD4-209ENST00000564068 BCORL1Q5H9F3 1711 aa14.74□□□□□ -0.05
COMMD4-209ENST00000564068 GCC2Q8IWJ2 1684 aa14.74□□□□□ -0.05
COMMD4-209ENST00000564068 PPFIBP1Q86W92 1011 aa14.74□□□□□ -0.05
COMMD4-209ENST00000564068 ZMYM3Q14202 1370 aa14.74□□□□□ -0.05
COMMD4-209ENST00000564068 SLU7O95391 586 aaKnown RBP14.74□□□□□ -0.05
COMMD4-209ENST00000564068 JARID2Q92833 1246 aaPredicted RBP14.74□□□□□ -0.05
COMMD4-209ENST00000564068 ERCC4Q92889 916 aaPredicted RBP14.74□□□□□ -0.05
COMMD4-209ENST00000564068 GTF3C6Q969F1 213 aa14.74□□□□□ -0.05
COMMD4-209ENST00000564068 PALD1Q9ULE6 856 aa14.74□□□□□ -0.05
COMMD4-209ENST00000564068 CBFA2T2O43439 604 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 ERLIN1O75477 346 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 LMAN1P49257 510 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 GSDMDP57764 484 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 ATP8B2P98198 1209 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 HSP90AB2PQ58FF8 381 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 CCDC171Q6TFL3 1326 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 CTAGE5O15320 804 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 FAM193AP78312 1265 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 G2E3Q7L622 706 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 PHF23Q9BUL5 403 aaPredicted RBP14.73□□□□□ -0.05
COMMD4-209ENST00000564068 CCDC69A6NI79 296 aa14.73□□□□□ -0.05
COMMD4-209ENST00000564068 TOP1P11387 765 aaKnown RBP14.73□□□□□ -0.05
COMMD4-209ENST00000564068 ZNF530Q6P9A1 599 aaPredicted RBP14.73□□□□□ -0.05
COMMD4-209ENST00000564068 RBM8AQ9Y5S9 174 aaKnown RBP14.73□□□□□ -0.05
COMMD4-209ENST00000564068 PI4KAP2A4QPH2 592 aa14.72□□□□□ -0.05
COMMD4-209ENST00000564068 PATL2C9JE40 543 aaKnown RBP14.72□□□□□ -0.05
COMMD4-209ENST00000564068 EIF3JO75822 258 aaKnown RBP14.72□□□□□ -0.05
COMMD4-209ENST00000564068 DHX8Q14562 1220 aaKnown RBP14.72□□□□□ -0.05
COMMD4-209ENST00000564068 PI4KAP1Q8N8J0 262 aa14.72□□□□□ -0.05
COMMD4-209ENST00000564068 ZNF397Q8NF99 534 aaPredicted RBP14.72□□□□□ -0.05
COMMD4-209ENST00000564068 POLR3DP05423 398 aaPredicted RBP14.72□□□□□ -0.05
COMMD4-209ENST00000564068 LRMPQ12912 555 aa14.72□□□□□ -0.05
COMMD4-209ENST00000564068 FILIP1LQ4L180 1135 aa14.72□□□□□ -0.05
COMMD4-209ENST00000564068 DNAAF4Q8WXU2 420 aa14.72□□□□□ -0.05
COMMD4-209ENST00000564068 NAP1L1P55209 391 aaKnown RBP14.72□□□□□ -0.05
COMMD4-209ENST00000564068 HSP90AA4PQ58FG1 418 aa14.72□□□□□ -0.05
COMMD4-209ENST00000564068 FKBP4Q02790 459 aaKnown RBP eCLIP14.71□□□□□ -0.05
COMMD4-209ENST00000564068 AOPEPQ8N6M6 819 aa14.71□□□□□ -0.05
COMMD4-209ENST00000564068 MBD5Q9P267 1494 aa14.71□□□□□ -0.05
COMMD4-209ENST00000564068 SLC3A2P08195 630 aaKnown RBP14.71□□□□□ -0.05
COMMD4-209ENST00000564068 USHBP1Q8N6Y0 703 aa14.71□□□□□ -0.05
COMMD4-209ENST00000564068 BRF1Q92994 677 aa14.71□□□□□ -0.05
COMMD4-209ENST00000564068 NPHP3Q7Z494 1330 aa14.71□□□□□ -0.05
COMMD4-209ENST00000564068 ZSCAN12O43309 604 aa14.71□□□□□ -0.06
COMMD4-209ENST00000564068 GNG11P61952 73 aa14.71□□□□□ -0.06
COMMD4-209ENST00000564068 ARHGAP29Q52LW3 1261 aa14.71□□□□□ -0.06
COMMD4-209ENST00000564068 CPLX3Q8WVH0 158 aa14.71□□□□□ -0.06
COMMD4-209ENST00000564068 EVI5LQ96CN4 794 aa14.71□□□□□ -0.06
COMMD4-209ENST00000564068 SYT10Q6XYQ8 523 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 SYTL4Q96C24 671 aaPredicted RBP14.7□□□□□ -0.06
COMMD4-209ENST00000564068 A0A1W2PP64 1363 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 WASLO00401 505 aaPredicted RBP14.7□□□□□ -0.06
COMMD4-209ENST00000564068 CAVIN2O95810 425 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 EVA1CP58658 441 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 RRP12Q5JTH9 1297 aaKnown RBP14.7□□□□□ -0.06
COMMD4-209ENST00000564068 PYCARDQ9ULZ3 195 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 ABCC10Q5T3U5 1492 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 TNRQ92752 1358 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 BTBD11A6QL63 1104 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 FOXO3O43524 673 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 CASQ1P31415 396 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 KIF4BQ2VIQ3 1234 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 USP16Q9Y5T5 823 aa14.7□□□□□ -0.06
COMMD4-209ENST00000564068 MSH6P52701 1360 aa14.69□□□□□ -0.06
COMMD4-209ENST00000564068 NLRP2Q9NX02 1062 aa14.69□□□□□ -0.06
COMMD4-209ENST00000564068 UBAP1LF5GYI3 381 aa14.69□□□□□ -0.06
COMMD4-209ENST00000564068 RAB11FIP4Q86YS3 637 aa14.69□□□□□ -0.06
COMMD4-209ENST00000564068 SMARCE1Q969G3 411 aa14.69□□□□□ -0.06
COMMD4-209ENST00000564068 TSPYL1Q9H0U9 437 aa14.69□□□□□ -0.06
COMMD4-209ENST00000564068 ELF2Q15723 593 aa14.69□□□□□ -0.06
COMMD4-209ENST00000564068 JAKMIP3Q5VZ66 844 aa14.69□□□□□ -0.06
COMMD4-209ENST00000564068 C8orf76Q96K31 380 aa14.69□□□□□ -0.06
COMMD4-209ENST00000564068 CBX8Q9HC52 389 aa14.69□□□□□ -0.06
COMMD4-209ENST00000564068 ERICH2A1L162 156 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 LMOD1P29536 600 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-209ENST00000564068 KLHL10Q6JEL2 608 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 NCKAP5LQ9HCH0 1330 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 DMTNQ08495 405 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 NEK1Q96PY6 1258 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 PPIP5K1Q6PFW1 1433 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 SIRT2Q8IXJ6 389 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 DEF6Q9H4E7 631 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 RIMBP3CA6NJZ7 1639 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 RIMBP3BA6NNM3 1639 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 RIMBP3Q9UFD9 1639 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 MCM6Q14566 821 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 PLEKHO1Q53GL0 409 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms