RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 PDZRN3Q9UPQ7 1066 aa9.63□□□□□ -0.87
HERPUD1-208ENST00000563911 DENND4BO75064 1496 aaPredicted RBP9.62□□□□□ -0.87
HERPUD1-208ENST00000563911 SERPINB4P48594 390 aa9.62□□□□□ -0.87
HERPUD1-208ENST00000563911 TBCELQ5QJ74 424 aa9.62□□□□□ -0.87
HERPUD1-208ENST00000563911 PURBQ96QR8 312 aaKnown RBP9.62□□□□□ -0.87
HERPUD1-208ENST00000563911 SCHIP1Q9P0W5 487 aaPredicted RBP9.62□□□□□ -0.87
HERPUD1-208ENST00000563911 PPP1R12BO60237 982 aaPredicted RBP9.61□□□□□ -0.87
HERPUD1-208ENST00000563911 RGS20O76081 388 aa9.61□□□□□ -0.87
HERPUD1-208ENST00000563911 CENPCQ03188 943 aa9.61□□□□□ -0.87
HERPUD1-208ENST00000563911 SLC9A9Q8IVB4 645 aa9.61□□□□□ -0.87
HERPUD1-208ENST00000563911 VTI1AQ96AJ9 217 aa9.61□□□□□ -0.87
HERPUD1-208ENST00000563911 SAMD9Q5K651 1589 aa9.61□□□□□ -0.87
HERPUD1-208ENST00000563911 STRCQ7RTU9 1775 aa9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 RAPGEF6Q8TEU7 1601 aa9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 CDK2AP1O14519 115 aa9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 CAPN5O15484 640 aaPredicted RBP9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 FOXO3O43524 673 aa9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 C21orf2O43822 256 aa9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 ABL1P00519 1130 aa9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 FOXK2Q01167 660 aa9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 MTFR1Q15390 333 aa9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 SND1Q7KZF4 910 aaKnown RBP eCLIP9.6□□□□□ -0.874e-8■■■■□ 19.7
HERPUD1-208ENST00000563911 HRH3Q9Y5N1 445 aa9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.6□□□□□ -0.87
HERPUD1-208ENST00000563911 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
HERPUD1-208ENST00000563911 RANGAP1P46060 587 aaPredicted RBP9.59□□□□□ -0.87
HERPUD1-208ENST00000563911 CAPN12Q6ZSI9 719 aa9.59□□□□□ -0.87
HERPUD1-208ENST00000563911 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
HERPUD1-208ENST00000563911 TSEN34Q9BSV6 310 aaKnown RBP9.59□□□□□ -0.87
HERPUD1-208ENST00000563911 SEPT3Q9UH03 358 aa9.59□□□□□ -0.87
HERPUD1-208ENST00000563911 FANCAO15360 1455 aa9.59□□□□□ -0.87
HERPUD1-208ENST00000563911 ZMYM4Q5VZL5 1548 aa9.58□□□□□ -0.88
HERPUD1-208ENST00000563911 HECW1Q76N89 1606 aa9.58□□□□□ -0.88
HERPUD1-208ENST00000563911 UPP2O95045 317 aa9.58□□□□□ -0.88
HERPUD1-208ENST00000563911 MFAP1P55081 439 aaKnown RBP9.58□□□□□ -0.88
HERPUD1-208ENST00000563911 NAA30Q147X3 362 aaPredicted RBP9.58□□□□□ -0.88
HERPUD1-208ENST00000563911 CHMP3Q9Y3E7 222 aa9.58□□□□□ -0.88
HERPUD1-208ENST00000563911 TTC37Q6PGP7 1564 aa9.58□□□□□ -0.88
HERPUD1-208ENST00000563911 ARHGEF12Q9NZN5 1544 aa9.57□□□□□ -0.88
HERPUD1-208ENST00000563911 FAM187AA6NFU0 413 aa9.57□□□□□ -0.88
HERPUD1-208ENST00000563911 GTF2E1P29083 439 aaPredicted RBP9.57□□□□□ -0.88
HERPUD1-208ENST00000563911 GTF3C2Q8WUA4 911 aaPredicted RBP9.57□□□□□ -0.88
HERPUD1-208ENST00000563911 ZSCAN10Q96SZ4 725 aaPredicted RBP9.57□□□□□ -0.88
HERPUD1-208ENST00000563911 ANO2Q9NQ90 1003 aa9.57□□□□□ -0.88
HERPUD1-208ENST00000563911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.57□□□□□ -0.886e-6■■■■■ 48.1
HERPUD1-208ENST00000563911 ZFYVE16Q7Z3T8 1539 aa9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 SOWAHDA6NJG2 315 aa9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 PSMA6P60900 246 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 SLC27A3Q5K4L6 730 aa9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 TMEM214Q6NUQ4 689 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 NBPF15Q8N660 670 aa9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 COL26A1Q96A83 441 aa9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 FHDC1Q9C0D6 1143 aaPredicted RBP9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 CABP1Q9NZU7 370 aa9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 USP3Q9Y6I4 520 aa9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 SCAPERQ9BY12 1400 aa9.56□□□□□ -0.88
HERPUD1-208ENST00000563911 PLEKHD1A6NEE1 506 aa9.55□□□□□ -0.88
HERPUD1-208ENST00000563911 ZNF211Q13398 564 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-208ENST00000563911 CCDC27Q2M243 656 aa9.55□□□□□ -0.88
HERPUD1-208ENST00000563911 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
HERPUD1-208ENST00000563911 INSM2Q96T92 566 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-208ENST00000563911 C2orf49Q9BVC5 232 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-208ENST00000563911 POLMQ9NP87 494 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-208ENST00000563911 BIN2Q9UBW5 565 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-208ENST00000563911 IQSEC3Q9UPP2 1182 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-208ENST00000563911 LTBP4Q8N2S1 1624 aa9.55□□□□□ -0.88
HERPUD1-208ENST00000563911 BMP2P12643 396 aa9.54□□□□□ -0.88
HERPUD1-208ENST00000563911 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
HERPUD1-208ENST00000563911 STAG2Q8N3U4 1231 aa9.54□□□□□ -0.88
HERPUD1-208ENST00000563911 EGFL7Q9UHF1 273 aa9.54□□□□□ -0.88
HERPUD1-208ENST00000563911 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
HERPUD1-208ENST00000563911 FER1L4A9Z1Z3 1794 aa9.54□□□□□ -0.88
HERPUD1-208ENST00000563911 POGZQ7Z3K3 1410 aa9.54□□□□□ -0.88
HERPUD1-208ENST00000563911 ATP10AO60312 1499 aa9.53□□□□□ -0.88
HERPUD1-208ENST00000563911 SERTM1A2A2V5 107 aa9.53□□□□□ -0.88
HERPUD1-208ENST00000563911 SPINT1O43278 529 aa9.53□□□□□ -0.88
HERPUD1-208ENST00000563911 C6orf118Q5T5N4 469 aa9.53□□□□□ -0.88
HERPUD1-208ENST00000563911 AFAP1Q8N556 730 aa9.53□□□□□ -0.88
HERPUD1-208ENST00000563911 DNMT3AQ9Y6K1 912 aaPredicted RBP9.53□□□□□ -0.88
HERPUD1-208ENST00000563911 MAGI2Q86UL8 1455 aa9.53□□□□□ -0.88
HERPUD1-208ENST00000563911 H3BRB1 525 aa9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 PLCH2O75038 1416 aa9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 GPC1P35052 558 aa9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 NOS2P35228 1153 aa9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 RNF144AP50876 292 aaPredicted RBP9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 TEAD4Q15561 434 aa9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 GNASQ5JWF2 1037 aa9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 SPATA31D1Q6ZQQ2 1576 aa9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 GLYCTKQ8IVS8 523 aa9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 NIFKQ9BYG3 293 aaKnown RBP9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 TUT1Q9H6E5 874 aaKnown RBP9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 PARP3Q9Y6F1 533 aa9.52□□□□□ -0.89
HERPUD1-208ENST00000563911 PREX1Q8TCU6 1659 aa9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 EFCAB5A4FU69 1503 aa9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 CDK13Q14004 1512 aaKnown RBP9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 ICMTO60725 284 aa9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 CTSOP43234 321 aaPredicted RBP9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 FKBP4Q02790 459 aaKnown RBP eCLIP9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 MTMR3Q13615 1198 aa9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 MRPL14Q6P1L8 145 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms