RNA–Protein interactions for RNA: ENST00000563753.1

NPTN-206, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-206ENST00000563753 MKRN1Q9UHC7 482 aaKnown RBP20.51■□□□□ 0.87
NPTN-206ENST00000563753 COL3A1P02461 1466 aaPredicted RBP20.5■□□□□ 0.87
NPTN-206ENST00000563753 NBPF5PQ86XG9 351 aaPredicted RBP20.5■□□□□ 0.87
NPTN-206ENST00000563753 PHACTR3Q96KR7 559 aa20.5■□□□□ 0.87
NPTN-206ENST00000563753 USP16Q9Y5T5 823 aa20.5■□□□□ 0.87
NPTN-206ENST00000563753 NPC1L1Q9UHC9 1359 aa20.49■□□□□ 0.87
NPTN-206ENST00000563753 PCNTO95613 3336 aa20.49■□□□□ 0.87
NPTN-206ENST00000563753 IQCA1LA6NCM1 817 aa20.49■□□□□ 0.87
NPTN-206ENST00000563753 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
NPTN-206ENST00000563753 PRKAR2BP31323 418 aa20.48■□□□□ 0.87
NPTN-206ENST00000563753 CLEC4GQ6UXB4 293 aa20.48■□□□□ 0.87
NPTN-206ENST00000563753 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
NPTN-206ENST00000563753 SCN7AQ01118 1682 aa20.48■□□□□ 0.87
NPTN-206ENST00000563753 ANKRD31Q8N7Z5 1873 aa20.47■□□□□ 0.87
NPTN-206ENST00000563753 CCDC93Q567U6 631 aa20.47■□□□□ 0.87
NPTN-206ENST00000563753 LDHDQ86WU2 507 aa20.47■□□□□ 0.87
NPTN-206ENST00000563753 C7orf43Q8WVR3 580 aa20.47■□□□□ 0.87
NPTN-206ENST00000563753 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
NPTN-206ENST00000563753 SNRPA1P09661 255 aaKnown RBP20.46■□□□□ 0.87
NPTN-206ENST00000563753 NPR1P16066 1061 aa20.46■□□□□ 0.87
NPTN-206ENST00000563753 L3MBTL3Q96JM7 780 aaPredicted RBP20.46■□□□□ 0.87
NPTN-206ENST00000563753 RSPH6AQ9H0K4 717 aa20.46■□□□□ 0.87
NPTN-206ENST00000563753 TAF1DQ9H5J8 278 aaPredicted RBP20.46■□□□□ 0.87
NPTN-206ENST00000563753 COL11A2P13942 1736 aaPredicted RBP20.45■□□□□ 0.86
NPTN-206ENST00000563753 TPTE2Q6XPS3 522 aa20.45■□□□□ 0.86
NPTN-206ENST00000563753 CFAP53Q96M91 514 aa20.45■□□□□ 0.86
NPTN-206ENST00000563753 RTF1Q92541 710 aaKnown RBP20.44■□□□□ 0.86
NPTN-206ENST00000563753 VIRMAQ69YN4 1812 aaKnown RBP20.43■□□□□ 0.86
NPTN-206ENST00000563753 KLRG2A4D1S0 409 aaPredicted RBP20.43■□□□□ 0.86
NPTN-206ENST00000563753 FKBP4Q02790 459 aaKnown RBP eCLIP20.43■□□□□ 0.86
NPTN-206ENST00000563753 ZNF277Q9NRM2 450 aaPredicted RBP20.43■□□□□ 0.86
NPTN-206ENST00000563753 NIP7Q9Y221 180 aaKnown RBP eCLIP20.43■□□□□ 0.86
NPTN-206ENST00000563753 NUDCQ9Y266 331 aa20.43■□□□□ 0.86
NPTN-206ENST00000563753 PASKQ96RG2 1323 aa20.43■□□□□ 0.86
NPTN-206ENST00000563753 CNTNAP1P78357 1384 aa20.43■□□□□ 0.86
NPTN-206ENST00000563753 FER1L6Q2WGJ9 1857 aa20.43■□□□□ 0.86
NPTN-206ENST00000563753 CCDC88AQ3V6T2 1871 aa20.43■□□□□ 0.86
NPTN-206ENST00000563753 MCM10Q7L590 875 aa20.42■□□□□ 0.86
NPTN-206ENST00000563753 RTKN2Q8IZC4 609 aa20.42■□□□□ 0.86
NPTN-206ENST00000563753 SLX4Q8IY92 1834 aa20.41■□□□□ 0.86
NPTN-206ENST00000563753 NBPF26B4DH59 902 aa20.41■□□□□ 0.86
NPTN-206ENST00000563753 RGL2O15211 777 aa20.41■□□□□ 0.86
NPTN-206ENST00000563753 EAPPQ56P03 285 aaPredicted RBP20.41■□□□□ 0.86
NPTN-206ENST00000563753 NBPF10Q6P3W6 841 aaKnown RBP20.41■□□□□ 0.86
NPTN-206ENST00000563753 NBPF15Q8N660 670 aa20.41■□□□□ 0.86
NPTN-206ENST00000563753 ZNF541Q9H0D2 1346 aa20.41■□□□□ 0.86
NPTN-206ENST00000563753 TMEM88BA6NKF7 163 aa20.4■□□□□ 0.86
NPTN-206ENST00000563753 FAM177BA6PVY3 158 aa20.4■□□□□ 0.86
NPTN-206ENST00000563753 FOXN1O15353 648 aa20.4■□□□□ 0.86
NPTN-206ENST00000563753 ITGBL1O95965 494 aaPredicted RBP20.4■□□□□ 0.86
NPTN-206ENST00000563753 U2AF1L5P0DN76 240 aaPredicted RBP20.4■□□□□ 0.86
NPTN-206ENST00000563753 U2AF1Q01081 240 aaKnown RBP eCLIP20.4■□□□□ 0.86
NPTN-206ENST00000563753 OLFM4Q6UX06 510 aa20.4■□□□□ 0.86
NPTN-206ENST00000563753 HACL1Q9UJ83 578 aa20.4■□□□□ 0.86
NPTN-206ENST00000563753 CLEC11AQ9Y240 323 aa20.4■□□□□ 0.86
NPTN-206ENST00000563753 SIPA1L3O60292 1781 aaPredicted RBP20.39■□□□□ 0.86
NPTN-206ENST00000563753 GTF2E1P29083 439 aaPredicted RBP20.39■□□□□ 0.85
NPTN-206ENST00000563753 DICER1Q9UPY3 1922 aaKnown RBP20.38■□□□□ 0.85
NPTN-206ENST00000563753 ALDH1B1P30837 517 aa20.38■□□□□ 0.85
NPTN-206ENST00000563753 EPHX2P34913 555 aa20.38■□□□□ 0.85
NPTN-206ENST00000563753 DCTN1Q14203 1278 aa20.38■□□□□ 0.85
NPTN-206ENST00000563753 AIDAQ96BJ3 306 aa20.38■□□□□ 0.85
NPTN-206ENST00000563753 IARSP41252 1262 aaKnown RBP20.37■□□□□ 0.85
NPTN-206ENST00000563753 VEGFBP49765 207 aa20.37■□□□□ 0.85
NPTN-206ENST00000563753 HLFQ16534 295 aa20.37■□□□□ 0.85
NPTN-206ENST00000563753 SYNE4Q8N205 404 aa20.37■□□□□ 0.85
NPTN-206ENST00000563753 PRDM10Q9NQV6 1147 aa20.37■□□□□ 0.85
NPTN-206ENST00000563753 FZD9O00144 591 aa20.36■□□□□ 0.85
NPTN-206ENST00000563753 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
NPTN-206ENST00000563753 CTCFP49711 727 aaPredicted RBP20.36■□□□□ 0.85
NPTN-206ENST00000563753 PNMA8AQ86V59 439 aaPredicted RBP20.36■□□□□ 0.85
NPTN-206ENST00000563753 BCORQ6W2J9 1755 aa20.34■□□□□ 0.85
NPTN-206ENST00000563753 RNF123Q5XPI4 1314 aa20.34■□□□□ 0.85
NPTN-206ENST00000563753 TAF7Q15545 349 aaPredicted RBP20.34■□□□□ 0.85
NPTN-206ENST00000563753 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
NPTN-206ENST00000563753 JDP2Q8WYK2 163 aa20.34■□□□□ 0.85
NPTN-206ENST00000563753 MAP1SQ66K74 1059 aaPredicted RBP20.33■□□□□ 0.85
NPTN-206ENST00000563753 GPC2Q8N158 579 aa20.33■□□□□ 0.85
NPTN-206ENST00000563753 MIS18AQ9NYP9 233 aa20.33■□□□□ 0.85
NPTN-206ENST00000563753 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
NPTN-206ENST00000563753 CC2D2BQ6DHV5 1058 aa20.32■□□□□ 0.84
NPTN-206ENST00000563753 NGEFQ8N5V2 710 aa20.32■□□□□ 0.84
NPTN-206ENST00000563753 PSMD1Q99460 953 aa20.32■□□□□ 0.84
NPTN-206ENST00000563753 NYXQ9GZU5 481 aa20.32■□□□□ 0.84
NPTN-206ENST00000563753 WBP1LQ9NX94 342 aa20.32■□□□□ 0.84
NPTN-206ENST00000563753 ARFGEF2Q9Y6D5 1785 aa20.31■□□□□ 0.84
NPTN-206ENST00000563753 DEFB115Q30KQ5 88 aa20.31■□□□□ 0.84
NPTN-206ENST00000563753 CRY2Q49AN0 593 aa20.31■□□□□ 0.84
NPTN-206ENST00000563753 NUTM1Q86Y26 1132 aa20.31■□□□□ 0.84
NPTN-206ENST00000563753 SCN4AP35499 1836 aa20.3■□□□□ 0.84
NPTN-206ENST00000563753 RASSF10A6NK89 507 aa20.3■□□□□ 0.84
NPTN-206ENST00000563753 ERVV-1B6SEH8 477 aa20.3■□□□□ 0.84
NPTN-206ENST00000563753 EIF6P56537 245 aaKnown RBP20.3■□□□□ 0.84
NPTN-206ENST00000563753 GJA3Q9Y6H8 435 aa20.3■□□□□ 0.84
NPTN-206ENST00000563753 LBX1P52954 281 aa20.29■□□□□ 0.84
NPTN-206ENST00000563753 RPGRQ92834 1020 aaKnown RBP20.29■□□□□ 0.84
NPTN-206ENST00000563753 ABT1Q9ULW3 272 aaKnown RBP20.29■□□□□ 0.84
NPTN-206ENST00000563753 ABCC12Q96J65 1359 aa20.29■□□□□ 0.84
NPTN-206ENST00000563753 LMOD1P29536 600 aaPredicted RBP20.28■□□□□ 0.84
NPTN-206ENST00000563753 HOXA10P31260 410 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms