RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 NRXN2Q9P2S2 1712 aa11.1□□□□□ -0.63
UBR1-204ENST00000563239 KIF13BQ9NQT8 1826 aa11.1□□□□□ -0.63
UBR1-204ENST00000563239 ELL2O00472 640 aaPredicted RBP11.1□□□□□ -0.63
UBR1-204ENST00000563239 SLC34A2O95436 690 aa11.1□□□□□ -0.63
UBR1-204ENST00000563239 KLHL34Q8N239 644 aa11.1□□□□□ -0.63
UBR1-204ENST00000563239 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
UBR1-204ENST00000563239 FANCIQ9NVI1 1328 aa11.09□□□□□ -0.63
UBR1-204ENST00000563239 KIAA1551Q9HCM1 1747 aa11.09□□□□□ -0.63
UBR1-204ENST00000563239 CEP350Q5VT06 3117 aa11.09□□□□□ -0.63
UBR1-204ENST00000563239 RGL2O15211 777 aa11.09□□□□□ -0.63
UBR1-204ENST00000563239 HDGFL1Q5TGJ6 251 aa11.09□□□□□ -0.63
UBR1-204ENST00000563239 CLEC4GQ6UXB4 293 aa11.09□□□□□ -0.63
UBR1-204ENST00000563239 BICDL1Q6ZP65 573 aa11.09□□□□□ -0.63
UBR1-204ENST00000563239 DDX21Q9NR30 783 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBR1-204ENST00000563239 CHPF2Q9P2E5 772 aa11.09□□□□□ -0.63
UBR1-204ENST00000563239 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
UBR1-204ENST00000563239 UTRNP46939 3433 aa11.08□□□□□ -0.64
UBR1-204ENST00000563239 AFDNP55196 1824 aaKnown RBP11.08□□□□□ -0.64
UBR1-204ENST00000563239 ERVV-1B6SEH8 477 aa11.08□□□□□ -0.64
UBR1-204ENST00000563239 SERPINB2P05120 415 aa11.08□□□□□ -0.64
UBR1-204ENST00000563239 PXDNLA1KZ92 1463 aa11.07□□□□□ -0.64
UBR1-204ENST00000563239 CARMIL3Q8ND23 1372 aa11.07□□□□□ -0.64
UBR1-204ENST00000563239 KCNA3P22001 575 aa11.07□□□□□ -0.64
UBR1-204ENST00000563239 COPS6Q7L5N1 327 aa11.07□□□□□ -0.64
UBR1-204ENST00000563239 NPM2Q86SE8 214 aaKnown RBP11.07□□□□□ -0.64
UBR1-204ENST00000563239 XAGE3Q8WTP9 111 aa11.07□□□□□ -0.64
UBR1-204ENST00000563239 ZBTB3Q9H5J0 574 aa11.07□□□□□ -0.64
UBR1-204ENST00000563239 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
UBR1-204ENST00000563239 VAMP4O75379 141 aa11.06□□□□□ -0.64
UBR1-204ENST00000563239 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
UBR1-204ENST00000563239 KIF6Q6ZMV9 814 aa11.06□□□□□ -0.64
UBR1-204ENST00000563239 SETDB2Q96T68 719 aa11.06□□□□□ -0.64
UBR1-204ENST00000563239 ATP10DQ9P241 1426 aa11.06□□□□□ -0.64
UBR1-204ENST00000563239 A0A0G2JLW4 131 aa11.05□□□□□ -0.64
UBR1-204ENST00000563239 DPEP1P16444 411 aa11.05□□□□□ -0.64
UBR1-204ENST00000563239 YBX3P16989 372 aaKnown RBP eCLIP11.05□□□□□ -0.64
UBR1-204ENST00000563239 TGFB2P61812 414 aa11.05□□□□□ -0.64
UBR1-204ENST00000563239 GOLGA2Q08379 1002 aa11.05□□□□□ -0.64
UBR1-204ENST00000563239 AIMP1Q12904 312 aaKnown RBP11.05□□□□□ -0.64
UBR1-204ENST00000563239 TWISTNBQ3B726 338 aaPredicted RBP11.05□□□□□ -0.64
UBR1-204ENST00000563239 PRR5LQ6MZQ0 368 aa11.05□□□□□ -0.64
UBR1-204ENST00000563239 GIGYF2Q6Y7W6 1299 aaKnown RBP11.05□□□□□ -0.64
UBR1-204ENST00000563239 ZNF34Q8IZ26 560 aa11.05□□□□□ -0.64
UBR1-204ENST00000563239 CCDC24Q8N4L8 307 aa11.05□□□□□ -0.64
UBR1-204ENST00000563239 PHAXQ9H814 394 aaKnown RBP11.05□□□□□ -0.64
UBR1-204ENST00000563239 NIP7Q9Y221 180 aaKnown RBP eCLIP11.05□□□□□ -0.64
UBR1-204ENST00000563239 ZNF652Q9Y2D9 606 aa11.05□□□□□ -0.64
UBR1-204ENST00000563239 UBN2Q6ZU65 1347 aa11.05□□□□□ -0.64
UBR1-204ENST00000563239 NUP98P52948 1817 aa11.05□□□□□ -0.64
UBR1-204ENST00000563239 N4BP2Q86UW6 1770 aaPredicted RBP11.04□□□□□ -0.64
UBR1-204ENST00000563239 TCERG1O14776 1098 aaKnown RBP11.04□□□□□ -0.64
UBR1-204ENST00000563239 C1QTNF8P60827 252 aa11.04□□□□□ -0.64
UBR1-204ENST00000563239 SLFN5Q08AF3 891 aa11.04□□□□□ -0.64
UBR1-204ENST00000563239 TRMT2AQ8IZ69 625 aaKnown RBP11.04□□□□□ -0.64
UBR1-204ENST00000563239 CDCA7LQ96GN5 454 aa11.04□□□□□ -0.64
UBR1-204ENST00000563239 MYH16Q9H6N6 1097 aa11.04□□□□□ -0.64
UBR1-204ENST00000563239 HYPKQ9NX55 129 aa11.04□□□□□ -0.64
UBR1-204ENST00000563239 ANKRD31Q8N7Z5 1873 aa11.04□□□□□ -0.64
UBR1-204ENST00000563239 GPTP24298 496 aa11.03□□□□□ -0.64
UBR1-204ENST00000563239 CHRNA5P30532 468 aa11.03□□□□□ -0.64
UBR1-204ENST00000563239 CCDC30Q5VVM6 783 aa11.03□□□□□ -0.64
UBR1-204ENST00000563239 PLBD2Q8NHP8 589 aa11.03□□□□□ -0.64
UBR1-204ENST00000563239 E9PSI1 815 aa11.02□□□□□ -0.65
UBR1-204ENST00000563239 SUSD4Q5VX71 490 aa11.02□□□□□ -0.65
UBR1-204ENST00000563239 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.65
UBR1-204ENST00000563239 G2E3Q7L622 706 aa11.02□□□□□ -0.65
UBR1-204ENST00000563239 NBPF5PQ86XG9 351 aaPredicted RBP11.02□□□□□ -0.65
UBR1-204ENST00000563239 CNBD1Q8NA66 436 aa11.02□□□□□ -0.65
UBR1-204ENST00000563239 BRIP1Q9BX63 1249 aa11.02□□□□□ -0.65
UBR1-204ENST00000563239 RNF216Q9NWF9 866 aaPredicted RBP11.02□□□□□ -0.65
UBR1-204ENST00000563239 WWC3Q9ULE0 1092 aa11.02□□□□□ -0.65
UBR1-204ENST00000563239 BRCA1P38398 1863 aaKnown RBP11.02□□□□□ -0.65
UBR1-204ENST00000563239 FAM177BA6PVY3 158 aa11.01□□□□□ -0.65
UBR1-204ENST00000563239 NTSR2O95665 410 aa11.01□□□□□ -0.65
UBR1-204ENST00000563239 TCIRG1Q13488 830 aa11.01□□□□□ -0.65
UBR1-204ENST00000563239 GPR162Q16538 588 aa11.01□□□□□ -0.65
UBR1-204ENST00000563239 ISCA1Q9BUE6 129 aa11.01□□□□□ -0.65
UBR1-204ENST00000563239 ABCC12Q96J65 1359 aa11.01□□□□□ -0.65
UBR1-204ENST00000563239 IBTKQ9P2D0 1353 aaPredicted RBP11.01□□□□□ -0.65
UBR1-204ENST00000563239 KLRG2A4D1S0 409 aaPredicted RBP11□□□□□ -0.65
UBR1-204ENST00000563239 SLC4A2P04920 1241 aa11□□□□□ -0.65
UBR1-204ENST00000563239 ERFEQ4G0M1 354 aa11□□□□□ -0.65
UBR1-204ENST00000563239 TPTE2Q6XPS3 522 aa11□□□□□ -0.65
UBR1-204ENST00000563239 NLRP10Q86W26 655 aa11□□□□□ -0.65
UBR1-204ENST00000563239 NUTM1Q86Y26 1132 aa11□□□□□ -0.65
UBR1-204ENST00000563239 C2CD5Q86YS7 1000 aa11□□□□□ -0.65
UBR1-204ENST00000563239 CHMP4AQ9BY43 222 aa11□□□□□ -0.65
UBR1-204ENST00000563239 COL11A2P13942 1736 aaPredicted RBP11□□□□□ -0.65
UBR1-204ENST00000563239 ANKRD36CQ5JPF3 1778 aa11□□□□□ -0.65
UBR1-204ENST00000563239 TNRC6CQ9HCJ0 1690 aaKnown RBP10.99□□□□□ -0.65
UBR1-204ENST00000563239 DLEC1Q9Y238 1755 aa10.99□□□□□ -0.65
UBR1-204ENST00000563239 ARFGEF2Q9Y6D5 1785 aa10.99□□□□□ -0.65
UBR1-204ENST00000563239 ST5P78524 1137 aa10.99□□□□□ -0.65
UBR1-204ENST00000563239 PARP10Q53GL7 1025 aa10.99□□□□□ -0.65
UBR1-204ENST00000563239 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
UBR1-204ENST00000563239 PELP1Q8IZL8 1130 aaKnown RBP10.99□□□□□ -0.65
UBR1-204ENST00000563239 SYNE4Q8N205 404 aa10.99□□□□□ -0.65
UBR1-204ENST00000563239 PIM2Q9P1W9 311 aa10.99□□□□□ -0.65
UBR1-204ENST00000563239 ADCY9O60503 1353 aa10.99□□□□□ -0.65
UBR1-204ENST00000563239 ATP5J2-PTCD1G3V325 749 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms