RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 SLC26A8Q96RN1 970 aa11.82□□□□□ -0.52
GTF3C1-202ENST00000561623 GTPBP4Q9BZE4 634 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-202ENST00000561623 DNAI1Q9UI46 699 aa11.82□□□□□ -0.52
GTF3C1-202ENST00000561623 NECAB1Q8N987 351 aa11.82□□□□□ -0.52
GTF3C1-202ENST00000561623 DNAAF4Q8WXU2 420 aa11.82□□□□□ -0.52
GTF3C1-202ENST00000561623 PRG4Q92954 1404 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-202ENST00000561623 SEC24BO95487 1268 aa11.82□□□□□ -0.52
GTF3C1-202ENST00000561623 POLR3DP05423 398 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-202ENST00000561623 NUCB1Q02818 461 aa11.82□□□□□ -0.52
GTF3C1-202ENST00000561623 CEP126Q9P2H0 1117 aa11.82□□□□□ -0.52
GTF3C1-202ENST00000561623 POGZQ7Z3K3 1410 aa11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 SSR1P43307 286 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 HSP90AA4PQ58FG1 418 aa11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 CCDC150Q8NCX0 1101 aa11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 YEATS4O95619 227 aa11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 MCM6Q14566 821 aa11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 FKBP15Q5T1M5 1219 aa11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 CACNA2D4Q7Z3S7 1137 aa11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 GNL3LQ9NVN8 582 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 RAB11FIP4Q86YS3 637 aa11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 RAPGEF3O95398 923 aa11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 BMP2KQ9NSY1 1161 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.81□□□□□ -0.52
GTF3C1-202ENST00000561623 PAFAH1B1P43034 410 aa11.8□□□□□ -0.52
GTF3C1-202ENST00000561623 HLTFQ14527 1009 aaKnown RBP eCLIP11.8□□□□□ -0.52
GTF3C1-202ENST00000561623 AIDAQ96BJ3 306 aa11.8□□□□□ -0.52
GTF3C1-202ENST00000561623 CABP4P57796 275 aa11.8□□□□□ -0.52
GTF3C1-202ENST00000561623 MAATS1Q7Z4T9 603 aa11.8□□□□□ -0.52
GTF3C1-202ENST00000561623 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
GTF3C1-202ENST00000561623 ZPR1O75312 459 aa11.8□□□□□ -0.52
GTF3C1-202ENST00000561623 GOLGA8BA8MQT2 603 aa11.8□□□□□ -0.52
GTF3C1-202ENST00000561623 DNAJC25Q9H1X3 360 aa11.8□□□□□ -0.52
GTF3C1-202ENST00000561623 MAP3K1Q13233 1512 aa11.8□□□□□ -0.52
GTF3C1-202ENST00000561623 RTEL1-TNFRSF6BF6WH68 1400 aa11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 EZRP15311 586 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 SDSP20132 328 aa11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 PTGS1P23219 599 aa11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 RAB3GAP1Q15042 981 aa11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 TDRD12Q587J7 1177 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 ZNF622Q969S3 477 aaKnown RBP eCLIP11.79□□□□□ -0.521e-6■■■□□ 15.2
GTF3C1-202ENST00000561623 GNAT3A8MTJ3 354 aa11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 EP400NLQ6ZTU2 488 aa11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 JADE2Q9NQC1 790 aa11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 USO1O60763 962 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 SPECC1Q5M775 1068 aa11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 CCDC144CPQ8IYA2 1237 aa11.79□□□□□ -0.52
GTF3C1-202ENST00000561623 SUPT6HQ7KZ85 1726 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 TAF7Q15545 349 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 FAM200AQ8TCP9 573 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 ARFGAP3Q9NP61 516 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 TNNQ9UQP3 1299 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 MPHOSPH8Q99549 860 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 ZNF710Q8N1W2 664 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 GOLGA6L9A6NEM1 432 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 UBE4AQ14139 1066 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 SLU7O95391 586 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 USP5P45974 858 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 LRP2BPQ9P2M1 347 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 PRXQ9BXM0 1461 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 CCDC175P0C221 793 aa11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 ZNF526Q8TF50 670 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-202ENST00000561623 ABCC11Q96J66 1382 aa11.77□□□□□ -0.52
GTF3C1-202ENST00000561623 UBASH3AP57075 661 aa11.77□□□□□ -0.52
GTF3C1-202ENST00000561623 AOPEPQ8N6M6 819 aa11.77□□□□□ -0.52
GTF3C1-202ENST00000561623 SNX21Q969T3 373 aa11.77□□□□□ -0.52
GTF3C1-202ENST00000561623 DACT1Q9NYF0 836 aa11.77□□□□□ -0.52
GTF3C1-202ENST00000561623 HDAC1Q13547 482 aaPredicted RBP11.77□□□□□ -0.52
GTF3C1-202ENST00000561623 ZGPATQ8N5A5 531 aaKnown RBP11.77□□□□□ -0.52
GTF3C1-202ENST00000561623 TCEANC2Q96MN5 208 aa11.77□□□□□ -0.52
GTF3C1-202ENST00000561623 MICALL1Q8N3F8 863 aa11.77□□□□□ -0.53
GTF3C1-202ENST00000561623 IFIT1P09914 478 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-202ENST00000561623 DHX29Q7Z478 1369 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-202ENST00000561623 MINDY4BA8MYZ0 360 aa11.77□□□□□ -0.53
GTF3C1-202ENST00000561623 CAPN2P17655 700 aa11.77□□□□□ -0.53
GTF3C1-202ENST00000561623 ZNF408Q9H9D4 720 aa11.77□□□□□ -0.53
GTF3C1-202ENST00000561623 HMGB1P09429 215 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 SMAP1Q8IYB5 467 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 GTF3C6Q969F1 213 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 C10orf67Q8IYJ2 551 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 EFCAB5A4FU69 1503 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 SMC1AQ14683 1233 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 CCDC97Q96F63 343 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 DISP3Q9P2K9 1392 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 MYD88Q99836 296 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 EMILIN1Q9Y6C2 1016 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 ATAD2Q6PL18 1390 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 IVLP07476 585 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 SSRP1Q08945 709 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 VPS18Q9P253 973 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 GSTTP1A0A1W2PQM5 241 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 GOLGA8AA7E2F4 631 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 NF2P35240 595 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 ALS2CR12Q96Q35 445 aa11.76□□□□□ -0.53
GTF3C1-202ENST00000561623 MTIF2P46199 727 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 IRX3P78415 501 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-202ENST00000561623 EVI5LQ96CN4 794 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms