RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
SHF-211ENST00000561278 FAM177BA6PVY3 158 aa16.46■□□□□ 0.23
SHF-211ENST00000561278 EIF4A1P60842 406 aaKnown RBP16.46■□□□□ 0.23
SHF-211ENST00000561278 WDR43Q15061 677 aaKnown RBP eCLIP16.46■□□□□ 0.23
SHF-211ENST00000561278 CLEC4GQ6UXB4 293 aa16.46■□□□□ 0.23
SHF-211ENST00000561278 CCDC146Q8IYE0 955 aa16.46■□□□□ 0.23
SHF-211ENST00000561278 NMRK2Q9NPI5 230 aa16.46■□□□□ 0.23
SHF-211ENST00000561278 TSPYL4Q9UJ04 414 aa16.46■□□□□ 0.23
SHF-211ENST00000561278 PDZRN3Q9UPQ7 1066 aa16.46■□□□□ 0.23
SHF-211ENST00000561278 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
SHF-211ENST00000561278 NIP7Q9Y221 180 aaKnown RBP eCLIP16.45■□□□□ 0.22
SHF-211ENST00000561278 RRP7AQ9Y3A4 280 aaKnown RBP16.45■□□□□ 0.22
SHF-211ENST00000561278 KDM2BQ8NHM5 1336 aa16.45■□□□□ 0.22
SHF-211ENST00000561278 MYL6BP14649 208 aa16.44■□□□□ 0.22
SHF-211ENST00000561278 NEUROD2Q15784 382 aa16.44■□□□□ 0.22
SHF-211ENST00000561278 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
SHF-211ENST00000561278 C21orf2O43822 256 aa16.43■□□□□ 0.22
SHF-211ENST00000561278 LMNB1P20700 586 aa16.43■□□□□ 0.22
SHF-211ENST00000561278 KIF6Q6ZMV9 814 aa16.43■□□□□ 0.22
SHF-211ENST00000561278 GTF2E1P29083 439 aaPredicted RBP16.42■□□□□ 0.22
SHF-211ENST00000561278 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
SHF-211ENST00000561278 HLFQ16534 295 aa16.42■□□□□ 0.22
SHF-211ENST00000561278 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
SHF-211ENST00000561278 HSPA6P17066 643 aa16.41■□□□□ 0.22
SHF-211ENST00000561278 PRPF40BQ6NWY9 871 aaKnown RBP16.41■□□□□ 0.22
SHF-211ENST00000561278 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
SHF-211ENST00000561278 CNKSR1Q969H4 720 aa16.41■□□□□ 0.22
SHF-211ENST00000561278 MASTLQ96GX5 879 aa16.41■□□□□ 0.22
SHF-211ENST00000561278 CACNA1SQ13698 1873 aa16.41■□□□□ 0.22
SHF-211ENST00000561278 NFKBIEO00221 500 aa16.4■□□□□ 0.22
SHF-211ENST00000561278 TOMM70O94826 608 aa16.4■□□□□ 0.22
SHF-211ENST00000561278 SRGNP10124 158 aa16.4■□□□□ 0.22
SHF-211ENST00000561278 STYK1Q6J9G0 422 aa16.4■□□□□ 0.22
SHF-211ENST00000561278 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
SHF-211ENST00000561278 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
SHF-211ENST00000561278 SBF1O95248 1867 aa16.39■□□□□ 0.22
SHF-211ENST00000561278 RGL2O15211 777 aa16.39■□□□□ 0.21
SHF-211ENST00000561278 EIF2S2P20042 333 aaKnown RBP16.39■□□□□ 0.21
SHF-211ENST00000561278 TTLL7Q6ZT98 887 aa16.39■□□□□ 0.21
SHF-211ENST00000561278 RUNDC1Q96C34 613 aa16.39■□□□□ 0.21
SHF-211ENST00000561278 LAS1LQ9Y4W2 734 aaKnown RBP16.39■□□□□ 0.21
SHF-211ENST00000561278 MAP3K15Q6ZN16 1313 aa16.39■□□□□ 0.21
SHF-211ENST00000561278 ZC3H4Q9UPT8 1303 aaKnown RBP16.39■□□□□ 0.21
SHF-211ENST00000561278 PRELPP51888 382 aa16.38■□□□□ 0.21
SHF-211ENST00000561278 TAOK3Q9H2K8 898 aa16.38■□□□□ 0.21
SHF-211ENST00000561278 PRKRIP1Q9H875 184 aaPredicted RBP16.38■□□□□ 0.21
SHF-211ENST00000561278 RRAGCQ9HB90 399 aa16.38■□□□□ 0.21
SHF-211ENST00000561278 ARFGEF2Q9Y6D5 1785 aa16.37■□□□□ 0.21
SHF-211ENST00000561278 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
SHF-211ENST00000561278 NPR1P16066 1061 aa16.37■□□□□ 0.21
SHF-211ENST00000561278 GPTP24298 496 aa16.37■□□□□ 0.21
SHF-211ENST00000561278 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
SHF-211ENST00000561278 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
SHF-211ENST00000561278 NYXQ9GZU5 481 aa16.37■□□□□ 0.21
SHF-211ENST00000561278 ADAMTS8Q9UP79 889 aa16.37■□□□□ 0.21
SHF-211ENST00000561278 CEP350Q5VT06 3117 aa16.37■□□□□ 0.21
SHF-211ENST00000561278 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
SHF-211ENST00000561278 ERFEQ4G0M1 354 aa16.36■□□□□ 0.21
SHF-211ENST00000561278 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
SHF-211ENST00000561278 NUTM1Q86Y26 1132 aa16.36■□□□□ 0.21
SHF-211ENST00000561278 BABAM1Q9NWV8 329 aa16.36■□□□□ 0.21
SHF-211ENST00000561278 SLX4Q8IY92 1834 aa16.35■□□□□ 0.21
SHF-211ENST00000561278 GLTPD2A6NH11 291 aa16.35■□□□□ 0.21
SHF-211ENST00000561278 RBM46Q8TBY0 533 aaKnown RBP16.35■□□□□ 0.21
SHF-211ENST00000561278 ABCC12Q96J65 1359 aa16.35■□□□□ 0.21
SHF-211ENST00000561278 NUP98P52948 1817 aa16.34■□□□□ 0.21
SHF-211ENST00000561278 FER1L6Q2WGJ9 1857 aa16.34■□□□□ 0.21
SHF-211ENST00000561278 ANXA1P04083 346 aa16.34■□□□□ 0.21
SHF-211ENST00000561278 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
SHF-211ENST00000561278 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
SHF-211ENST00000561278 UBN2Q6ZU65 1347 aa16.34■□□□□ 0.21
SHF-211ENST00000561278 PROSER3Q2NL68 480 aa16.33■□□□□ 0.2
SHF-211ENST00000561278 DPY19L2Q6NUT2 758 aa16.33■□□□□ 0.2
SHF-211ENST00000561278 TRIM35Q9UPQ4 493 aa16.33■□□□□ 0.2
SHF-211ENST00000561278 LTBP3Q9NS15 1303 aa16.33■□□□□ 0.2
SHF-211ENST00000561278 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
SHF-211ENST00000561278 KLRG2A4D1S0 409 aaPredicted RBP16.32■□□□□ 0.2
SHF-211ENST00000561278 APLP1P51693 650 aa16.32■□□□□ 0.2
SHF-211ENST00000561278 AIMP1Q12904 312 aaKnown RBP16.32■□□□□ 0.2
SHF-211ENST00000561278 KRT24Q2M2I5 525 aa16.32■□□□□ 0.2
SHF-211ENST00000561278 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
SHF-211ENST00000561278 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
SHF-211ENST00000561278 IBTKQ9P2D0 1353 aaPredicted RBP16.31■□□□□ 0.2
SHF-211ENST00000561278 VEGFAP15692 232 aaPredicted RBP16.31■□□□□ 0.2
SHF-211ENST00000561278 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
SHF-211ENST00000561278 PDIA6Q15084 440 aa16.31■□□□□ 0.2
SHF-211ENST00000561278 SUSD4Q5VX71 490 aa16.31■□□□□ 0.2
SHF-211ENST00000561278 PPP1R42Q7Z4L9 355 aa16.31■□□□□ 0.2
SHF-211ENST00000561278 CHL1O00533 1208 aa16.3■□□□□ 0.2
SHF-211ENST00000561278 FSTL1Q12841 308 aa16.3■□□□□ 0.2
SHF-211ENST00000561278 OLFM4Q6UX06 510 aa16.3■□□□□ 0.2
SHF-211ENST00000561278 ZNF34Q8IZ26 560 aa16.3■□□□□ 0.2
SHF-211ENST00000561278 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
SHF-211ENST00000561278 NTSR2O95665 410 aa16.29■□□□□ 0.2
SHF-211ENST00000561278 FKBP4Q02790 459 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHF-211ENST00000561278 PARP10Q53GL7 1025 aa16.29■□□□□ 0.2
SHF-211ENST00000561278 HDGFL1Q5TGJ6 251 aa16.29■□□□□ 0.2
SHF-211ENST00000561278 COPS6Q7L5N1 327 aa16.29■□□□□ 0.2
SHF-211ENST00000561278 LRP10Q7Z4F1 713 aa16.29■□□□□ 0.2
SHF-211ENST00000561278 XAGE3Q8WTP9 111 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms