RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 SRCIN1Q9C0H9 1055 aa15.38■□□□□ 0.05
HERC1-205ENST00000559886 TNS1Q9HBL0 1735 aaKnown RBP15.38■□□□□ 0.05
HERC1-205ENST00000559886 METTL22Q9BUU2 404 aaPredicted RBP15.38■□□□□ 0.05
HERC1-205ENST00000559886 EIF5P55010 431 aaKnown RBP15.37■□□□□ 0.05
HERC1-205ENST00000559886 CNTNAP4Q9C0A0 1308 aa15.37■□□□□ 0.05
HERC1-205ENST00000559886 AFDNP55196 1824 aaKnown RBP15.37■□□□□ 0.05
HERC1-205ENST00000559886 RC3H1Q5TC82 1133 aaKnown RBP15.37■□□□□ 0.05
HERC1-205ENST00000559886 LINS1Q8NG48 757 aa15.37■□□□□ 0.05
HERC1-205ENST00000559886 ZNF330Q9Y3S2 320 aaPredicted RBP15.37■□□□□ 0.05
HERC1-205ENST00000559886 PCDHB15Q9Y5E8 787 aa15.37■□□□□ 0.05
HERC1-205ENST00000559886 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
HERC1-205ENST00000559886 MEIS3Q99687 375 aa15.36■□□□□ 0.05
HERC1-205ENST00000559886 IBTKQ9P2D0 1353 aaPredicted RBP15.36■□□□□ 0.05
HERC1-205ENST00000559886 SLC27A3Q5K4L6 730 aa15.36■□□□□ 0.05
HERC1-205ENST00000559886 C4BP0C0L5 1744 aa15.35■□□□□ 0.05
HERC1-205ENST00000559886 PLSCR1O15162 318 aa15.35■□□□□ 0.05
HERC1-205ENST00000559886 NEXNQ0ZGT2 675 aa15.35■□□□□ 0.05
HERC1-205ENST00000559886 KIF6Q6ZMV9 814 aa15.35■□□□□ 0.05
HERC1-205ENST00000559886 USP44Q9H0E7 712 aa15.35■□□□□ 0.05
HERC1-205ENST00000559886 NUP98P52948 1817 aa15.35■□□□□ 0.05
HERC1-205ENST00000559886 IGKV5-2P06315 115 aa15.35■□□□□ 0.05
HERC1-205ENST00000559886 ZBTB3Q9H5J0 574 aa15.35■□□□□ 0.05
HERC1-205ENST00000559886 LRRC4BQ9NT99 713 aa15.35■□□□□ 0.05
HERC1-205ENST00000559886 RGPD3A6NKT7 1758 aaPredicted RBP15.35■□□□□ 0.05
HERC1-205ENST00000559886 RGPD4Q7Z3J3 1758 aa15.35■□□□□ 0.05
HERC1-205ENST00000559886 MAP3K15Q6ZN16 1313 aa15.34■□□□□ 0.05
HERC1-205ENST00000559886 CWF19L2Q2TBE0 894 aaKnown RBP15.34■□□□□ 0.05
HERC1-205ENST00000559886 NPM2Q86SE8 214 aaKnown RBP15.34■□□□□ 0.05
HERC1-205ENST00000559886 MYD88Q99836 296 aa15.34■□□□□ 0.05
HERC1-205ENST00000559886 APBA3O96018 575 aa15.34■□□□□ 0.05
HERC1-205ENST00000559886 GNAI3P08754 354 aa15.34■□□□□ 0.05
HERC1-205ENST00000559886 ANKRD36CQ5JPF3 1778 aa15.33■□□□□ 0.05
HERC1-205ENST00000559886 NEURL1BA8MQ27 555 aa15.33■□□□□ 0.04
HERC1-205ENST00000559886 ERVV-1B6SEH8 477 aa15.33■□□□□ 0.04
HERC1-205ENST00000559886 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
HERC1-205ENST00000559886 PROM2Q8N271 834 aa15.33■□□□□ 0.04
HERC1-205ENST00000559886 COL15A1P39059 1388 aa15.32■□□□□ 0.04
HERC1-205ENST00000559886 TXNRD1Q16881 649 aa15.32■□□□□ 0.04
HERC1-205ENST00000559886 C1orf115Q9H7X2 142 aa15.32■□□□□ 0.04
HERC1-205ENST00000559886 RPS6KA4O75676 772 aa15.32■□□□□ 0.04
HERC1-205ENST00000559886 GIGYF2Q6Y7W6 1299 aaKnown RBP15.32■□□□□ 0.04
HERC1-205ENST00000559886 ARXQ96QS3 562 aa15.32■□□□□ 0.04
HERC1-205ENST00000559886 TBC1D2BQ9UPU7 963 aa15.32■□□□□ 0.04
HERC1-205ENST00000559886 KDM2BQ8NHM5 1336 aa15.31■□□□□ 0.04
HERC1-205ENST00000559886 BCORQ6W2J9 1755 aa15.31■□□□□ 0.04
HERC1-205ENST00000559886 HMGB2P26583 209 aaKnown RBP15.31■□□□□ 0.04
HERC1-205ENST00000559886 TCIRG1Q13488 830 aa15.31■□□□□ 0.04
HERC1-205ENST00000559886 GCKRQ14397 625 aa15.31■□□□□ 0.04
HERC1-205ENST00000559886 UTYO14607 1347 aa15.31■□□□□ 0.04
HERC1-205ENST00000559886 ATP5J2-PTCD1G3V325 749 aa15.31■□□□□ 0.04
HERC1-205ENST00000559886 IGHDP01880 384 aa15.31■□□□□ 0.04
HERC1-205ENST00000559886 GNAI2P04899 355 aa15.31■□□□□ 0.04
HERC1-205ENST00000559886 NBPF7P0C2Y1 421 aaPredicted RBP15.31■□□□□ 0.04
HERC1-205ENST00000559886 UBTFL1P0CB47 393 aaPredicted RBP15.31■□□□□ 0.04
HERC1-205ENST00000559886 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
HERC1-205ENST00000559886 A0A087WZG4 1122 aa15.3■□□□□ 0.04
HERC1-205ENST00000559886 GRM8O00222 908 aa15.3■□□□□ 0.04
HERC1-205ENST00000559886 HDAC1Q13547 482 aaPredicted RBP15.3■□□□□ 0.04
HERC1-205ENST00000559886 HLFQ16534 295 aa15.3■□□□□ 0.04
HERC1-205ENST00000559886 ISCA1Q9BUE6 129 aa15.3■□□□□ 0.04
HERC1-205ENST00000559886 C9orf78Q9NZ63 289 aaPredicted RBP15.3■□□□□ 0.04
HERC1-205ENST00000559886 GNPATO15228 680 aa15.29■□□□□ 0.04
HERC1-205ENST00000559886 TRIM28Q13263 835 aaKnown RBP15.29■□□□□ 0.04
HERC1-205ENST00000559886 RWDD1Q9H446 243 aaPredicted RBP15.29■□□□□ 0.04
HERC1-205ENST00000559886 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
HERC1-205ENST00000559886 HSP90AB3PQ58FF7 597 aa15.29■□□□□ 0.04
HERC1-205ENST00000559886 CENPQQ7L2Z9 268 aaPredicted RBP15.29■□□□□ 0.04
HERC1-205ENST00000559886 CCDC191Q8NCU4 936 aa15.29■□□□□ 0.04
HERC1-205ENST00000559886 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
HERC1-205ENST00000559886 SIRT2Q8IXJ6 389 aa15.28■□□□□ 0.04
HERC1-205ENST00000559886 RPAP2Q8IXW5 612 aaPredicted RBP15.28■□□□□ 0.04
HERC1-205ENST00000559886 AK7Q96M32 723 aa15.28■□□□□ 0.04
HERC1-205ENST00000559886 C4AP0C0L4 1744 aa15.28■□□□□ 0.04
HERC1-205ENST00000559886 ANKRD44Q8N8A2 993 aa15.28■□□□□ 0.04
HERC1-205ENST00000559886 CWC25Q9NXE8 425 aaPredicted RBP15.28■□□□□ 0.04
HERC1-205ENST00000559886 LRRFIP2Q9Y608 721 aaKnown RBP15.28■□□□□ 0.04
HERC1-205ENST00000559886 SCN7AQ01118 1682 aa15.28■□□□□ 0.04
HERC1-205ENST00000559886 CEP85Q6P2H3 762 aa15.27■□□□□ 0.04
HERC1-205ENST00000559886 HDAC5Q9UQL6 1122 aa15.27■□□□□ 0.04
HERC1-205ENST00000559886 RGL2O15211 777 aa15.27■□□□□ 0.03
HERC1-205ENST00000559886 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.03
HERC1-205ENST00000559886 SMIM5Q71RC9 77 aa15.26■□□□□ 0.03
HERC1-205ENST00000559886 H7C1W4 665 aa15.25■□□□□ 0.03
HERC1-205ENST00000559886 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
HERC1-205ENST00000559886 ZNF34Q8IZ26 560 aa15.25■□□□□ 0.03
HERC1-205ENST00000559886 NARFQ9UHQ1 456 aa15.25■□□□□ 0.03
HERC1-205ENST00000559886 ADRA2BP18089 450 aa15.25■□□□□ 0.03
HERC1-205ENST00000559886 CASP7P55210 303 aa15.25■□□□□ 0.03
HERC1-205ENST00000559886 ARHGEF1Q92888 912 aaKnown RBP15.25■□□□□ 0.03
HERC1-205ENST00000559886 ZNF652Q9Y2D9 606 aa15.25■□□□□ 0.03
HERC1-205ENST00000559886 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
HERC1-205ENST00000559886 UBE3BQ7Z3V4 1068 aa15.24■□□□□ 0.03
HERC1-205ENST00000559886 NLRP10Q86W26 655 aa15.24■□□□□ 0.03
HERC1-205ENST00000559886 CAMKK2Q96RR4 588 aa15.24■□□□□ 0.03
HERC1-205ENST00000559886 GPTP24298 496 aa15.24■□□□□ 0.03
HERC1-205ENST00000559886 ATP8B2P98198 1209 aa15.24■□□□□ 0.03
HERC1-205ENST00000559886 KAZALD1Q96I82 304 aa15.24■□□□□ 0.03
HERC1-205ENST00000559886 SSFA2P28290 1259 aa15.23■□□□□ 0.03
HERC1-205ENST00000559886 SUCLG2Q96I99 432 aa15.23■□□□□ 0.03
HERC1-205ENST00000559886 TUBGCP6Q96RT7 1819 aa15.23■□□□□ 0.03
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