RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 COL13A1Q5TAT6 717 aaPredicted RBP14.91□□□□□ -0.02
HERC1-204ENST00000559715 PDZRN3Q9UPQ7 1066 aa14.91□□□□□ -0.02
HERC1-204ENST00000559715 KLRG2A4D1S0 409 aaPredicted RBP14.9□□□□□ -0.02
HERC1-204ENST00000559715 PPP2R1AP30153 589 aa14.9□□□□□ -0.02
HERC1-204ENST00000559715 ZNF622Q969S3 477 aaKnown RBP eCLIP14.9□□□□□ -0.02
HERC1-204ENST00000559715 DCTN1Q14203 1278 aa14.89□□□□□ -0.03
HERC1-204ENST00000559715 STYK1Q6J9G0 422 aa14.89□□□□□ -0.03
HERC1-204ENST00000559715 MCM10Q7L590 875 aa14.89□□□□□ -0.03
HERC1-204ENST00000559715 DZIP3Q86Y13 1208 aaKnown RBP14.89□□□□□ -0.03
HERC1-204ENST00000559715 SETDB2Q96T68 719 aa14.89□□□□□ -0.03
HERC1-204ENST00000559715 ZNF330Q9Y3S2 320 aaPredicted RBP14.89□□□□□ -0.03
HERC1-204ENST00000559715 KDM3BQ7LBC6 1761 aa14.88□□□□□ -0.03
HERC1-204ENST00000559715 NUP98P52948 1817 aa14.88□□□□□ -0.03
HERC1-204ENST00000559715 POTEIP0CG38 1075 aa14.88□□□□□ -0.03
HERC1-204ENST00000559715 POTEJP0CG39 1038 aa14.88□□□□□ -0.03
HERC1-204ENST00000559715 PRPF40BQ6NWY9 871 aaKnown RBP14.88□□□□□ -0.03
HERC1-204ENST00000559715 CLEC4GQ6UXB4 293 aa14.88□□□□□ -0.03
HERC1-204ENST00000559715 CNBD1Q8NA66 436 aa14.88□□□□□ -0.03
HERC1-204ENST00000559715 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
HERC1-204ENST00000559715 SNED1Q8TER0 1413 aa14.88□□□□□ -0.03
HERC1-204ENST00000559715 LAMB4A4D0S4 1761 aa14.88□□□□□ -0.03
HERC1-204ENST00000559715 SNRPA1P09661 255 aaKnown RBP14.86□□□□□ -0.03
HERC1-204ENST00000559715 KCNA4P22459 653 aa14.86□□□□□ -0.03
HERC1-204ENST00000559715 ERFEQ4G0M1 354 aa14.86□□□□□ -0.03
HERC1-204ENST00000559715 MASTLQ96GX5 879 aa14.86□□□□□ -0.03
HERC1-204ENST00000559715 SCN4AP35499 1836 aa14.86□□□□□ -0.03
HERC1-204ENST00000559715 RGL2O15211 777 aa14.85□□□□□ -0.03
HERC1-204ENST00000559715 DDNO94850 711 aaPredicted RBP14.85□□□□□ -0.03
HERC1-204ENST00000559715 HLFQ16534 295 aa14.85□□□□□ -0.03
HERC1-204ENST00000559715 OLFM4Q6UX06 510 aa14.85□□□□□ -0.03
HERC1-204ENST00000559715 CNKSR1Q969H4 720 aa14.85□□□□□ -0.03
HERC1-204ENST00000559715 TAOK3Q9H2K8 898 aa14.85□□□□□ -0.03
HERC1-204ENST00000559715 ADAMTSL1Q8N6G6 1762 aa14.85□□□□□ -0.03
HERC1-204ENST00000559715 HTATSF1O43719 755 aaKnown RBP14.84□□□□□ -0.03
HERC1-204ENST00000559715 U2AF1L5P0DN76 240 aaPredicted RBP14.84□□□□□ -0.03
HERC1-204ENST00000559715 U2AF1Q01081 240 aaKnown RBP eCLIP14.84□□□□□ -0.034e-8■■■□□ 15.4
HERC1-204ENST00000559715 DPY19L2Q6NUT2 758 aa14.84□□□□□ -0.03
HERC1-204ENST00000559715 MIS18AQ9NYP9 233 aa14.84□□□□□ -0.03
HERC1-204ENST00000559715 CFAP53Q96M91 514 aa14.83□□□□□ -0.04
HERC1-204ENST00000559715 COL4A5P29400 1685 aa14.82□□□□□ -0.04
HERC1-204ENST00000559715 ST5P78524 1137 aa14.82□□□□□ -0.04
HERC1-204ENST00000559715 TAF7Q15545 349 aaPredicted RBP14.82□□□□□ -0.04
HERC1-204ENST00000559715 NBPF5PQ86XG9 351 aaPredicted RBP14.82□□□□□ -0.04
HERC1-204ENST00000559715 L3MBTL3Q96JM7 780 aaPredicted RBP14.82□□□□□ -0.04
HERC1-204ENST00000559715 PLEKHF1Q96S99 279 aa14.82□□□□□ -0.04
HERC1-204ENST00000559715 NUDCQ9Y266 331 aa14.82□□□□□ -0.04
HERC1-204ENST00000559715 NPR1P16066 1061 aa14.81□□□□□ -0.04
HERC1-204ENST00000559715 PASKQ96RG2 1323 aa14.81□□□□□ -0.04
HERC1-204ENST00000559715 ITGBL1O95965 494 aaPredicted RBP14.8□□□□□ -0.04
HERC1-204ENST00000559715 CRY2Q49AN0 593 aa14.8□□□□□ -0.04
HERC1-204ENST00000559715 CHADLQ6NUI6 762 aa14.8□□□□□ -0.04
HERC1-204ENST00000559715 SLC51AQ86UW1 340 aa14.8□□□□□ -0.04
HERC1-204ENST00000559715 RTF1Q92541 710 aaKnown RBP14.8□□□□□ -0.04
HERC1-204ENST00000559715 NIP7Q9Y221 180 aaKnown RBP eCLIP14.8□□□□□ -0.04
HERC1-204ENST00000559715 ABCC12Q96J65 1359 aa14.8□□□□□ -0.04
HERC1-204ENST00000559715 HSPA1AP0DMV8 641 aaKnown RBP14.79□□□□□ -0.04
HERC1-204ENST00000559715 HSPA1BP0DMV9 641 aaKnown RBP14.79□□□□□ -0.04
HERC1-204ENST00000559715 SOGA3Q5TF21 947 aa14.79□□□□□ -0.04
HERC1-204ENST00000559715 TPTE2Q6XPS3 522 aa14.79□□□□□ -0.04
HERC1-204ENST00000559715 ZNF541Q9H0D2 1346 aa14.79□□□□□ -0.04
HERC1-204ENST00000559715 TAF1DQ9H5J8 278 aaPredicted RBP14.79□□□□□ -0.04
HERC1-204ENST00000559715 LTBP1Q14766 1721 aa14.78□□□□□ -0.04
HERC1-204ENST00000559715 EIF4A1P60842 406 aaKnown RBP14.78□□□□□ -0.04
HERC1-204ENST00000559715 FKBP4Q02790 459 aaKnown RBP eCLIP14.78□□□□□ -0.04
HERC1-204ENST00000559715 CCDC93Q567U6 631 aa14.78□□□□□ -0.04
HERC1-204ENST00000559715 TTLL7Q6ZT98 887 aa14.78□□□□□ -0.04
HERC1-204ENST00000559715 LRP10Q7Z4F1 713 aa14.78□□□□□ -0.04
HERC1-204ENST00000559715 ZNF277Q9NRM2 450 aaPredicted RBP14.78□□□□□ -0.04
HERC1-204ENST00000559715 CREBZFQ9NS37 354 aa14.78□□□□□ -0.04
HERC1-204ENST00000559715 ZNF652Q9Y2D9 606 aa14.78□□□□□ -0.04
HERC1-204ENST00000559715 UBN2Q6ZU65 1347 aa14.77□□□□□ -0.04
HERC1-204ENST00000559715 FZD9O00144 591 aa14.77□□□□□ -0.05
HERC1-204ENST00000559715 NPM2Q86SE8 214 aaKnown RBP14.77□□□□□ -0.05
HERC1-204ENST00000559715 THUMPD2Q9BTF0 503 aaKnown RBP14.77□□□□□ -0.05
HERC1-204ENST00000559715 FAM177BA6PVY3 158 aa14.76□□□□□ -0.05
HERC1-204ENST00000559715 ERVV-1B6SEH8 477 aa14.76□□□□□ -0.05
HERC1-204ENST00000559715 HOXA10P31260 410 aaPredicted RBP14.76□□□□□ -0.05
HERC1-204ENST00000559715 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
HERC1-204ENST00000559715 RIC1Q4ADV7 1423 aa14.75□□□□□ -0.05
HERC1-204ENST00000559715 MAP3K15Q6ZN16 1313 aa14.75□□□□□ -0.05
HERC1-204ENST00000559715 NPHP1O15259 732 aa14.75□□□□□ -0.05
HERC1-204ENST00000559715 C3orf67Q6ZVT6 689 aa14.75□□□□□ -0.05
HERC1-204ENST00000559715 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
HERC1-204ENST00000559715 NUTM1Q86Y26 1132 aa14.75□□□□□ -0.05
HERC1-204ENST00000559715 CNTNAP1P78357 1384 aa14.74□□□□□ -0.05
HERC1-204ENST00000559715 PDIA6Q15084 440 aa14.74□□□□□ -0.05
HERC1-204ENST00000559715 NFE2L2Q16236 605 aa14.74□□□□□ -0.05
HERC1-204ENST00000559715 ZNF34Q8IZ26 560 aa14.74□□□□□ -0.05
HERC1-204ENST00000559715 RTKN2Q8IZC4 609 aa14.74□□□□□ -0.05
HERC1-204ENST00000559715 SYNE4Q8N205 404 aa14.74□□□□□ -0.05
HERC1-204ENST00000559715 PSMD1Q99460 953 aa14.74□□□□□ -0.05
HERC1-204ENST00000559715 MKRN1Q9UHC7 482 aaKnown RBP14.74□□□□□ -0.05
HERC1-204ENST00000559715 LAMB2P55268 1798 aa14.74□□□□□ -0.05
HERC1-204ENST00000559715 IBTKQ9P2D0 1353 aaPredicted RBP14.73□□□□□ -0.05
HERC1-204ENST00000559715 IQCA1LA6NCM1 817 aa14.73□□□□□ -0.05
HERC1-204ENST00000559715 ALDH1B1P30837 517 aa14.73□□□□□ -0.05
HERC1-204ENST00000559715 IARSP41252 1262 aaKnown RBP14.73□□□□□ -0.05
HERC1-204ENST00000559715 SUSD4Q5VX71 490 aa14.73□□□□□ -0.05
HERC1-204ENST00000559715 TNS4Q8IZW8 715 aa14.73□□□□□ -0.05
HERC1-204ENST00000559715 NTSR2O95665 410 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms