RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 HTRA3P83110 453 aa31.86■■■□□ 2.69
PBX1-217ENST00000559578 CLEC4GQ6UXB4 293 aa31.86■■■□□ 2.69
PBX1-217ENST00000559578 PRAMEF22A3QJZ6 481 aa31.85■■■□□ 2.69
PBX1-217ENST00000559578 DPY19L2Q6NUT2 758 aa31.85■■■□□ 2.69
PBX1-217ENST00000559578 KLRG1Q96E93 195 aa31.85■■■□□ 2.69
PBX1-217ENST00000559578 ZNF652Q9Y2D9 606 aa31.85■■■□□ 2.69
PBX1-217ENST00000559578 FER1L6Q2WGJ9 1857 aa31.84■■■□□ 2.69
PBX1-217ENST00000559578 STYK1Q6J9G0 422 aa31.84■■■□□ 2.69
PBX1-217ENST00000559578 DCTN1Q14203 1278 aa31.83■■■□□ 2.69
PBX1-217ENST00000559578 SRGNP10124 158 aa31.82■■■□□ 2.68
PBX1-217ENST00000559578 ERFEQ4G0M1 354 aa31.82■■■□□ 2.68
PBX1-217ENST00000559578 NBPF5PQ86XG9 351 aaPredicted RBP31.82■■■□□ 2.68
PBX1-217ENST00000559578 MASTLQ96GX5 879 aa31.82■■■□□ 2.68
PBX1-217ENST00000559578 DICER1Q9UPY3 1922 aaKnown RBP31.82■■■□□ 2.68
PBX1-217ENST00000559578 SOGA3Q5TF21 947 aa31.81■■■□□ 2.68
PBX1-217ENST00000559578 TAOK3Q9H2K8 898 aa31.81■■■□□ 2.68
PBX1-217ENST00000559578 LTBP3Q9NS15 1303 aa31.8■■■□□ 2.68
PBX1-217ENST00000559578 NEFMP07197 916 aa31.8■■■□□ 2.68
PBX1-217ENST00000559578 TAF7Q15545 349 aaPredicted RBP31.8■■■□□ 2.68
PBX1-217ENST00000559578 CACNA1SQ13698 1873 aa31.8■■■□□ 2.68
PBX1-217ENST00000559578 SLX4Q8IY92 1834 aa31.79■■■□□ 2.68
PBX1-217ENST00000559578 PRPF40BQ6NWY9 871 aaKnown RBP31.79■■■□□ 2.68
PBX1-217ENST00000559578 ARFGEF2Q9Y6D5 1785 aa31.77■■■□□ 2.68
PBX1-217ENST00000559578 RGL2O15211 777 aa31.77■■■□□ 2.68
PBX1-217ENST00000559578 NBPF26B4DH59 902 aa31.76■■■□□ 2.67
PBX1-217ENST00000559578 NBPF10Q6P3W6 841 aaKnown RBP31.76■■■□□ 2.67
PBX1-217ENST00000559578 TPTE2Q6XPS3 522 aa31.76■■■□□ 2.67
PBX1-217ENST00000559578 NBPF15Q8N660 670 aa31.76■■■□□ 2.67
PBX1-217ENST00000559578 JMYQ8N9B5 988 aa31.76■■■□□ 2.67
PBX1-217ENST00000559578 NIP7Q9Y221 180 aaKnown RBP eCLIP31.76■■■□□ 2.67
PBX1-217ENST00000559578 POTECB2RU33 542 aa31.74■■■□□ 2.67
PBX1-217ENST00000559578 NPR1P16066 1061 aa31.73■■■□□ 2.67
PBX1-217ENST00000559578 MIS18AQ9NYP9 233 aa31.73■■■□□ 2.67
PBX1-217ENST00000559578 PNISRQ8TF01 805 aaKnown RBP31.71■■■□□ 2.67
PBX1-217ENST00000559578 LAMB4A4D0S4 1761 aa31.71■■■□□ 2.67
PBX1-217ENST00000559578 DLG5Q8TDM6 1919 aa31.71■■■□□ 2.67
PBX1-217ENST00000559578 KLRG2A4D1S0 409 aaPredicted RBP31.69■■■□□ 2.66
PBX1-217ENST00000559578 CCDC93Q567U6 631 aa31.69■■■□□ 2.66
PBX1-217ENST00000559578 C7orf43Q8WVR3 580 aa31.68■■■□□ 2.66
PBX1-217ENST00000559578 FAM177BA6PVY3 158 aa31.67■■■□□ 2.66
PBX1-217ENST00000559578 GTF2E1P29083 439 aaPredicted RBP31.67■■■□□ 2.66
PBX1-217ENST00000559578 HLFQ16534 295 aa31.67■■■□□ 2.66
PBX1-217ENST00000559578 DDNO94850 711 aaPredicted RBP31.66■■■□□ 2.66
PBX1-217ENST00000559578 KDM3BQ7LBC6 1761 aa31.65■■■□□ 2.66
PBX1-217ENST00000559578 NGEFQ8N5V2 710 aa31.64■■■□□ 2.66
PBX1-217ENST00000559578 PLEKHF1Q96S99 279 aa31.64■■■□□ 2.66
PBX1-217ENST00000559578 PNNQ9H307 717 aaKnown RBP31.64■■■□□ 2.66
PBX1-217ENST00000559578 ALDH1B1P30837 517 aa31.63■■■□□ 2.65
PBX1-217ENST00000559578 NFE2L2Q16236 605 aa31.63■■■□□ 2.65
PBX1-217ENST00000559578 ERVV-1B6SEH8 477 aa31.62■■■□□ 2.65
PBX1-217ENST00000559578 FKBP4Q02790 459 aaKnown RBP eCLIP31.62■■■□□ 2.65
PBX1-217ENST00000559578 CHADLQ6NUI6 762 aa31.62■■■□□ 2.65
PBX1-217ENST00000559578 NYXQ9GZU5 481 aa31.62■■■□□ 2.65
PBX1-217ENST00000559578 MAPK8IP3Q9UPT6 1336 aa31.61■■■□□ 2.65
PBX1-217ENST00000559578 IQCA1LA6NCM1 817 aa31.61■■■□□ 2.65
PBX1-217ENST00000559578 EIF4A1P60842 406 aaKnown RBP31.61■■■□□ 2.65
PBX1-217ENST00000559578 RTKN2Q8IZC4 609 aa31.61■■■□□ 2.65
PBX1-217ENST00000559578 KIF6Q6ZMV9 814 aa31.6■■■□□ 2.65
PBX1-217ENST00000559578 RRP7AQ9Y3A4 280 aaKnown RBP31.6■■■□□ 2.65
PBX1-217ENST00000559578 NUP98P52948 1817 aa31.59■■■□□ 2.65
PBX1-217ENST00000559578 MAP3K15Q6ZN16 1313 aa31.59■■■□□ 2.65
PBX1-217ENST00000559578 THUMPD2Q9BTF0 503 aaKnown RBP31.58■■■□□ 2.65
PBX1-217ENST00000559578 ZNF277Q9NRM2 450 aaPredicted RBP31.58■■■□□ 2.65
PBX1-217ENST00000559578 SCN4AP35499 1836 aa31.57■■■□□ 2.64
PBX1-217ENST00000559578 L3MBTL3Q96JM7 780 aaPredicted RBP31.57■■■□□ 2.64
PBX1-217ENST00000559578 MYL6BP14649 208 aa31.56■■■□□ 2.64
PBX1-217ENST00000559578 OLFM4Q6UX06 510 aa31.56■■■□□ 2.64
PBX1-217ENST00000559578 POTEIP0CG38 1075 aa31.55■■■□□ 2.64
PBX1-217ENST00000559578 POTEJP0CG39 1038 aa31.55■■■□□ 2.64
PBX1-217ENST00000559578 COL13A1Q5TAT6 717 aaPredicted RBP31.55■■■□□ 2.64
PBX1-217ENST00000559578 NUTM1Q86Y26 1132 aa31.55■■■□□ 2.64
PBX1-217ENST00000559578 CRY2Q49AN0 593 aa31.54■■■□□ 2.64
PBX1-217ENST00000559578 TTLL7Q6ZT98 887 aa31.54■■■□□ 2.64
PBX1-217ENST00000559578 CREBZFQ9NS37 354 aa31.53■■■□□ 2.64
PBX1-217ENST00000559578 ABCC12Q96J65 1359 aa31.53■■■□□ 2.64
PBX1-217ENST00000559578 IARSP41252 1262 aaKnown RBP31.52■■■□□ 2.64
PBX1-217ENST00000559578 LDHDQ86WU2 507 aa31.52■■■□□ 2.64
PBX1-217ENST00000559578 ZBTB3Q9H5J0 574 aa31.52■■■□□ 2.64
PBX1-217ENST00000559578 TAF1DQ9H5J8 278 aaPredicted RBP31.52■■■□□ 2.64
PBX1-217ENST00000559578 ERBB4Q15303 1308 aa31.51■■■□□ 2.64
PBX1-217ENST00000559578 GPTP24298 496 aa31.51■■■□□ 2.63
PBX1-217ENST00000559578 SYNE4Q8N205 404 aa31.51■■■□□ 2.63
PBX1-217ENST00000559578 RPGRQ92834 1020 aaKnown RBP31.51■■■□□ 2.63
PBX1-217ENST00000559578 IBTKQ9P2D0 1353 aaPredicted RBP31.51■■■□□ 2.63
PBX1-217ENST00000559578 ZNF541Q9H0D2 1346 aa31.5■■■□□ 2.63
PBX1-217ENST00000559578 TSPYL4Q9UJ04 414 aa31.5■■■□□ 2.63
PBX1-217ENST00000559578 HSPA1AP0DMV8 641 aaKnown RBP31.49■■■□□ 2.63
PBX1-217ENST00000559578 HSPA1BP0DMV9 641 aaKnown RBP31.49■■■□□ 2.63
PBX1-217ENST00000559578 CC2D2BQ6DHV5 1058 aa31.49■■■□□ 2.63
PBX1-217ENST00000559578 PSMD1Q99460 953 aa31.49■■■□□ 2.63
PBX1-217ENST00000559578 HACL1Q9UJ83 578 aa31.49■■■□□ 2.63
PBX1-217ENST00000559578 UBN2Q6ZU65 1347 aa31.49■■■□□ 2.63
PBX1-217ENST00000559578 RIC1Q4ADV7 1423 aa31.48■■■□□ 2.63
PBX1-217ENST00000559578 FZD9O00144 591 aa31.47■■■□□ 2.63
PBX1-217ENST00000559578 SUSD4Q5VX71 490 aa31.47■■■□□ 2.63
PBX1-217ENST00000559578 GIGYF2Q6Y7W6 1299 aaKnown RBP31.47■■■□□ 2.63
PBX1-217ENST00000559578 JDP2Q8WYK2 163 aa31.47■■■□□ 2.63
PBX1-217ENST00000559578 PCNTO95613 3336 aa31.46■■■□□ 2.63
PBX1-217ENST00000559578 HOXA10P31260 410 aaPredicted RBP31.46■■■□□ 2.63
PBX1-217ENST00000559578 RIPK4P57078 832 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms