RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 NBPF15Q8N660 670 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 JMYQ8N9B5 988 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 FMNL2Q96PY5 1086 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 BRIP1Q9BX63 1249 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 DLG5Q8TDM6 1919 aa7.79□□□□□ -1.16
USP3-212ENST00000559276 A0A087WZG4 1122 aa7.78□□□□□ -1.16
USP3-212ENST00000559276 BTBD11A6QL63 1104 aa7.78□□□□□ -1.16
USP3-212ENST00000559276 DCTN1Q14203 1278 aa7.78□□□□□ -1.16
USP3-212ENST00000559276 MCM10Q7L590 875 aa7.78□□□□□ -1.16
USP3-212ENST00000559276 KLRG1Q96E93 195 aa7.78□□□□□ -1.16
USP3-212ENST00000559276 TEX13AQ9BXU3 409 aaPredicted RBP7.78□□□□□ -1.16
USP3-212ENST00000559276 KDM3BQ7LBC6 1761 aa7.78□□□□□ -1.16
USP3-212ENST00000559276 LAMB4A4D0S4 1761 aa7.77□□□□□ -1.17
USP3-212ENST00000559276 C21orf2O43822 256 aa7.77□□□□□ -1.17
USP3-212ENST00000559276 SRGNP10124 158 aa7.77□□□□□ -1.17
USP3-212ENST00000559276 C7orf43Q8WVR3 580 aa7.77□□□□□ -1.17
USP3-212ENST00000559276 ZNF330Q9Y3S2 320 aaPredicted RBP7.77□□□□□ -1.17
USP3-212ENST00000559276 KLRG2A4D1S0 409 aaPredicted RBP7.76□□□□□ -1.17
USP3-212ENST00000559276 VEGFAP15692 232 aaPredicted RBP7.76□□□□□ -1.17
USP3-212ENST00000559276 PDE6BP35913 854 aa7.76□□□□□ -1.17
USP3-212ENST00000559276 DZIP3Q86Y13 1208 aaKnown RBP7.76□□□□□ -1.17
USP3-212ENST00000559276 C16orf71Q8IYS4 520 aaPredicted RBP7.76□□□□□ -1.17
USP3-212ENST00000559276 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
USP3-212ENST00000559276 ZNF622Q969S3 477 aaKnown RBP eCLIP7.76□□□□□ -1.17
USP3-212ENST00000559276 SETDB2Q96T68 719 aa7.76□□□□□ -1.17
USP3-212ENST00000559276 ZNF219Q9P2Y4 722 aaPredicted RBP7.76□□□□□ -1.17
USP3-212ENST00000559276 SNED1Q8TER0 1413 aa7.76□□□□□ -1.17
USP3-212ENST00000559276 LTBP3Q9NS15 1303 aa7.76□□□□□ -1.17
USP3-212ENST00000559276 SNRPA1P09661 255 aaKnown RBP7.75□□□□□ -1.17
USP3-212ENST00000559276 POTEIP0CG38 1075 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 POTEJP0CG39 1038 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 U2AF1L5P0DN76 240 aaPredicted RBP7.75□□□□□ -1.17
USP3-212ENST00000559276 U2AF1Q01081 240 aaKnown RBP eCLIP7.75□□□□□ -1.178e-9■□□□□ 10.7
USP3-212ENST00000559276 HLFQ16534 295 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 STYK1Q6J9G0 422 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 PRPF40BQ6NWY9 871 aaKnown RBP7.75□□□□□ -1.17
USP3-212ENST00000559276 OLFM4Q6UX06 510 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 CNBD1Q8NA66 436 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 CFAP53Q96M91 514 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 PLEKHF1Q96S99 279 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 MIS18AQ9NYP9 233 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 PDZRN3Q9UPQ7 1066 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 NUP98P52948 1817 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 FANCIQ9NVI1 1328 aa7.75□□□□□ -1.17
USP3-212ENST00000559276 ADAMTSL1Q8N6G6 1762 aa7.74□□□□□ -1.17
USP3-212ENST00000559276 HTATSF1O43719 755 aaKnown RBP7.74□□□□□ -1.17
USP3-212ENST00000559276 PRKCSHP14314 528 aaPredicted RBP7.74□□□□□ -1.17
USP3-212ENST00000559276 ERFEQ4G0M1 354 aa7.74□□□□□ -1.17
USP3-212ENST00000559276 COL13A1Q5TAT6 717 aaPredicted RBP7.74□□□□□ -1.17
USP3-212ENST00000559276 CLEC4GQ6UXB4 293 aa7.74□□□□□ -1.17
USP3-212ENST00000559276 MASTLQ96GX5 879 aa7.74□□□□□ -1.17
USP3-212ENST00000559276 COL4A5P29400 1685 aa7.73□□□□□ -1.17
USP3-212ENST00000559276 RGL2O15211 777 aa7.73□□□□□ -1.17
USP3-212ENST00000559276 DDNO94850 711 aaPredicted RBP7.73□□□□□ -1.17
USP3-212ENST00000559276 DDX10Q13206 875 aaKnown RBP7.73□□□□□ -1.17
USP3-212ENST00000559276 SLC51AQ86UW1 340 aa7.73□□□□□ -1.17
USP3-212ENST00000559276 CNKSR1Q969H4 720 aa7.73□□□□□ -1.17
USP3-212ENST00000559276 TAOK3Q9H2K8 898 aa7.73□□□□□ -1.17
USP3-212ENST00000559276 NUDCQ9Y266 331 aa7.73□□□□□ -1.17
USP3-212ENST00000559276 SCN4AP35499 1836 aa7.73□□□□□ -1.17
USP3-212ENST00000559276 ABCC12Q96J65 1359 aa7.72□□□□□ -1.17
USP3-212ENST00000559276 ST5P78524 1137 aa7.72□□□□□ -1.17
USP3-212ENST00000559276 TAF7Q15545 349 aaPredicted RBP7.72□□□□□ -1.17
USP3-212ENST00000559276 NBPF5PQ86XG9 351 aaPredicted RBP7.72□□□□□ -1.17
USP3-212ENST00000559276 RTF1Q92541 710 aaKnown RBP7.72□□□□□ -1.17
USP3-212ENST00000559276 THUMPD2Q9BTF0 503 aaKnown RBP7.72□□□□□ -1.17
USP3-212ENST00000559276 NIP7Q9Y221 180 aaKnown RBP eCLIP7.72□□□□□ -1.17
USP3-212ENST00000559276 ZNF541Q9H0D2 1346 aa7.72□□□□□ -1.17
USP3-212ENST00000559276 LTBP1Q14766 1721 aa7.72□□□□□ -1.17
USP3-212ENST00000559276 NPR1P16066 1061 aa7.71□□□□□ -1.18
USP3-212ENST00000559276 EIF4A1P60842 406 aaKnown RBP7.71□□□□□ -1.18
USP3-212ENST00000559276 CRY2Q49AN0 593 aa7.71□□□□□ -1.18
USP3-212ENST00000559276 DPY19L2Q6NUT2 758 aa7.71□□□□□ -1.18
USP3-212ENST00000559276 TTLL7Q6ZT98 887 aa7.71□□□□□ -1.18
USP3-212ENST00000559276 LRP10Q7Z4F1 713 aa7.71□□□□□ -1.18
USP3-212ENST00000559276 L3MBTL3Q96JM7 780 aaPredicted RBP7.71□□□□□ -1.18
USP3-212ENST00000559276 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.18
USP3-212ENST00000559276 UBN2Q6ZU65 1347 aa7.71□□□□□ -1.18
USP3-212ENST00000559276 PASKQ96RG2 1323 aa7.71□□□□□ -1.18
USP3-212ENST00000559276 FAM177BA6PVY3 158 aa7.7□□□□□ -1.18
USP3-212ENST00000559276 FKBP4Q02790 459 aaKnown RBP eCLIP7.7□□□□□ -1.18
USP3-212ENST00000559276 CCDC93Q567U6 631 aa7.7□□□□□ -1.18
USP3-212ENST00000559276 CHADLQ6NUI6 762 aa7.7□□□□□ -1.18
USP3-212ENST00000559276 TPTE2Q6XPS3 522 aa7.7□□□□□ -1.18
USP3-212ENST00000559276 C3orf67Q6ZVT6 689 aa7.7□□□□□ -1.18
USP3-212ENST00000559276 NUTM1Q86Y26 1132 aa7.7□□□□□ -1.18
USP3-212ENST00000559276 ZNF277Q9NRM2 450 aaPredicted RBP7.7□□□□□ -1.18
USP3-212ENST00000559276 ZNF652Q9Y2D9 606 aa7.7□□□□□ -1.18
USP3-212ENST00000559276 RIC1Q4ADV7 1423 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 LAMB2P55268 1798 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 ERVV-1B6SEH8 477 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 FZD9O00144 591 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 ITGBL1O95965 494 aaPredicted RBP7.69□□□□□ -1.18
USP3-212ENST00000559276 HSPA1AP0DMV8 641 aaKnown RBP7.69□□□□□ -1.18
USP3-212ENST00000559276 HSPA1BP0DMV9 641 aaKnown RBP7.69□□□□□ -1.18
USP3-212ENST00000559276 PDIA6Q15084 440 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 NFE2L2Q16236 605 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 SOGA3Q5TF21 947 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 SUSD4Q5VX71 490 aa7.69□□□□□ -1.18
USP3-212ENST00000559276 NPM2Q86SE8 214 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms