RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 DPEP1P16444 411 aa16.55■□□□□ 0.24
RABGGTA-207ENST00000558936 NGEFQ8N5V2 710 aa16.55■□□□□ 0.24
RABGGTA-207ENST00000558936 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
RABGGTA-207ENST00000558936 CHRNA5P30532 468 aa16.54■□□□□ 0.24
RABGGTA-207ENST00000558936 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
RABGGTA-207ENST00000558936 DUSP27Q5VZP5 1158 aa16.54■□□□□ 0.24
RABGGTA-207ENST00000558936 MIER1Q8N108 512 aa16.54■□□□□ 0.24
RABGGTA-207ENST00000558936 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
RABGGTA-207ENST00000558936 CHD4Q14839 1912 aa16.54■□□□□ 0.24
RABGGTA-207ENST00000558936 TNRC6CQ9HCJ0 1690 aaKnown RBP16.53■□□□□ 0.24
RABGGTA-207ENST00000558936 A0A087WZG4 1122 aa16.53■□□□□ 0.24
RABGGTA-207ENST00000558936 ELL2O00472 640 aaPredicted RBP16.53■□□□□ 0.24
RABGGTA-207ENST00000558936 PRR5LQ6MZQ0 368 aa16.53■□□□□ 0.24
RABGGTA-207ENST00000558936 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.24
RABGGTA-207ENST00000558936 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
RABGGTA-207ENST00000558936 ARFGEF1Q9Y6D6 1849 aa16.52■□□□□ 0.23
RABGGTA-207ENST00000558936 ANKRD36CQ5JPF3 1778 aa16.51■□□□□ 0.23
RABGGTA-207ENST00000558936 MAP3K15Q6ZN16 1313 aa16.51■□□□□ 0.23
RABGGTA-207ENST00000558936 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
RABGGTA-207ENST00000558936 TGFB2P61812 414 aa16.5■□□□□ 0.23
RABGGTA-207ENST00000558936 GNAI1P63096 354 aa16.5■□□□□ 0.23
RABGGTA-207ENST00000558936 CLEC4GQ6UXB4 293 aa16.5■□□□□ 0.23
RABGGTA-207ENST00000558936 ZBTB3Q9H5J0 574 aa16.5■□□□□ 0.23
RABGGTA-207ENST00000558936 GPR162Q16538 588 aa16.49■□□□□ 0.23
RABGGTA-207ENST00000558936 COPS6Q7L5N1 327 aa16.49■□□□□ 0.23
RABGGTA-207ENST00000558936 SLC51AQ86UW1 340 aa16.49■□□□□ 0.23
RABGGTA-207ENST00000558936 ZNF34Q8IZ26 560 aa16.49■□□□□ 0.23
RABGGTA-207ENST00000558936 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
RABGGTA-207ENST00000558936 DDX21Q9NR30 783 aaKnown RBP eCLIP16.49■□□□□ 0.23
RABGGTA-207ENST00000558936 ARFGEF2Q9Y6D5 1785 aa16.49■□□□□ 0.23
RABGGTA-207ENST00000558936 FANCIQ9NVI1 1328 aa16.48■□□□□ 0.23
RABGGTA-207ENST00000558936 ATP10DQ9P241 1426 aa16.48■□□□□ 0.23
RABGGTA-207ENST00000558936 SLX4Q8IY92 1834 aa16.48■□□□□ 0.23
RABGGTA-207ENST00000558936 ERVV-1B6SEH8 477 aa16.48■□□□□ 0.23
RABGGTA-207ENST00000558936 CCER2I3L3R5 266 aa16.48■□□□□ 0.23
RABGGTA-207ENST00000558936 PRELPP51888 382 aa16.48■□□□□ 0.23
RABGGTA-207ENST00000558936 PHAXQ9H814 394 aaKnown RBP16.48■□□□□ 0.23
RABGGTA-207ENST00000558936 ABCC12Q96J65 1359 aa16.48■□□□□ 0.23
RABGGTA-207ENST00000558936 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
RABGGTA-207ENST00000558936 IL16Q14005 1332 aa16.47■□□□□ 0.23
RABGGTA-207ENST00000558936 RGL2O15211 777 aa16.47■□□□□ 0.23
RABGGTA-207ENST00000558936 HOXB7P09629 217 aa16.47■□□□□ 0.23
RABGGTA-207ENST00000558936 HDGFL1Q5TGJ6 251 aa16.47■□□□□ 0.23
RABGGTA-207ENST00000558936 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-207ENST00000558936 C3orf67Q6ZVT6 689 aa16.47■□□□□ 0.23
RABGGTA-207ENST00000558936 PELP1Q8IZL8 1130 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-207ENST00000558936 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
RABGGTA-207ENST00000558936 COL4A1P02462 1669 aa16.46■□□□□ 0.23
RABGGTA-207ENST00000558936 SBF1O95248 1867 aa16.46■□□□□ 0.23
RABGGTA-207ENST00000558936 TCERG1O14776 1098 aaKnown RBP16.46■□□□□ 0.23
RABGGTA-207ENST00000558936 SUSD4Q5VX71 490 aa16.46■□□□□ 0.23
RABGGTA-207ENST00000558936 GIGYF2Q6Y7W6 1299 aaKnown RBP16.46■□□□□ 0.23
RABGGTA-207ENST00000558936 G2E3Q7L622 706 aa16.46■□□□□ 0.23
RABGGTA-207ENST00000558936 WDR63Q8IWG1 891 aa16.46■□□□□ 0.23
RABGGTA-207ENST00000558936 ZNF428Q96B54 188 aa16.46■□□□□ 0.23
RABGGTA-207ENST00000558936 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
RABGGTA-207ENST00000558936 LAMB2P55268 1798 aa16.46■□□□□ 0.22
RABGGTA-207ENST00000558936 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
RABGGTA-207ENST00000558936 GPTP24298 496 aa16.45■□□□□ 0.22
RABGGTA-207ENST00000558936 AIMP1Q12904 312 aaKnown RBP16.45■□□□□ 0.22
RABGGTA-207ENST00000558936 SETDB2Q96T68 719 aa16.45■□□□□ 0.22
RABGGTA-207ENST00000558936 TAF1P21675 1872 aa16.44■□□□□ 0.22
RABGGTA-207ENST00000558936 FAM177BA6PVY3 158 aa16.44■□□□□ 0.22
RABGGTA-207ENST00000558936 VAMP4O75379 141 aa16.44■□□□□ 0.22
RABGGTA-207ENST00000558936 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
RABGGTA-207ENST00000558936 DDX60Q8IY21 1712 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-207ENST00000558936 NTSR2O95665 410 aa16.43■□□□□ 0.22
RABGGTA-207ENST00000558936 YY1P25490 414 aa16.43■□□□□ 0.22
RABGGTA-207ENST00000558936 EXOSC9Q06265 439 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-207ENST00000558936 CDCA7LQ96GN5 454 aa16.43■□□□□ 0.22
RABGGTA-207ENST00000558936 BRIP1Q9BX63 1249 aa16.43■□□□□ 0.22
RABGGTA-207ENST00000558936 ERFEQ4G0M1 354 aa16.42■□□□□ 0.22
RABGGTA-207ENST00000558936 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-207ENST00000558936 BCS1LQ9Y276 419 aa16.42■□□□□ 0.22
RABGGTA-207ENST00000558936 CCDC88AQ3V6T2 1871 aa16.42■□□□□ 0.22
RABGGTA-207ENST00000558936 GRIN3BO60391 1043 aa16.41■□□□□ 0.22
RABGGTA-207ENST00000558936 CALD1Q05682 793 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-207ENST00000558936 NPM2Q86SE8 214 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-207ENST00000558936 C2CD5Q86YS7 1000 aa16.41■□□□□ 0.22
RABGGTA-207ENST00000558936 CNBD1Q8NA66 436 aa16.41■□□□□ 0.22
RABGGTA-207ENST00000558936 ISCA1Q9BUE6 129 aa16.41■□□□□ 0.22
RABGGTA-207ENST00000558936 FER1L6Q2WGJ9 1857 aa16.41■□□□□ 0.22
RABGGTA-207ENST00000558936 SNED1Q8TER0 1413 aa16.4■□□□□ 0.22
RABGGTA-207ENST00000558936 SRGNP10124 158 aa16.4■□□□□ 0.22
RABGGTA-207ENST00000558936 TCIRG1Q13488 830 aa16.4■□□□□ 0.22
RABGGTA-207ENST00000558936 TWISTNBQ3B726 338 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-207ENST00000558936 KIF6Q6ZMV9 814 aa16.4■□□□□ 0.22
RABGGTA-207ENST00000558936 NLRP10Q86W26 655 aa16.4■□□□□ 0.22
RABGGTA-207ENST00000558936 NBPF5PQ86XG9 351 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-207ENST00000558936 TRMT2AQ8IZ69 625 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-207ENST00000558936 PIM2Q9P1W9 311 aa16.4■□□□□ 0.22
RABGGTA-207ENST00000558936 ADCY9O60503 1353 aa16.39■□□□□ 0.21
RABGGTA-207ENST00000558936 OLFM4Q6UX06 510 aa16.39■□□□□ 0.21
RABGGTA-207ENST00000558936 PLBD2Q8NHP8 589 aa16.39■□□□□ 0.21
RABGGTA-207ENST00000558936 C7orf43Q8WVR3 580 aa16.39■□□□□ 0.21
RABGGTA-207ENST00000558936 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
RABGGTA-207ENST00000558936 CACNA1FO60840 1977 aa16.38■□□□□ 0.21
RABGGTA-207ENST00000558936 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
RABGGTA-207ENST00000558936 ANKRD13DQ6ZTN6 518 aa16.38■□□□□ 0.21
RABGGTA-207ENST00000558936 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms