RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 CHRNA5P30532 468 aa14.34□□□□□ -0.11
PBX1-213ENST00000558796 CALD1Q05682 793 aaKnown RBP14.34□□□□□ -0.11
PBX1-213ENST00000558796 PROSER3Q2NL68 480 aa14.34□□□□□ -0.11
PBX1-213ENST00000558796 TTLL7Q6ZT98 887 aa14.34□□□□□ -0.11
PBX1-213ENST00000558796 CCDC24Q8N4L8 307 aa14.34□□□□□ -0.11
PBX1-213ENST00000558796 IFT57Q9NWB7 429 aa14.34□□□□□ -0.11
PBX1-213ENST00000558796 ZNF652Q9Y2D9 606 aa14.34□□□□□ -0.11
PBX1-213ENST00000558796 ERBB4Q15303 1308 aa14.34□□□□□ -0.11
PBX1-213ENST00000558796 SBF1O95248 1867 aa14.33□□□□□ -0.11
PBX1-213ENST00000558796 GRIN3BO60391 1043 aa14.33□□□□□ -0.12
PBX1-213ENST00000558796 ZNF853P0CG23 659 aa14.33□□□□□ -0.12
PBX1-213ENST00000558796 GNAI1P63096 354 aa14.33□□□□□ -0.12
PBX1-213ENST00000558796 HLFQ16534 295 aa14.33□□□□□ -0.12
PBX1-213ENST00000558796 KIF6Q6ZMV9 814 aa14.33□□□□□ -0.12
PBX1-213ENST00000558796 SETDB2Q96T68 719 aa14.33□□□□□ -0.12
PBX1-213ENST00000558796 LAMB2P55268 1798 aa14.32□□□□□ -0.12
PBX1-213ENST00000558796 NPHP1O15259 732 aa14.32□□□□□ -0.12
PBX1-213ENST00000558796 KCNA3P22001 575 aa14.32□□□□□ -0.12
PBX1-213ENST00000558796 PDIA6Q15084 440 aa14.32□□□□□ -0.12
PBX1-213ENST00000558796 PRR5LQ6MZQ0 368 aa14.32□□□□□ -0.12
PBX1-213ENST00000558796 CNBD1Q8NA66 436 aa14.32□□□□□ -0.12
PBX1-213ENST00000558796 ZBTB3Q9H5J0 574 aa14.32□□□□□ -0.12
PBX1-213ENST00000558796 BCS1LQ9Y276 419 aa14.32□□□□□ -0.12
PBX1-213ENST00000558796 SALL2Q9Y467 1007 aaPredicted RBP14.32□□□□□ -0.12
PBX1-213ENST00000558796 CACNA1FO60840 1977 aa14.32□□□□□ -0.12
PBX1-213ENST00000558796 MAP3K15Q6ZN16 1313 aa14.32□□□□□ -0.12
PBX1-213ENST00000558796 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
PBX1-213ENST00000558796 DUSP27Q5VZP5 1158 aa14.31□□□□□ -0.12
PBX1-213ENST00000558796 CLEC4GQ6UXB4 293 aa14.31□□□□□ -0.12
PBX1-213ENST00000558796 LRP10Q7Z4F1 713 aa14.31□□□□□ -0.12
PBX1-213ENST00000558796 WWC1Q8IX03 1113 aa14.31□□□□□ -0.12
PBX1-213ENST00000558796 NIP7Q9Y221 180 aaKnown RBP eCLIP14.31□□□□□ -0.12
PBX1-213ENST00000558796 SLX4Q8IY92 1834 aa14.31□□□□□ -0.12
PBX1-213ENST00000558796 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
PBX1-213ENST00000558796 FAM177BA6PVY3 158 aa14.3□□□□□ -0.12
PBX1-213ENST00000558796 CCDC27Q2M243 656 aa14.3□□□□□ -0.12
PBX1-213ENST00000558796 NBPF5PQ86XG9 351 aaPredicted RBP14.3□□□□□ -0.12
PBX1-213ENST00000558796 TSR2Q969E8 191 aaKnown RBP14.3□□□□□ -0.12
PBX1-213ENST00000558796 CHPF2Q9P2E5 772 aa14.3□□□□□ -0.12
PBX1-213ENST00000558796 ELL2O00472 640 aaPredicted RBP14.29□□□□□ -0.12
PBX1-213ENST00000558796 HOXB7P09629 217 aa14.29□□□□□ -0.12
PBX1-213ENST00000558796 ST5P78524 1137 aa14.29□□□□□ -0.12
PBX1-213ENST00000558796 AIMP1Q12904 312 aaKnown RBP14.29□□□□□ -0.12
PBX1-213ENST00000558796 C2CD5Q86YS7 1000 aa14.29□□□□□ -0.12
PBX1-213ENST00000558796 PIM2Q9P1W9 311 aa14.29□□□□□ -0.12
PBX1-213ENST00000558796 FER1L6Q2WGJ9 1857 aa14.29□□□□□ -0.12
PBX1-213ENST00000558796 ERVV-1B6SEH8 477 aa14.28□□□□□ -0.12
PBX1-213ENST00000558796 RGL2O15211 777 aa14.28□□□□□ -0.12
PBX1-213ENST00000558796 GPTP24298 496 aa14.28□□□□□ -0.12
PBX1-213ENST00000558796 DALRD3Q5D0E6 543 aaKnown RBP14.28□□□□□ -0.12
PBX1-213ENST00000558796 TIAM2Q8IVF5 1701 aa14.28□□□□□ -0.12
PBX1-213ENST00000558796 XAGE3Q8WTP9 111 aa14.28□□□□□ -0.12
PBX1-213ENST00000558796 DDX21Q9NR30 783 aaKnown RBP eCLIP14.28□□□□□ -0.12
PBX1-213ENST00000558796 DDX60Q8IY21 1712 aaKnown RBP14.27□□□□□ -0.12
PBX1-213ENST00000558796 UBN2Q6ZU65 1347 aa14.27□□□□□ -0.12
PBX1-213ENST00000558796 COPS6Q7L5N1 327 aa14.27□□□□□ -0.13
PBX1-213ENST00000558796 C8orf58Q8NAV2 365 aa14.27□□□□□ -0.13
PBX1-213ENST00000558796 BRIP1Q9BX63 1249 aa14.27□□□□□ -0.13
PBX1-213ENST00000558796 ABCC12Q96J65 1359 aa14.26□□□□□ -0.13
PBX1-213ENST00000558796 DICER1Q9UPY3 1922 aaKnown RBP14.26□□□□□ -0.13
PBX1-213ENST00000558796 H0YIN7 160 aa14.26□□□□□ -0.13
PBX1-213ENST00000558796 PDE6BP35913 854 aa14.26□□□□□ -0.13
PBX1-213ENST00000558796 GIGYF2Q6Y7W6 1299 aaKnown RBP14.26□□□□□ -0.13
PBX1-213ENST00000558796 DBF4Q9UBU7 674 aaPredicted RBP14.26□□□□□ -0.13
PBX1-213ENST00000558796 TAF1P21675 1872 aa14.25□□□□□ -0.13
PBX1-213ENST00000558796 IL16Q14005 1332 aa14.25□□□□□ -0.13
PBX1-213ENST00000558796 ARHGAP27Q6ZUM4 889 aa14.25□□□□□ -0.13
PBX1-213ENST00000558796 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
PBX1-213ENST00000558796 TSPYL6Q8N831 410 aa14.25□□□□□ -0.13
PBX1-213ENST00000558796 IBTKQ9P2D0 1353 aaPredicted RBP14.24□□□□□ -0.13
PBX1-213ENST00000558796 FANCIQ9NVI1 1328 aa14.24□□□□□ -0.13
PBX1-213ENST00000558796 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
PBX1-213ENST00000558796 TPTE2Q6XPS3 522 aa14.24□□□□□ -0.13
PBX1-213ENST00000558796 ZNF622Q969S3 477 aaKnown RBP eCLIP14.24□□□□□ -0.13
PBX1-213ENST00000558796 GTF2E1P29083 439 aaPredicted RBP14.23□□□□□ -0.13
PBX1-213ENST00000558796 SUSD4Q5VX71 490 aa14.23□□□□□ -0.13
PBX1-213ENST00000558796 ZNF34Q8IZ26 560 aa14.23□□□□□ -0.13
PBX1-213ENST00000558796 TTLL6Q8N841 843 aa14.23□□□□□ -0.13
PBX1-213ENST00000558796 ZNF784Q8NCA9 323 aaPredicted RBP14.23□□□□□ -0.13
PBX1-213ENST00000558796 ADCY9O60503 1353 aa14.22□□□□□ -0.13
PBX1-213ENST00000558796 MYH3P11055 1940 aa14.22□□□□□ -0.13
PBX1-213ENST00000558796 NTSR2O95665 410 aa14.22□□□□□ -0.13
PBX1-213ENST00000558796 ERFEQ4G0M1 354 aa14.22□□□□□ -0.13
PBX1-213ENST00000558796 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
PBX1-213ENST00000558796 ZNF428Q96B54 188 aa14.22□□□□□ -0.13
PBX1-213ENST00000558796 NYXQ9GZU5 481 aa14.22□□□□□ -0.13
PBX1-213ENST00000558796 HYPKQ9NX55 129 aa14.22□□□□□ -0.13
PBX1-213ENST00000558796 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
PBX1-213ENST00000558796 TCERG1O14776 1098 aaKnown RBP14.21□□□□□ -0.13
PBX1-213ENST00000558796 SRGNP10124 158 aa14.21□□□□□ -0.13
PBX1-213ENST00000558796 TWISTNBQ3B726 338 aaPredicted RBP14.21□□□□□ -0.13
PBX1-213ENST00000558796 PLBD2Q8NHP8 589 aa14.21□□□□□ -0.13
PBX1-213ENST00000558796 PHAXQ9H814 394 aaKnown RBP14.21□□□□□ -0.13
PBX1-213ENST00000558796 SPINK5Q9NQ38 1064 aaPredicted RBP14.21□□□□□ -0.13
PBX1-213ENST00000558796 PDZRN3Q9UPQ7 1066 aa14.21□□□□□ -0.13
PBX1-213ENST00000558796 RIC1Q4ADV7 1423 aa14.21□□□□□ -0.13
PBX1-213ENST00000558796 CCER2I3L3R5 266 aa14.2□□□□□ -0.14
PBX1-213ENST00000558796 RASSF7Q02833 373 aa14.2□□□□□ -0.14
PBX1-213ENST00000558796 PARP10Q53GL7 1025 aa14.2□□□□□ -0.14
PBX1-213ENST00000558796 HSP90AB3PQ58FF7 597 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 428.2 ms