RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CCDC146Q8IYE0 955 aa11.58□□□□□ -0.56
SNRPA1-206ENST00000558059 NBPF15Q8N660 670 aa11.58□□□□□ -0.56
SNRPA1-206ENST00000558059 ZNF784Q8NCA9 323 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-206ENST00000558059 ZNF330Q9Y3S2 320 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-206ENST00000558059 SCN7AQ01118 1682 aa11.57□□□□□ -0.56
SNRPA1-206ENST00000558059 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
SNRPA1-206ENST00000558059 CAMTA2O94983 1202 aa11.57□□□□□ -0.56
SNRPA1-206ENST00000558059 SERPINB2P05120 415 aa11.57□□□□□ -0.56
SNRPA1-206ENST00000558059 EIF4A1P60842 406 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-206ENST00000558059 WDR43Q15061 677 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNRPA1-206ENST00000558059 LHX8Q68G74 356 aa11.57□□□□□ -0.56
SNRPA1-206ENST00000558059 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
SNRPA1-206ENST00000558059 RRP7AQ9Y3A4 280 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-206ENST00000558059 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-206ENST00000558059 TBC1D9BQ66K14 1250 aa11.56□□□□□ -0.56
SNRPA1-206ENST00000558059 BICDL1Q6ZP65 573 aa11.56□□□□□ -0.56
SNRPA1-206ENST00000558059 LAMB4A4D0S4 1761 aa11.56□□□□□ -0.56
SNRPA1-206ENST00000558059 BCORQ6W2J9 1755 aa11.55□□□□□ -0.56
SNRPA1-206ENST00000558059 CHRNA5P30532 468 aa11.55□□□□□ -0.56
SNRPA1-206ENST00000558059 LMOD3Q0VAK6 560 aa11.55□□□□□ -0.56
SNRPA1-206ENST00000558059 NEUROD2Q15784 382 aa11.55□□□□□ -0.56
SNRPA1-206ENST00000558059 DZIP3Q86Y13 1208 aaKnown RBP11.55□□□□□ -0.56
SNRPA1-206ENST00000558059 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
SNRPA1-206ENST00000558059 BCS1LQ9Y276 419 aa11.55□□□□□ -0.56
SNRPA1-206ENST00000558059 ARFGEF1Q9Y6D6 1849 aa11.55□□□□□ -0.56
SNRPA1-206ENST00000558059 CCDC184Q52MB2 194 aa11.54□□□□□ -0.56
SNRPA1-206ENST00000558059 NPM2Q86SE8 214 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-206ENST00000558059 BABAM1Q9NWV8 329 aa11.54□□□□□ -0.56
SNRPA1-206ENST00000558059 PIM2Q9P1W9 311 aa11.54□□□□□ -0.56
SNRPA1-206ENST00000558059 TSPYL4Q9UJ04 414 aa11.54□□□□□ -0.56
SNRPA1-206ENST00000558059 ANKRD31Q8N7Z5 1873 aa11.54□□□□□ -0.56
SNRPA1-206ENST00000558059 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
SNRPA1-206ENST00000558059 CLEC4GQ6UXB4 293 aa11.53□□□□□ -0.56
SNRPA1-206ENST00000558059 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
SNRPA1-206ENST00000558059 CARMIL3Q8ND23 1372 aa11.53□□□□□ -0.56
SNRPA1-206ENST00000558059 NUP98P52948 1817 aa11.52□□□□□ -0.57
SNRPA1-206ENST00000558059 CHL1O00533 1208 aa11.52□□□□□ -0.57
SNRPA1-206ENST00000558059 DALRD3Q5D0E6 543 aaKnown RBP11.52□□□□□ -0.57
SNRPA1-206ENST00000558059 PRR5LQ6MZQ0 368 aa11.52□□□□□ -0.57
SNRPA1-206ENST00000558059 SETDB2Q96T68 719 aa11.52□□□□□ -0.57
SNRPA1-206ENST00000558059 DLEC1Q9Y238 1755 aa11.51□□□□□ -0.57
SNRPA1-206ENST00000558059 RGL2O15211 777 aa11.51□□□□□ -0.57
SNRPA1-206ENST00000558059 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
SNRPA1-206ENST00000558059 HLFQ16534 295 aa11.51□□□□□ -0.57
SNRPA1-206ENST00000558059 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
SNRPA1-206ENST00000558059 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
SNRPA1-206ENST00000558059 ADCY9O60503 1353 aa11.51□□□□□ -0.57
SNRPA1-206ENST00000558059 APAF1O14727 1248 aa11.5□□□□□ -0.57
SNRPA1-206ENST00000558059 TTLL7Q6ZT98 887 aa11.5□□□□□ -0.57
SNRPA1-206ENST00000558059 C2CD5Q86YS7 1000 aa11.5□□□□□ -0.57
SNRPA1-206ENST00000558059 NGEFQ8N5V2 710 aa11.5□□□□□ -0.57
SNRPA1-206ENST00000558059 BRIP1Q9BX63 1249 aa11.5□□□□□ -0.57
SNRPA1-206ENST00000558059 ZNF652Q9Y2D9 606 aa11.5□□□□□ -0.57
SNRPA1-206ENST00000558059 SBF1O95248 1867 aa11.5□□□□□ -0.57
SNRPA1-206ENST00000558059 H0YIN7 160 aa11.49□□□□□ -0.57
SNRPA1-206ENST00000558059 MYL6BP14649 208 aa11.49□□□□□ -0.57
SNRPA1-206ENST00000558059 PDIA6Q15084 440 aa11.49□□□□□ -0.57
SNRPA1-206ENST00000558059 KRT24Q2M2I5 525 aa11.49□□□□□ -0.57
SNRPA1-206ENST00000558059 LRP10Q7Z4F1 713 aa11.49□□□□□ -0.57
SNRPA1-206ENST00000558059 CNBD1Q8NA66 436 aa11.49□□□□□ -0.57
SNRPA1-206ENST00000558059 ERBB4Q15303 1308 aa11.49□□□□□ -0.57
SNRPA1-206ENST00000558059 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
SNRPA1-206ENST00000558059 ERVV-1B6SEH8 477 aa11.48□□□□□ -0.57
SNRPA1-206ENST00000558059 EIF2S2P20042 333 aaKnown RBP11.48□□□□□ -0.57
SNRPA1-206ENST00000558059 PDE6BP35913 854 aa11.48□□□□□ -0.57
SNRPA1-206ENST00000558059 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
SNRPA1-206ENST00000558059 TTLL6Q8N841 843 aa11.48□□□□□ -0.57
SNRPA1-206ENST00000558059 PDZRN3Q9UPQ7 1066 aa11.48□□□□□ -0.57
SNRPA1-206ENST00000558059 NIP7Q9Y221 180 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNRPA1-206ENST00000558059 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
SNRPA1-206ENST00000558059 MAP3K15Q6ZN16 1313 aa11.48□□□□□ -0.57
SNRPA1-206ENST00000558059 COL11A2P13942 1736 aaPredicted RBP11.48□□□□□ -0.57
SNRPA1-206ENST00000558059 CCDC88AQ3V6T2 1871 aa11.47□□□□□ -0.57
SNRPA1-206ENST00000558059 ANXA1P04083 346 aa11.47□□□□□ -0.57
SNRPA1-206ENST00000558059 ZNF853P0CG23 659 aa11.47□□□□□ -0.57
SNRPA1-206ENST00000558059 NBPF5PQ86XG9 351 aaPredicted RBP11.47□□□□□ -0.57
SNRPA1-206ENST00000558059 CFAP44Q96MT7 982 aa11.47□□□□□ -0.57
SNRPA1-206ENST00000558059 SLX4Q8IY92 1834 aa11.46□□□□□ -0.57
SNRPA1-206ENST00000558059 ANP32CO43423 234 aa11.46□□□□□ -0.57
SNRPA1-206ENST00000558059 ST5P78524 1137 aa11.46□□□□□ -0.57
SNRPA1-206ENST00000558059 TPTE2Q6XPS3 522 aa11.46□□□□□ -0.57
SNRPA1-206ENST00000558059 KIF6Q6ZMV9 814 aa11.46□□□□□ -0.57
SNRPA1-206ENST00000558059 ZNF622Q969S3 477 aaKnown RBP eCLIP11.46□□□□□ -0.57
SNRPA1-206ENST00000558059 KLRG2A4D1S0 409 aaPredicted RBP11.45□□□□□ -0.58
SNRPA1-206ENST00000558059 NPHP1O15259 732 aa11.45□□□□□ -0.58
SNRPA1-206ENST00000558059 SRGNP10124 158 aa11.45□□□□□ -0.58
SNRPA1-206ENST00000558059 C9orf131Q5VYM1 1079 aa11.45□□□□□ -0.58
SNRPA1-206ENST00000558059 ZNF34Q8IZ26 560 aa11.45□□□□□ -0.58
SNRPA1-206ENST00000558059 NECTIN2Q92692 538 aa11.45□□□□□ -0.58
SNRPA1-206ENST00000558059 ZBTB3Q9H5J0 574 aa11.45□□□□□ -0.58
SNRPA1-206ENST00000558059 MBIPQ9NS73 344 aa11.45□□□□□ -0.58
SNRPA1-206ENST00000558059 CACNA1SQ13698 1873 aa11.44□□□□□ -0.58
SNRPA1-206ENST00000558059 FAM177BA6PVY3 158 aa11.44□□□□□ -0.58
SNRPA1-206ENST00000558059 STYK1Q6J9G0 422 aa11.44□□□□□ -0.58
SNRPA1-206ENST00000558059 GIGYF2Q6Y7W6 1299 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-206ENST00000558059 MRS2Q9HD23 443 aa11.44□□□□□ -0.58
SNRPA1-206ENST00000558059 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
SNRPA1-206ENST00000558059 IFT57Q9NWB7 429 aa11.44□□□□□ -0.58
SNRPA1-206ENST00000558059 FER1L6Q2WGJ9 1857 aa11.44□□□□□ -0.58
SNRPA1-206ENST00000558059 ARFGEF2Q9Y6D5 1785 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms