RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 BCS1LQ9Y276 419 aa20.65■□□□□ 0.9
TUBB3-214ENST00000557490 ERBB4Q15303 1308 aa20.64■□□□□ 0.89
TUBB3-214ENST00000557490 POLRMTO00411 1230 aaKnown RBP20.64■□□□□ 0.89
TUBB3-214ENST00000557490 CAMTA2O94983 1202 aa20.64■□□□□ 0.89
TUBB3-214ENST00000557490 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.89
TUBB3-214ENST00000557490 CCDC27Q2M243 656 aa20.64■□□□□ 0.89
TUBB3-214ENST00000557490 ARHGAP27Q6ZUM4 889 aa20.64■□□□□ 0.89
TUBB3-214ENST00000557490 BRCA1P38398 1863 aaKnown RBP20.63■□□□□ 0.89
TUBB3-214ENST00000557490 ZNF853P0CG23 659 aa20.63■□□□□ 0.89
TUBB3-214ENST00000557490 NCBP3Q53F19 620 aaKnown RBP20.63■□□□□ 0.89
TUBB3-214ENST00000557490 BICDL1Q6ZP65 573 aa20.63■□□□□ 0.89
TUBB3-214ENST00000557490 MBIPQ9NS73 344 aa20.63■□□□□ 0.89
TUBB3-214ENST00000557490 C10orf71Q711Q0 1435 aa20.62■□□□□ 0.89
TUBB3-214ENST00000557490 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
TUBB3-214ENST00000557490 NGEFQ8N5V2 710 aa20.62■□□□□ 0.89
TUBB3-214ENST00000557490 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
TUBB3-214ENST00000557490 TNRC6CQ9HCJ0 1690 aaKnown RBP20.61■□□□□ 0.89
TUBB3-214ENST00000557490 MYL6BP14649 208 aa20.61■□□□□ 0.89
TUBB3-214ENST00000557490 TBC1D9BQ66K14 1250 aa20.61■□□□□ 0.89
TUBB3-214ENST00000557490 WWC1Q8IX03 1113 aa20.61■□□□□ 0.89
TUBB3-214ENST00000557490 SERPINB2P05120 415 aa20.6■□□□□ 0.89
TUBB3-214ENST00000557490 HOXB7P09629 217 aa20.6■□□□□ 0.89
TUBB3-214ENST00000557490 TGFB2P61812 414 aa20.6■□□□□ 0.89
TUBB3-214ENST00000557490 KRT24Q2M2I5 525 aa20.6■□□□□ 0.89
TUBB3-214ENST00000557490 C9orf131Q5VYM1 1079 aa20.6■□□□□ 0.89
TUBB3-214ENST00000557490 CLEC4GQ6UXB4 293 aa20.6■□□□□ 0.89
TUBB3-214ENST00000557490 A0A0G2JLW4 131 aa20.59■□□□□ 0.89
TUBB3-214ENST00000557490 KIF6Q6ZMV9 814 aa20.59■□□□□ 0.89
TUBB3-214ENST00000557490 NECTIN2Q92692 538 aa20.59■□□□□ 0.89
TUBB3-214ENST00000557490 SETDB2Q96T68 719 aa20.59■□□□□ 0.89
TUBB3-214ENST00000557490 SALL2Q9Y467 1007 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-214ENST00000557490 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
TUBB3-214ENST00000557490 ARFGEF1Q9Y6D6 1849 aa20.58■□□□□ 0.89
TUBB3-214ENST00000557490 CCER2I3L3R5 266 aa20.58■□□□□ 0.89
TUBB3-214ENST00000557490 RGL2O15211 777 aa20.58■□□□□ 0.89
TUBB3-214ENST00000557490 DUSP27Q5VZP5 1158 aa20.58■□□□□ 0.89
TUBB3-214ENST00000557490 SCN7AQ01118 1682 aa20.58■□□□□ 0.88
TUBB3-214ENST00000557490 HDGFL1Q5TGJ6 251 aa20.57■□□□□ 0.88
TUBB3-214ENST00000557490 SMC1BQ8NDV3 1235 aa20.57■□□□□ 0.88
TUBB3-214ENST00000557490 CARMIL3Q8ND23 1372 aa20.57■□□□□ 0.88
TUBB3-214ENST00000557490 PDIA6Q15084 440 aa20.56■□□□□ 0.88
TUBB3-214ENST00000557490 DIEXFQ68CQ4 756 aaKnown RBP20.56■□□□□ 0.88
TUBB3-214ENST00000557490 RRAGCQ9HB90 399 aa20.56■□□□□ 0.88
TUBB3-214ENST00000557490 IL16Q14005 1332 aa20.55■□□□□ 0.88
TUBB3-214ENST00000557490 MAP3K15Q6ZN16 1313 aa20.55■□□□□ 0.88
TUBB3-214ENST00000557490 ERVV-1B6SEH8 477 aa20.55■□□□□ 0.88
TUBB3-214ENST00000557490 NPHP1O15259 732 aa20.55■□□□□ 0.88
TUBB3-214ENST00000557490 DPEP1P16444 411 aa20.55■□□□□ 0.88
TUBB3-214ENST00000557490 TTLL7Q6ZT98 887 aa20.55■□□□□ 0.88
TUBB3-214ENST00000557490 DDX21Q9NR30 783 aaKnown RBP eCLIP20.55■□□□□ 0.88
TUBB3-214ENST00000557490 ANXA1P04083 346 aa20.54■□□□□ 0.88
TUBB3-214ENST00000557490 PROSER3Q2NL68 480 aa20.54■□□□□ 0.88
TUBB3-214ENST00000557490 WDR63Q8IWG1 891 aa20.54■□□□□ 0.88
TUBB3-214ENST00000557490 NIP7Q9Y221 180 aaKnown RBP eCLIP20.54■□□□□ 0.88
TUBB3-214ENST00000557490 HLFQ16534 295 aa20.53■□□□□ 0.88
TUBB3-214ENST00000557490 CHPF2Q9P2E5 772 aa20.53■□□□□ 0.88
TUBB3-214ENST00000557490 BCORQ6W2J9 1755 aa20.52■□□□□ 0.88
TUBB3-214ENST00000557490 ELL2O00472 640 aaPredicted RBP20.52■□□□□ 0.88
TUBB3-214ENST00000557490 LRP10Q7Z4F1 713 aa20.52■□□□□ 0.88
TUBB3-214ENST00000557490 NBPF5PQ86XG9 351 aaPredicted RBP20.52■□□□□ 0.88
TUBB3-214ENST00000557490 CNBD1Q8NA66 436 aa20.52■□□□□ 0.88
TUBB3-214ENST00000557490 TSR2Q969E8 191 aaKnown RBP20.52■□□□□ 0.88
TUBB3-214ENST00000557490 CHMP4AQ9BY43 222 aa20.52■□□□□ 0.88
TUBB3-214ENST00000557490 ZBTB3Q9H5J0 574 aa20.52■□□□□ 0.88
TUBB3-214ENST00000557490 DBF4Q9UBU7 674 aaPredicted RBP20.52■□□□□ 0.88
TUBB3-214ENST00000557490 SBF1O95248 1867 aa20.52■□□□□ 0.87
TUBB3-214ENST00000557490 ST5P78524 1137 aa20.51■□□□□ 0.87
TUBB3-214ENST00000557490 PRR5LQ6MZQ0 368 aa20.51■□□□□ 0.87
TUBB3-214ENST00000557490 C8orf58Q8NAV2 365 aa20.51■□□□□ 0.87
TUBB3-214ENST00000557490 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
TUBB3-214ENST00000557490 CHRNA5P30532 468 aa20.5■□□□□ 0.87
TUBB3-214ENST00000557490 AIMP1Q12904 312 aaKnown RBP20.5■□□□□ 0.87
TUBB3-214ENST00000557490 COPS6Q7L5N1 327 aa20.5■□□□□ 0.87
TUBB3-214ENST00000557490 XAGE3Q8WTP9 111 aa20.5■□□□□ 0.87
TUBB3-214ENST00000557490 PIM2Q9P1W9 311 aa20.5■□□□□ 0.87
TUBB3-214ENST00000557490 TPTE2Q6XPS3 522 aa20.49■□□□□ 0.87
TUBB3-214ENST00000557490 BRIP1Q9BX63 1249 aa20.49■□□□□ 0.87
TUBB3-214ENST00000557490 HYPKQ9NX55 129 aa20.49■□□□□ 0.87
TUBB3-214ENST00000557490 PCDH10Q9P2E7 1040 aa20.49■□□□□ 0.87
TUBB3-214ENST00000557490 NRXN2Q9P2S2 1712 aa20.49■□□□□ 0.87
TUBB3-214ENST00000557490 KCNA3P22001 575 aa20.48■□□□□ 0.87
TUBB3-214ENST00000557490 PDE6BP35913 854 aa20.48■□□□□ 0.87
TUBB3-214ENST00000557490 GIGYF2Q6Y7W6 1299 aaKnown RBP20.48■□□□□ 0.87
TUBB3-214ENST00000557490 C2CD5Q86YS7 1000 aa20.48■□□□□ 0.87
TUBB3-214ENST00000557490 CCDC24Q8N4L8 307 aa20.48■□□□□ 0.87
TUBB3-214ENST00000557490 PDZRN3Q9UPQ7 1066 aa20.48■□□□□ 0.87
TUBB3-214ENST00000557490 FAM177BA6PVY3 158 aa20.47■□□□□ 0.87
TUBB3-214ENST00000557490 H0YIN7 160 aa20.47■□□□□ 0.87
TUBB3-214ENST00000557490 CCDC30Q5VVM6 783 aa20.47■□□□□ 0.87
TUBB3-214ENST00000557490 AFDNP55196 1824 aaKnown RBP20.47■□□□□ 0.87
TUBB3-214ENST00000557490 GPTP24298 496 aa20.46■□□□□ 0.87
TUBB3-214ENST00000557490 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
TUBB3-214ENST00000557490 DALRD3Q5D0E6 543 aaKnown RBP20.46■□□□□ 0.87
TUBB3-214ENST00000557490 TSPYL6Q8N831 410 aa20.46■□□□□ 0.87
TUBB3-214ENST00000557490 NYXQ9GZU5 481 aa20.46■□□□□ 0.87
TUBB3-214ENST00000557490 FANCIQ9NVI1 1328 aa20.46■□□□□ 0.87
TUBB3-214ENST00000557490 GOLGA2Q08379 1002 aa20.45■□□□□ 0.86
TUBB3-214ENST00000557490 TWISTNBQ3B726 338 aaPredicted RBP20.45■□□□□ 0.86
TUBB3-214ENST00000557490 HSP90AB3PQ58FF7 597 aa20.45■□□□□ 0.86
TUBB3-214ENST00000557490 ZNF34Q8IZ26 560 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms