RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 CTAGE5O15320 804 aa9.71□□□□□ -0.85
CHD8-213ENST00000557364 CCDC172P0C7W6 258 aa9.71□□□□□ -0.85
CHD8-213ENST00000557364 CALML4Q96GE6 196 aa9.71□□□□□ -0.85
CHD8-213ENST00000557364 ANKRD62A6NC57 917 aa9.71□□□□□ -0.85
CHD8-213ENST00000557364 EIF5P55010 431 aaKnown RBP9.71□□□□□ -0.85
CHD8-213ENST00000557364 MAP7D2Q96T17 732 aa9.71□□□□□ -0.85
CHD8-213ENST00000557364 TCP11L1Q9NUJ3 509 aa9.71□□□□□ -0.85
CHD8-213ENST00000557364 PARP3Q9Y6F1 533 aa9.71□□□□□ -0.85
CHD8-213ENST00000557364 ANAPC15P60006 121 aa9.71□□□□□ -0.85
CHD8-213ENST00000557364 KIF2AO00139 706 aaPredicted RBP9.71□□□□□ -0.86
CHD8-213ENST00000557364 KANK3Q6NY19 840 aa9.71□□□□□ -0.86
CHD8-213ENST00000557364 SSRP1Q08945 709 aaKnown RBP9.71□□□□□ -0.86
CHD8-213ENST00000557364 CNNM2Q9H8M5 875 aa9.71□□□□□ -0.86
CHD8-213ENST00000557364 LMTK3Q96Q04 1460 aa9.71□□□□□ -0.86
CHD8-213ENST00000557364 UHRF1BP1Q6BDS2 1440 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 TPTE2Q6XPS3 522 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 LDHAL6AQ6ZMR3 332 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 FAM114A1Q8IWE2 563 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 PPIP5K1Q6PFW1 1433 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 RIMS2Q9UQ26 1411 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 EIF3JO75822 258 aaKnown RBP9.7□□□□□ -0.86
CHD8-213ENST00000557364 DDX12PQ92771 950 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 C1orf115Q9H7X2 142 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 SEPT11Q9NVA2 429 aaKnown RBP9.7□□□□□ -0.86
CHD8-213ENST00000557364 RANBP6O60518 1105 aaKnown RBP9.7□□□□□ -0.86
CHD8-213ENST00000557364 CCDC91Q7Z6B0 441 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 ANKRD2Q9GZV1 360 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 KAT14Q9H8E8 782 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 RTCBQ9Y3I0 505 aaKnown RBP9.7□□□□□ -0.86
CHD8-213ENST00000557364 MCM3P25205 808 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 CCDC148Q8NFR7 591 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 KRT23Q9C075 422 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 SH2D4AQ9H788 454 aa9.7□□□□□ -0.86
CHD8-213ENST00000557364 BCAR3O75815 825 aa9.69□□□□□ -0.86
CHD8-213ENST00000557364 FAM43AQ8N2R8 423 aa9.69□□□□□ -0.86
CHD8-213ENST00000557364 IL2RBP14784 551 aa9.69□□□□□ -0.86
CHD8-213ENST00000557364 C8orf76Q96K31 380 aa9.69□□□□□ -0.86
CHD8-213ENST00000557364 GNAT2P19087 354 aa9.69□□□□□ -0.86
CHD8-213ENST00000557364 NBPF7P0C2Y1 421 aaPredicted RBP9.69□□□□□ -0.86
CHD8-213ENST00000557364 CASTP20810 708 aaKnown RBP9.69□□□□□ -0.86
CHD8-213ENST00000557364 UTP14AQ9BVJ6 771 aaKnown RBP9.69□□□□□ -0.86
CHD8-213ENST00000557364 ATP6V1AP38606 617 aa9.69□□□□□ -0.86
CHD8-213ENST00000557364 SPA17Q15506 151 aa9.69□□□□□ -0.86
CHD8-213ENST00000557364 UPF3BQ9BZI7 483 aaKnown RBP9.69□□□□□ -0.86
CHD8-213ENST00000557364 NUP62CLQ9H1M0 184 aa9.69□□□□□ -0.86
CHD8-213ENST00000557364 RPRD2Q5VT52 1461 aaKnown RBP9.68□□□□□ -0.86
CHD8-213ENST00000557364 MFSD6Q6ZSS7 791 aa9.68□□□□□ -0.86
CHD8-213ENST00000557364 CCDC112Q8NEF3 446 aa9.68□□□□□ -0.86
CHD8-213ENST00000557364 STK3Q13188 491 aa9.68□□□□□ -0.86
CHD8-213ENST00000557364 ACEP12821 1306 aa9.68□□□□□ -0.86
CHD8-213ENST00000557364 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
CHD8-213ENST00000557364 IFIT3O14879 490 aaKnown RBP9.68□□□□□ -0.86
CHD8-213ENST00000557364 CAVIN2O95810 425 aa9.68□□□□□ -0.86
CHD8-213ENST00000557364 FLIIQ13045 1269 aa9.68□□□□□ -0.86
CHD8-213ENST00000557364 MCM10Q7L590 875 aa9.68□□□□□ -0.86
CHD8-213ENST00000557364 CCDC97Q96F63 343 aaPredicted RBP9.68□□□□□ -0.86
CHD8-213ENST00000557364 PABPN1LA6NDY0 278 aaKnown RBP9.67□□□□□ -0.86
CHD8-213ENST00000557364 PDE6BP35913 854 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 CEBPZQ03701 1054 aaKnown RBP9.67□□□□□ -0.86
CHD8-213ENST00000557364 SLFN5Q08AF3 891 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 KIAA1328Q86T90 577 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 NME9Q86XW9 330 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 PCDH11XQ9BZA7 1347 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 PCDH11YQ9BZA8 1340 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 NLRP5P59047 1200 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 ZNF771Q7L3S4 317 aaPredicted RBP9.67□□□□□ -0.86
CHD8-213ENST00000557364 CCDC83Q8IWF9 413 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 STK32BQ9NY57 414 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 TSPY2A6NKD2 308 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 PIBF1Q8WXW3 757 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 C8orf37Q96NL8 207 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 TAOK3Q9H2K8 898 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 FBXO3Q9UK99 471 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 ZFYVE9O95405 1425 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 AKAP4Q5JQC9 854 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 ANKRD13DQ6ZTN6 518 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 TTLL5Q6EMB2 1281 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 FMNL3Q8IVF7 1028 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 GBP3Q9H0R5 595 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 ECHDC1Q9NTX5 307 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 ARHGEF10O15013 1369 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 STK11IPQ8N1F8 1099 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 TNPO1Q92973 898 aaKnown RBP9.67□□□□□ -0.86
CHD8-213ENST00000557364 PLVAPQ9BX97 442 aa9.67□□□□□ -0.86
CHD8-213ENST00000557364 ZC3H12CQ9C0D7 883 aaKnown RBP9.67□□□□□ -0.86
CHD8-213ENST00000557364 BRDTQ58F21 947 aaPredicted RBP9.66□□□□□ -0.86
CHD8-213ENST00000557364 CLEC11AQ9Y240 323 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 PATL2C9JE40 543 aaKnown RBP9.66□□□□□ -0.86
CHD8-213ENST00000557364 PRPF40AO75400 957 aaKnown RBP9.66□□□□□ -0.86
CHD8-213ENST00000557364 ALDH1L1O75891 902 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 CACNA2D4Q7Z3S7 1137 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 MAST3O60307 1309 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 TRAK2O60296 914 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 KDM4AO75164 1064 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 CCDC174Q6PII3 467 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 HOOK3Q86VS8 718 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 CCDC85AQ96PX6 553 aaPredicted RBP9.66□□□□□ -0.86
CHD8-213ENST00000557364 BEGAINQ9BUH8 593 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 ENOX2Q16206 610 aaKnown RBP9.66□□□□□ -0.86
CHD8-213ENST00000557364 FBXO31Q5XUX0 539 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms