RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	LY75	O60449	1722 aa		11.52	□□□□□ -0.57
PRKCH-222	ENST00000556778	SCN11A	Q9UI33	1791 aa		11.51	□□□□□ -0.57
PRKCH-222	ENST00000556778	ELL2	O00472	640 aa	Predicted RBP	11.51	□□□□□ -0.57
PRKCH-222	ENST00000556778	STARD3NL	O95772	234 aa		11.51	□□□□□ -0.57
PRKCH-222	ENST00000556778	C7	P10643	843 aa		11.51	□□□□□ -0.57
PRKCH-222	ENST00000556778	SSFA2	P28290	1259 aa		11.51	□□□□□ -0.57
PRKCH-222	ENST00000556778	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.51	□□□□□ -0.57
PRKCH-222	ENST00000556778	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.51	□□□□□ -0.57
PRKCH-222	ENST00000556778	RGPD4	Q7Z3J3	1758 aa		11.51	□□□□□ -0.57
PRKCH-222	ENST00000556778	EIF2S2	P20042	333 aa	Known RBP	11.5	□□□□□ -0.57
PRKCH-222	ENST00000556778	CCDC27	Q2M243	656 aa		11.5	□□□□□ -0.57
PRKCH-222	ENST00000556778	NGEF	Q8N5V2	710 aa		11.5	□□□□□ -0.57
PRKCH-222	ENST00000556778	C8orf58	Q8NAV2	365 aa		11.5	□□□□□ -0.57
PRKCH-222	ENST00000556778	MTFR1L	Q9H019	292 aa		11.5	□□□□□ -0.57
PRKCH-222	ENST00000556778	SPON1	Q9HCB6	807 aa		11.5	□□□□□ -0.57
PRKCH-222	ENST00000556778	SOS1	Q07889	1333 aa	Predicted RBP	11.5	□□□□□ -0.57
PRKCH-222	ENST00000556778	POTEF	A5A3E0	1075 aa		11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	ANXA1	P04083	346 aa		11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	RFC4	P35249	363 aa		11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	EIF5	P55010	431 aa	Known RBP	11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	TSPYL6	Q8N831	410 aa		11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	ARX	Q96QS3	562 aa		11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	BCL2L12	Q9HB09	334 aa		11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	IFT57	Q9NWB7	429 aa		11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	TBC1D2B	Q9UPU7	963 aa		11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	C4B	P0C0L5	1744 aa		11.49	□□□□□ -0.57
PRKCH-222	ENST00000556778	GYS1	P13807	737 aa		11.48	□□□□□ -0.57
PRKCH-222	ENST00000556778	MYL6B	P14649	208 aa		11.48	□□□□□ -0.57
PRKCH-222	ENST00000556778	PDIA6	Q15084	440 aa		11.48	□□□□□ -0.57
PRKCH-222	ENST00000556778	PROSER3	Q2NL68	480 aa		11.48	□□□□□ -0.57
PRKCH-222	ENST00000556778	IER5L	Q5T953	404 aa		11.48	□□□□□ -0.57
PRKCH-222	ENST00000556778	USPL1	Q5W0Q7	1092 aa		11.48	□□□□□ -0.57
PRKCH-222	ENST00000556778	FLAD1	Q8NFF5	587 aa		11.48	□□□□□ -0.57
PRKCH-222	ENST00000556778	BABAM1	Q9NWV8	329 aa		11.48	□□□□□ -0.57
PRKCH-222	ENST00000556778	KAT6B	Q8WYB5	2073 aa		11.48	□□□□□ -0.57
PRKCH-222	ENST00000556778	TCERG1	O14776	1098 aa	Known RBP	11.47	□□□□□ -0.57
PRKCH-222	ENST00000556778	GNAI1	P63096	354 aa		11.47	□□□□□ -0.57
PRKCH-222	ENST00000556778	DUSP27	Q5VZP5	1158 aa		11.47	□□□□□ -0.57
PRKCH-222	ENST00000556778	SLC16A10	Q8TF71	515 aa		11.47	□□□□□ -0.57
PRKCH-222	ENST00000556778	CDCA7L	Q96GN5	454 aa		11.47	□□□□□ -0.57
PRKCH-222	ENST00000556778	C5	P01031	1676 aa		11.46	□□□□□ -0.57
PRKCH-222	ENST00000556778	ZNF521	Q96K83	1311 aa		11.46	□□□□□ -0.57
PRKCH-222	ENST00000556778	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.46	□□□□□ -0.57
PRKCH-222	ENST00000556778	POTEB2	H3BUK9	544 aa		11.46	□□□□□ -0.57
PRKCH-222	ENST00000556778	IL6ST	P40189	918 aa	Predicted RBP	11.46	□□□□□ -0.57
PRKCH-222	ENST00000556778	WDR63	Q8IWG1	891 aa		11.46	□□□□□ -0.57
PRKCH-222	ENST00000556778	ZFP91	Q96JP5	570 aa	Predicted RBP	11.46	□□□□□ -0.57
PRKCH-222	ENST00000556778	TJP1	Q07157	1748 aa		11.46	□□□□□ -0.58
PRKCH-222	ENST00000556778	USP42	Q9H9J4	1324 aa	Known RBP	11.45	□□□□□ -0.58
PRKCH-222	ENST00000556778	HMGB2	P26583	209 aa	Known RBP	11.45	□□□□□ -0.58
PRKCH-222	ENST00000556778	CALD1	Q05682	793 aa	Known RBP	11.45	□□□□□ -0.58
PRKCH-222	ENST00000556778	LHX8	Q68G74	356 aa		11.45	□□□□□ -0.58
PRKCH-222	ENST00000556778	TTLL7	Q6ZT98	887 aa		11.45	□□□□□ -0.58
PRKCH-222	ENST00000556778	LRP10	Q7Z4F1	713 aa		11.45	□□□□□ -0.58
PRKCH-222	ENST00000556778	NARF	Q9UHQ1	456 aa		11.45	□□□□□ -0.58
PRKCH-222	ENST00000556778	COLQ	Q9Y215	455 aa	Predicted RBP	11.45	□□□□□ -0.58
PRKCH-222	ENST00000556778	SIPA1L3	O60292	1781 aa	Predicted RBP	11.45	□□□□□ -0.58
PRKCH-222	ENST00000556778	COL15A1	P39059	1388 aa		11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	FANCI	Q9NVI1	1328 aa		11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	ZPR1	O75312	459 aa		11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	MMP10	P09238	476 aa		11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	EXOSC9	Q06265	439 aa	Known RBP	11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	DDR1	Q08345	913 aa		11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	HLF	Q16534	295 aa		11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	BICDL1	Q6ZP65	573 aa		11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	DZIP3	Q86Y13	1208 aa	Known RBP	11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	CHPF2	Q9P2E5	772 aa		11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	CASZ1	Q86V15	1759 aa		11.44	□□□□□ -0.58
PRKCH-222	ENST00000556778	IL16	Q14005	1332 aa		11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	CAMTA2	O94983	1202 aa		11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	POLD1	P28340	1107 aa		11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	TM4SF1	P30408	202 aa		11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	NFIX	Q14938	502 aa		11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	HDGFL1	Q5TGJ6	251 aa		11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	TBC1D9B	Q66K14	1250 aa		11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	NLGN1	Q8N2Q7	840 aa		11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	ZNF428	Q96B54	188 aa		11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	DLG5	Q8TDM6	1919 aa		11.43	□□□□□ -0.58
PRKCH-222	ENST00000556778	UBR2	Q8IWV8	1755 aa		11.42	□□□□□ -0.58
PRKCH-222	ENST00000556778	IRX5	P78411	483 aa	Predicted RBP	11.42	□□□□□ -0.58
PRKCH-222	ENST00000556778	AIMP1	Q12904	312 aa	Known RBP	11.42	□□□□□ -0.58
PRKCH-222	ENST00000556778	COPS6	Q7L5N1	327 aa		11.42	□□□□□ -0.58
PRKCH-222	ENST00000556778	CCDC24	Q8N4L8	307 aa		11.42	□□□□□ -0.58
PRKCH-222	ENST00000556778	NLGN2	Q8NFZ4	835 aa		11.42	□□□□□ -0.58
PRKCH-222	ENST00000556778	ZBTB3	Q9H5J0	574 aa		11.42	□□□□□ -0.58
PRKCH-222	ENST00000556778		A0A087WZG4	1122 aa		11.41	□□□□□ -0.58
PRKCH-222	ENST00000556778	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
PRKCH-222	ENST00000556778	GOLGA2	Q08379	1002 aa		11.41	□□□□□ -0.58
PRKCH-222	ENST00000556778	TWISTNB	Q3B726	338 aa	Predicted RBP	11.41	□□□□□ -0.58
PRKCH-222	ENST00000556778	XAGE3	Q8WTP9	111 aa		11.41	□□□□□ -0.58
PRKCH-222	ENST00000556778	SYT17	Q9BSW7	474 aa		11.41	□□□□□ -0.58
PRKCH-222	ENST00000556778	PHAX	Q9H814	394 aa	Known RBP	11.41	□□□□□ -0.58
PRKCH-222	ENST00000556778	COL5A3	P25940	1745 aa	Predicted RBP	11.4	□□□□□ -0.58
PRKCH-222	ENST00000556778	ZNF831	Q5JPB2	1677 aa		11.4	□□□□□ -0.58
PRKCH-222	ENST00000556778	TAF1L	Q8IZX4	1826 aa		11.4	□□□□□ -0.58
PRKCH-222	ENST00000556778	POLRMT	O00411	1230 aa	Known RBP	11.4	□□□□□ -0.58
PRKCH-222	ENST00000556778	VAMP4	O75379	141 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms