RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 STK32BQ9NY57 414 aa14.35□□□□□ -0.11
FOXN3-212ENST00000556541 NARFQ9UHQ1 456 aa14.35□□□□□ -0.11
FOXN3-212ENST00000556541 ABCC4O15439 1325 aa14.35□□□□□ -0.11
FOXN3-212ENST00000556541 ADCY9O60503 1353 aa14.34□□□□□ -0.11
FOXN3-212ENST00000556541 CASZ1Q86V15 1759 aa14.34□□□□□ -0.11
FOXN3-212ENST00000556541 RRP1P56182 461 aaKnown RBP14.34□□□□□ -0.11
FOXN3-212ENST00000556541 TRAPPC3LQ5T215 181 aa14.34□□□□□ -0.11
FOXN3-212ENST00000556541 KIF6Q6ZMV9 814 aa14.34□□□□□ -0.11
FOXN3-212ENST00000556541 ANKRD13DQ6ZTN6 518 aa14.34□□□□□ -0.11
FOXN3-212ENST00000556541 DZIP3Q86Y13 1208 aaKnown RBP14.34□□□□□ -0.11
FOXN3-212ENST00000556541 BCL2L13Q9BXK5 485 aa14.34□□□□□ -0.11
FOXN3-212ENST00000556541 NOB1Q9ULX3 412 aaKnown RBP14.34□□□□□ -0.11
FOXN3-212ENST00000556541 USP42Q9H9J4 1324 aaKnown RBP14.34□□□□□ -0.11
FOXN3-212ENST00000556541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.33□□□□□ -0.12
FOXN3-212ENST00000556541 CAMTA2O94983 1202 aa14.33□□□□□ -0.12
FOXN3-212ENST00000556541 ANXA1P04083 346 aa14.33□□□□□ -0.12
FOXN3-212ENST00000556541 TRIM27P14373 513 aa14.33□□□□□ -0.12
FOXN3-212ENST00000556541 TRIM28Q13263 835 aaKnown RBP14.33□□□□□ -0.12
FOXN3-212ENST00000556541 FKBP5Q13451 457 aaPredicted RBP14.33□□□□□ -0.12
FOXN3-212ENST00000556541 HSP90AB3PQ58FF7 597 aa14.33□□□□□ -0.12
FOXN3-212ENST00000556541 GIGYF2Q6Y7W6 1299 aaKnown RBP14.33□□□□□ -0.12
FOXN3-212ENST00000556541 ANO8Q9HCE9 1232 aaPredicted RBP14.33□□□□□ -0.12
FOXN3-212ENST00000556541 AFDNP55196 1824 aaKnown RBP14.32□□□□□ -0.12
FOXN3-212ENST00000556541 TCERG1O14776 1098 aaKnown RBP14.32□□□□□ -0.12
FOXN3-212ENST00000556541 TTLL7Q6ZT98 887 aa14.32□□□□□ -0.12
FOXN3-212ENST00000556541 DNAAF4Q8WXU2 420 aa14.32□□□□□ -0.12
FOXN3-212ENST00000556541 ARHGEF1Q92888 912 aaKnown RBP14.32□□□□□ -0.12
FOXN3-212ENST00000556541 METTL22Q9BUU2 404 aaPredicted RBP14.32□□□□□ -0.12
FOXN3-212ENST00000556541 TFCP2L1Q9NZI6 479 aa14.32□□□□□ -0.12
FOXN3-212ENST00000556541 ZNF652Q9Y2D9 606 aa14.32□□□□□ -0.12
FOXN3-212ENST00000556541 PNPLA7Q6ZV29 1317 aa14.32□□□□□ -0.12
FOXN3-212ENST00000556541 PI4KAP2A4QPH2 592 aa14.31□□□□□ -0.12
FOXN3-212ENST00000556541 PIP4K2AP48426 406 aaPredicted RBP14.31□□□□□ -0.12
FOXN3-212ENST00000556541 INTS3Q68E01 1043 aaKnown RBP14.31□□□□□ -0.12
FOXN3-212ENST00000556541 PI4KAP1Q8N8J0 262 aa14.31□□□□□ -0.12
FOXN3-212ENST00000556541 SLC16A10Q8TF71 515 aa14.31□□□□□ -0.12
FOXN3-212ENST00000556541 ALDH1L1O75891 902 aa14.3□□□□□ -0.12
FOXN3-212ENST00000556541 RFC4P35249 363 aa14.3□□□□□ -0.12
FOXN3-212ENST00000556541 CCT4P50991 539 aaKnown RBP14.3□□□□□ -0.12
FOXN3-212ENST00000556541 AMIGO3Q86WK7 504 aa14.3□□□□□ -0.12
FOXN3-212ENST00000556541 DZIP1LQ8IYY4 767 aaKnown RBP14.3□□□□□ -0.12
FOXN3-212ENST00000556541 NRXN2Q9P2S2 1712 aa14.29□□□□□ -0.12
FOXN3-212ENST00000556541 ZPR1O75312 459 aa14.29□□□□□ -0.12
FOXN3-212ENST00000556541 NEXNQ0ZGT2 675 aa14.29□□□□□ -0.12
FOXN3-212ENST00000556541 AIMP1Q12904 312 aaKnown RBP14.29□□□□□ -0.12
FOXN3-212ENST00000556541 TCIRG1Q13488 830 aa14.29□□□□□ -0.12
FOXN3-212ENST00000556541 RIC3Q7Z5B4 369 aa14.29□□□□□ -0.12
FOXN3-212ENST00000556541 LINS1Q8NG48 757 aa14.29□□□□□ -0.12
FOXN3-212ENST00000556541 ISCA1Q9BUE6 129 aa14.29□□□□□ -0.12
FOXN3-212ENST00000556541 MAP3K2Q9Y2U5 619 aa14.29□□□□□ -0.12
FOXN3-212ENST00000556541 LAMB2P55268 1798 aa14.28□□□□□ -0.12
FOXN3-212ENST00000556541 AAMPQ13685 434 aa14.28□□□□□ -0.12
FOXN3-212ENST00000556541 PARP10Q53GL7 1025 aa14.28□□□□□ -0.12
FOXN3-212ENST00000556541 BEND3Q5T5X7 828 aa14.28□□□□□ -0.12
FOXN3-212ENST00000556541 COL23A1Q86Y22 540 aaPredicted RBP14.28□□□□□ -0.12
FOXN3-212ENST00000556541 ZNF34Q8IZ26 560 aa14.28□□□□□ -0.12
FOXN3-212ENST00000556541 FRAT1Q92837 279 aaPredicted RBP14.28□□□□□ -0.12
FOXN3-212ENST00000556541 BCL2L12Q9HB09 334 aa14.28□□□□□ -0.12
FOXN3-212ENST00000556541 TBC1D2BQ9UPU7 963 aa14.28□□□□□ -0.12
FOXN3-212ENST00000556541 GYS1P13807 737 aa14.27□□□□□ -0.13
FOXN3-212ENST00000556541 NLGN1Q8N2Q7 840 aa14.27□□□□□ -0.13
FOXN3-212ENST00000556541 CCDC191Q8NCU4 936 aa14.27□□□□□ -0.13
FOXN3-212ENST00000556541 CHMP4BQ9H444 224 aaKnown RBP14.27□□□□□ -0.13
FOXN3-212ENST00000556541 SUPT16HQ9Y5B9 1047 aaKnown RBP14.27□□□□□ -0.13
FOXN3-212ENST00000556541 RIC1Q4ADV7 1423 aa14.26□□□□□ -0.13
FOXN3-212ENST00000556541 UTYO14607 1347 aa14.26□□□□□ -0.13
FOXN3-212ENST00000556541 HLFQ16534 295 aa14.26□□□□□ -0.13
FOXN3-212ENST00000556541 USPL1Q5W0Q7 1092 aa14.26□□□□□ -0.13
FOXN3-212ENST00000556541 FTSJ3Q8IY81 847 aaKnown RBP14.26□□□□□ -0.13
FOXN3-212ENST00000556541 SRCIN1Q9C0H9 1055 aa14.26□□□□□ -0.13
FOXN3-212ENST00000556541 ZBTB3Q9H5J0 574 aa14.26□□□□□ -0.13
FOXN3-212ENST00000556541 ZNF330Q9Y3S2 320 aaPredicted RBP14.26□□□□□ -0.13
FOXN3-212ENST00000556541 NEURL1BA8MQ27 555 aa14.25□□□□□ -0.13
FOXN3-212ENST00000556541 F6X3S4 739 aa14.25□□□□□ -0.13
FOXN3-212ENST00000556541 PHF14O94880 888 aa14.25□□□□□ -0.13
FOXN3-212ENST00000556541 IGKV5-2P06315 115 aa14.25□□□□□ -0.13
FOXN3-212ENST00000556541 MVPQ14764 893 aaKnown RBP14.25□□□□□ -0.13
FOXN3-212ENST00000556541 CARMIL3Q8ND23 1372 aa14.24□□□□□ -0.13
FOXN3-212ENST00000556541 MYH3P11055 1940 aa14.24□□□□□ -0.13
FOXN3-212ENST00000556541 RLBP1P12271 317 aa14.24□□□□□ -0.13
FOXN3-212ENST00000556541 TM4SF1P30408 202 aa14.24□□□□□ -0.13
FOXN3-212ENST00000556541 DDX19BQ9UMR2 479 aa14.24□□□□□ -0.13
FOXN3-212ENST00000556541 HDAC5Q9UQL6 1122 aa14.24□□□□□ -0.13
FOXN3-212ENST00000556541 PLIN1O60240 522 aa14.23□□□□□ -0.13
FOXN3-212ENST00000556541 GCKRQ14397 625 aa14.23□□□□□ -0.13
FOXN3-212ENST00000556541 NLRP10Q86W26 655 aa14.23□□□□□ -0.13
FOXN3-212ENST00000556541 TMEM57Q8N5G2 664 aa14.23□□□□□ -0.13
FOXN3-212ENST00000556541 MYD88Q99836 296 aa14.23□□□□□ -0.13
FOXN3-212ENST00000556541 CWC25Q9NXE8 425 aaPredicted RBP14.23□□□□□ -0.13
FOXN3-212ENST00000556541 SRP68Q9UHB9 627 aaKnown RBP14.23□□□□□ -0.13
FOXN3-212ENST00000556541 UBN2Q6ZU65 1347 aa14.22□□□□□ -0.13
FOXN3-212ENST00000556541 CDHR2Q9BYE9 1310 aa14.22□□□□□ -0.13
FOXN3-212ENST00000556541 HSP90B1P14625 803 aaKnown RBP14.22□□□□□ -0.13
FOXN3-212ENST00000556541 FKBP8Q14318 412 aa14.22□□□□□ -0.13
FOXN3-212ENST00000556541 ERICH6BQ5W0A0 696 aa14.22□□□□□ -0.13
FOXN3-212ENST00000556541 PPP1R42Q7Z4L9 355 aa14.22□□□□□ -0.13
FOXN3-212ENST00000556541 SETDB2Q96T68 719 aa14.22□□□□□ -0.13
FOXN3-212ENST00000556541 NYXQ9GZU5 481 aa14.22□□□□□ -0.13
FOXN3-212ENST00000556541 KIF13BQ9NQT8 1826 aa14.22□□□□□ -0.13
FOXN3-212ENST00000556541 DDX60Q8IY21 1712 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms