RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 STYK1Q6J9G0 422 aa16.75■□□□□ 0.27
APEX1-213ENST00000556296 PRR5LQ6MZQ0 368 aa16.75■□□□□ 0.27
APEX1-213ENST00000556296 CLEC4GQ6UXB4 293 aa16.75■□□□□ 0.27
APEX1-213ENST00000556296 PNNQ9H307 717 aaKnown RBP16.75■□□□□ 0.27
APEX1-213ENST00000556296 SBF1O95248 1867 aa16.74■□□□□ 0.27
APEX1-213ENST00000556296 KCNQ3O43525 872 aa16.74■□□□□ 0.27
APEX1-213ENST00000556296 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
APEX1-213ENST00000556296 C21orf2O43822 256 aa16.74■□□□□ 0.27
APEX1-213ENST00000556296 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
APEX1-213ENST00000556296 TAOK3Q9H2K8 898 aa16.74■□□□□ 0.27
APEX1-213ENST00000556296 NFKBIEO00221 500 aa16.73■□□□□ 0.27
APEX1-213ENST00000556296 CAMTA2O94983 1202 aa16.73■□□□□ 0.27
APEX1-213ENST00000556296 NBPF5PQ86XG9 351 aaPredicted RBP16.73■□□□□ 0.27
APEX1-213ENST00000556296 MASTLQ96GX5 879 aa16.73■□□□□ 0.27
APEX1-213ENST00000556296 RGL2O15211 777 aa16.72■□□□□ 0.27
APEX1-213ENST00000556296 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
APEX1-213ENST00000556296 ADAMTS8Q9UP79 889 aa16.72■□□□□ 0.27
APEX1-213ENST00000556296 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
APEX1-213ENST00000556296 LTBP3Q9NS15 1303 aa16.71■□□□□ 0.27
APEX1-213ENST00000556296 ANKRD31Q8N7Z5 1873 aa16.71■□□□□ 0.27
APEX1-213ENST00000556296 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
APEX1-213ENST00000556296 MCM10Q7L590 875 aa16.71■□□□□ 0.27
APEX1-213ENST00000556296 JMYQ8N9B5 988 aa16.71■□□□□ 0.27
APEX1-213ENST00000556296 USP16Q9Y5T5 823 aa16.71■□□□□ 0.27
APEX1-213ENST00000556296 SRGNP10124 158 aa16.7■□□□□ 0.26
APEX1-213ENST00000556296 FAM9BQ8IZU0 186 aa16.7■□□□□ 0.26
APEX1-213ENST00000556296 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
APEX1-213ENST00000556296 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
APEX1-213ENST00000556296 NPR1P16066 1061 aa16.69■□□□□ 0.26
APEX1-213ENST00000556296 GTF2E1P29083 439 aaPredicted RBP16.69■□□□□ 0.26
APEX1-213ENST00000556296 HTRA3P83110 453 aa16.69■□□□□ 0.26
APEX1-213ENST00000556296 DCTN1Q14203 1278 aa16.69■□□□□ 0.26
APEX1-213ENST00000556296 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
APEX1-213ENST00000556296 PRPF40BQ6NWY9 871 aaKnown RBP16.69■□□□□ 0.26
APEX1-213ENST00000556296 IQCA1LA6NCM1 817 aa16.68■□□□□ 0.26
APEX1-213ENST00000556296 CCDC93Q567U6 631 aa16.68■□□□□ 0.26
APEX1-213ENST00000556296 KDM3BQ7LBC6 1761 aa16.67■□□□□ 0.26
APEX1-213ENST00000556296 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
APEX1-213ENST00000556296 PRELPP51888 382 aa16.67■□□□□ 0.26
APEX1-213ENST00000556296 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
APEX1-213ENST00000556296 PLEKHF1Q96S99 279 aa16.67■□□□□ 0.26
APEX1-213ENST00000556296 NIP7Q9Y221 180 aaKnown RBP eCLIP16.67■□□□□ 0.26
APEX1-213ENST00000556296 LAMB4A4D0S4 1761 aa16.66■□□□□ 0.26
APEX1-213ENST00000556296 TNRC6CQ9HCJ0 1690 aaKnown RBP16.66■□□□□ 0.26
APEX1-213ENST00000556296 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
APEX1-213ENST00000556296 CCDC88AQ3V6T2 1871 aa16.66■□□□□ 0.26
APEX1-213ENST00000556296 RTKN2Q8IZC4 609 aa16.66■□□□□ 0.26
APEX1-213ENST00000556296 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
APEX1-213ENST00000556296 CHADLQ6NUI6 762 aa16.65■□□□□ 0.26
APEX1-213ENST00000556296 CCDC146Q8IYE0 955 aa16.65■□□□□ 0.26
APEX1-213ENST00000556296 NYXQ9GZU5 481 aa16.65■□□□□ 0.26
APEX1-213ENST00000556296 PIP4K2AP48426 406 aaPredicted RBP16.64■□□□□ 0.25
APEX1-213ENST00000556296 KLRG2A4D1S0 409 aaPredicted RBP16.62■□□□□ 0.25
APEX1-213ENST00000556296 POTECB2RU33 542 aa16.62■□□□□ 0.25
APEX1-213ENST00000556296 NBPF26B4DH59 902 aa16.62■□□□□ 0.25
APEX1-213ENST00000556296 DDNO94850 711 aaPredicted RBP16.62■□□□□ 0.25
APEX1-213ENST00000556296 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
APEX1-213ENST00000556296 NFE2L2Q16236 605 aa16.62■□□□□ 0.25
APEX1-213ENST00000556296 NBPF10Q6P3W6 841 aaKnown RBP16.62■□□□□ 0.25
APEX1-213ENST00000556296 KIF6Q6ZMV9 814 aa16.62■□□□□ 0.25
APEX1-213ENST00000556296 NBPF15Q8N660 670 aa16.62■□□□□ 0.25
APEX1-213ENST00000556296 WDR90Q96KV7 1748 aa16.62■□□□□ 0.25
APEX1-213ENST00000556296 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
APEX1-213ENST00000556296 FAM177BA6PVY3 158 aa16.61■□□□□ 0.25
APEX1-213ENST00000556296 ERVV-1B6SEH8 477 aa16.61■□□□□ 0.25
APEX1-213ENST00000556296 LDHDQ86WU2 507 aa16.61■□□□□ 0.25
APEX1-213ENST00000556296 CREBZFQ9NS37 354 aa16.61■□□□□ 0.25
APEX1-213ENST00000556296 MIS18AQ9NYP9 233 aa16.61■□□□□ 0.25
APEX1-213ENST00000556296 ARFGEF2Q9Y6D5 1785 aa16.61■□□□□ 0.25
APEX1-213ENST00000556296 GRIPAP1Q4V328 841 aa16.6■□□□□ 0.25
APEX1-213ENST00000556296 CC2D2BQ6DHV5 1058 aa16.6■□□□□ 0.25
APEX1-213ENST00000556296 TNS4Q8IZW8 715 aa16.6■□□□□ 0.25
APEX1-213ENST00000556296 C7orf43Q8WVR3 580 aa16.6■□□□□ 0.25
APEX1-213ENST00000556296 TMX4Q9H1E5 349 aaPredicted RBP16.6■□□□□ 0.25
APEX1-213ENST00000556296 CACNA1SQ13698 1873 aa16.6■□□□□ 0.25
APEX1-213ENST00000556296 DICER1Q9UPY3 1922 aaKnown RBP16.6■□□□□ 0.25
APEX1-213ENST00000556296 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
APEX1-213ENST00000556296 APAF1O14727 1248 aa16.59■□□□□ 0.25
APEX1-213ENST00000556296 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
APEX1-213ENST00000556296 JDP2Q8WYK2 163 aa16.59■□□□□ 0.25
APEX1-213ENST00000556296 L3MBTL3Q96JM7 780 aaPredicted RBP16.59■□□□□ 0.25
APEX1-213ENST00000556296 NUP98P52948 1817 aa16.59■□□□□ 0.25
APEX1-213ENST00000556296 HSPA1AP0DMV8 641 aaKnown RBP16.58■□□□□ 0.24
APEX1-213ENST00000556296 HSPA1BP0DMV9 641 aaKnown RBP16.58■□□□□ 0.24
APEX1-213ENST00000556296 TMPOP42166 694 aaKnown RBP16.58■□□□□ 0.24
APEX1-213ENST00000556296 EIF4A1P60842 406 aaKnown RBP16.58■□□□□ 0.24
APEX1-213ENST00000556296 COL13A1Q5TAT6 717 aaPredicted RBP16.58■□□□□ 0.24
APEX1-213ENST00000556296 PNMA8AQ86V59 439 aaPredicted RBP16.58■□□□□ 0.24
APEX1-213ENST00000556296 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
APEX1-213ENST00000556296 HACL1Q9UJ83 578 aa16.58■□□□□ 0.24
APEX1-213ENST00000556296 TIAM2Q8IVF5 1701 aa16.58■□□□□ 0.24
APEX1-213ENST00000556296 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
APEX1-213ENST00000556296 RIPK4P57078 832 aa16.57■□□□□ 0.24
APEX1-213ENST00000556296 LMOD3Q0VAK6 560 aa16.57■□□□□ 0.24
APEX1-213ENST00000556296 HLFQ16534 295 aa16.57■□□□□ 0.24
APEX1-213ENST00000556296 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
APEX1-213ENST00000556296 TAF1DQ9H5J8 278 aaPredicted RBP16.57■□□□□ 0.24
APEX1-213ENST00000556296 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
APEX1-213ENST00000556296 CLEC11AQ9Y240 323 aa16.57■□□□□ 0.24
APEX1-213ENST00000556296 RRP7AQ9Y3A4 280 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms