RNA–Protein interactions for RNA: ENST00000556077.5

TTC8-211, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 5

Gene TTC8, Length 1,020 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-211ENST00000556077 DZIP3Q86Y13 1208 aaKnown RBP18.19■□□□□ 0.5
TTC8-211ENST00000556077 RTKN2Q8IZC4 609 aa18.19■□□□□ 0.5
TTC8-211ENST00000556077 PRDM10Q9NQV6 1147 aa18.19■□□□□ 0.5
TTC8-211ENST00000556077 MKRN1Q9UHC7 482 aaKnown RBP18.19■□□□□ 0.5
TTC8-211ENST00000556077 UBR2Q8IWV8 1755 aa18.19■□□□□ 0.5
TTC8-211ENST00000556077 FER1L6Q2WGJ9 1857 aa18.18■□□□□ 0.5
TTC8-211ENST00000556077 CAMTA2O94983 1202 aa18.18■□□□□ 0.5
TTC8-211ENST00000556077 NPR1P16066 1061 aa18.18■□□□□ 0.5
TTC8-211ENST00000556077 CCDC93Q567U6 631 aa18.18■□□□□ 0.5
TTC8-211ENST00000556077 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
TTC8-211ENST00000556077 VIRMAQ69YN4 1812 aaKnown RBP18.17■□□□□ 0.5
TTC8-211ENST00000556077 TMEM88BA6NKF7 163 aa18.17■□□□□ 0.5
TTC8-211ENST00000556077 ALDH1B1P30837 517 aa18.17■□□□□ 0.5
TTC8-211ENST00000556077 CC2D1BQ5T0F9 858 aaKnown RBP18.17■□□□□ 0.5
TTC8-211ENST00000556077 CNTNAP1P78357 1384 aa18.17■□□□□ 0.5
TTC8-211ENST00000556077 CTCFP49711 727 aaPredicted RBP18.16■□□□□ 0.5
TTC8-211ENST00000556077 CCDC24Q8N4L8 307 aa18.16■□□□□ 0.5
TTC8-211ENST00000556077 TAF1DQ9H5J8 278 aaPredicted RBP18.16■□□□□ 0.5
TTC8-211ENST00000556077 PASKQ96RG2 1323 aa18.16■□□□□ 0.5
TTC8-211ENST00000556077 KLRG2A4D1S0 409 aaPredicted RBP18.15■□□□□ 0.5
TTC8-211ENST00000556077 SNRPA1P09661 255 aaKnown RBP18.15■□□□□ 0.5
TTC8-211ENST00000556077 FKBP4Q02790 459 aaKnown RBP eCLIP18.15■□□□□ 0.5
TTC8-211ENST00000556077 C7orf43Q8WVR3 580 aa18.15■□□□□ 0.5
TTC8-211ENST00000556077 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
TTC8-211ENST00000556077 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
TTC8-211ENST00000556077 HACL1Q9UJ83 578 aa18.15■□□□□ 0.5
TTC8-211ENST00000556077 KIF7Q2M1P5 1343 aa18.15■□□□□ 0.5
TTC8-211ENST00000556077 CEMIPQ8WUJ3 1361 aa18.15■□□□□ 0.5
TTC8-211ENST00000556077 NPC1L1Q9UHC9 1359 aa18.15■□□□□ 0.5
TTC8-211ENST00000556077 NUDCQ9Y266 331 aa18.14■□□□□ 0.49
TTC8-211ENST00000556077 ANKRD31Q8N7Z5 1873 aa18.14■□□□□ 0.49
TTC8-211ENST00000556077 GRIPAP1Q4V328 841 aa18.13■□□□□ 0.49
TTC8-211ENST00000556077 CLEC11AQ9Y240 323 aa18.13■□□□□ 0.49
TTC8-211ENST00000556077 USP16Q9Y5T5 823 aa18.13■□□□□ 0.49
TTC8-211ENST00000556077 SCN4AP35499 1836 aa18.13■□□□□ 0.49
TTC8-211ENST00000556077 ITGBL1O95965 494 aaPredicted RBP18.12■□□□□ 0.49
TTC8-211ENST00000556077 POTEIP0CG38 1075 aa18.12■□□□□ 0.49
TTC8-211ENST00000556077 POTEJP0CG39 1038 aa18.12■□□□□ 0.49
TTC8-211ENST00000556077 GTF2E1P29083 439 aaPredicted RBP18.12■□□□□ 0.49
TTC8-211ENST00000556077 EAPPQ56P03 285 aaPredicted RBP18.12■□□□□ 0.49
TTC8-211ENST00000556077 CCER1Q8TC90 406 aaPredicted RBP18.12■□□□□ 0.49
TTC8-211ENST00000556077 JDP2Q8WYK2 163 aa18.12■□□□□ 0.49
TTC8-211ENST00000556077 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
TTC8-211ENST00000556077 FOXN1O15353 648 aa18.11■□□□□ 0.49
TTC8-211ENST00000556077 CC2D2BQ6DHV5 1058 aa18.11■□□□□ 0.49
TTC8-211ENST00000556077 NIP7Q9Y221 180 aaKnown RBP eCLIP18.11■□□□□ 0.49
TTC8-211ENST00000556077 SLX4Q8IY92 1834 aa18.11■□□□□ 0.49
TTC8-211ENST00000556077 HTATSF1O43719 755 aaKnown RBP18.1■□□□□ 0.49
TTC8-211ENST00000556077 EPHX2P34913 555 aa18.1■□□□□ 0.49
TTC8-211ENST00000556077 VEGFBP49765 207 aa18.1■□□□□ 0.49
TTC8-211ENST00000556077 MAP2K1Q02750 393 aaPredicted RBP18.1■□□□□ 0.49
TTC8-211ENST00000556077 DEFB115Q30KQ5 88 aa18.1■□□□□ 0.49
TTC8-211ENST00000556077 GPC2Q8N158 579 aa18.1■□□□□ 0.49
TTC8-211ENST00000556077 FZD9O00144 591 aa18.09■□□□□ 0.49
TTC8-211ENST00000556077 CNTROBQ8N137 903 aa18.09■□□□□ 0.49
TTC8-211ENST00000556077 NYXQ9GZU5 481 aa18.09■□□□□ 0.49
TTC8-211ENST00000556077 WBP1LQ9NX94 342 aa18.09■□□□□ 0.49
TTC8-211ENST00000556077 PRKAR2BP31323 418 aa18.08■□□□□ 0.48
TTC8-211ENST00000556077 IARSP41252 1262 aaKnown RBP18.08■□□□□ 0.48
TTC8-211ENST00000556077 PSMD1Q99460 953 aa18.08■□□□□ 0.48
TTC8-211ENST00000556077 ZNF277Q9NRM2 450 aaPredicted RBP18.08■□□□□ 0.48
TTC8-211ENST00000556077 COL11A2P13942 1736 aaPredicted RBP18.07■□□□□ 0.48
TTC8-211ENST00000556077 RASSF10A6NK89 507 aa18.07■□□□□ 0.48
TTC8-211ENST00000556077 KCNQ3O43525 872 aa18.07■□□□□ 0.48
TTC8-211ENST00000556077 EIF6P56537 245 aaKnown RBP18.07■□□□□ 0.48
TTC8-211ENST00000556077 SYNE4Q8N205 404 aa18.07■□□□□ 0.48
TTC8-211ENST00000556077 PHACTR3Q96KR7 559 aa18.07■□□□□ 0.48
TTC8-211ENST00000556077 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
TTC8-211ENST00000556077 LMOD1P29536 600 aaPredicted RBP18.06■□□□□ 0.48
TTC8-211ENST00000556077 RSPH6AQ9H0K4 717 aa18.06■□□□□ 0.48
TTC8-211ENST00000556077 SIPA1L3O60292 1781 aaPredicted RBP18.06■□□□□ 0.48
TTC8-211ENST00000556077 BEGAINQ9BUH8 593 aa18.05■□□□□ 0.48
TTC8-211ENST00000556077 TMX4Q9H1E5 349 aaPredicted RBP18.05■□□□□ 0.48
TTC8-211ENST00000556077 COL3A1P02461 1466 aaPredicted RBP18.04■□□□□ 0.48
TTC8-211ENST00000556077 ERVV-1B6SEH8 477 aa18.04■□□□□ 0.48
TTC8-211ENST00000556077 NEFMP07197 916 aa18.04■□□□□ 0.48
TTC8-211ENST00000556077 TAF7Q15545 349 aaPredicted RBP18.04■□□□□ 0.48
TTC8-211ENST00000556077 WDR33Q9C0J8 1336 aaKnown RBP18.03■□□□□ 0.48
TTC8-211ENST00000556077 ZNF541Q9H0D2 1346 aa18.03■□□□□ 0.48
TTC8-211ENST00000556077 ECE1P42892 770 aa18.03■□□□□ 0.48
TTC8-211ENST00000556077 LBX1P52954 281 aa18.03■□□□□ 0.48
TTC8-211ENST00000556077 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
TTC8-211ENST00000556077 ABT1Q9ULW3 272 aaKnown RBP18.03■□□□□ 0.48
TTC8-211ENST00000556077 RNF123Q5XPI4 1314 aa18.02■□□□□ 0.48
TTC8-211ENST00000556077 BCORQ6W2J9 1755 aa18.02■□□□□ 0.48
TTC8-211ENST00000556077 U2AF1L5P0DN76 240 aaPredicted RBP18.02■□□□□ 0.48
TTC8-211ENST00000556077 PIP4K2AP48426 406 aaPredicted RBP18.02■□□□□ 0.48
TTC8-211ENST00000556077 U2AF1Q01081 240 aaKnown RBP eCLIP18.02■□□□□ 0.48
TTC8-211ENST00000556077 CRY2Q49AN0 593 aa18.02■□□□□ 0.48
TTC8-211ENST00000556077 MAP1SQ66K74 1059 aaPredicted RBP18.02■□□□□ 0.48
TTC8-211ENST00000556077 RPGRQ92834 1020 aaKnown RBP18.02■□□□□ 0.48
TTC8-211ENST00000556077 VPS33BQ9H267 617 aa18.02■□□□□ 0.48
TTC8-211ENST00000556077 FAM177BA6PVY3 158 aa18.01■□□□□ 0.47
TTC8-211ENST00000556077 NBPF26B4DH59 902 aa18.01■□□□□ 0.47
TTC8-211ENST00000556077 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
TTC8-211ENST00000556077 NBPF10Q6P3W6 841 aaKnown RBP18.01■□□□□ 0.47
TTC8-211ENST00000556077 MCM10Q7L590 875 aa18.01■□□□□ 0.47
TTC8-211ENST00000556077 NBPF15Q8N660 670 aa18.01■□□□□ 0.47
TTC8-211ENST00000556077 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
TTC8-211ENST00000556077 CACNA1SQ13698 1873 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms