RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 ARHGEF1Q92888 912 aaKnown RBP15.91■□□□□ 0.14
ABCD4-223ENST00000555904 ZBTB3Q9H5J0 574 aa15.91■□□□□ 0.14
ABCD4-223ENST00000555904 MAP3K15Q6ZN16 1313 aa15.91■□□□□ 0.14
ABCD4-223ENST00000555904 MYH14Q7Z406 1995 aaKnown RBP15.9■□□□□ 0.14
ABCD4-223ENST00000555904 ERVV-1B6SEH8 477 aa15.9■□□□□ 0.14
ABCD4-223ENST00000555904 MS4A1P11836 297 aa15.9■□□□□ 0.14
ABCD4-223ENST00000555904 NEXNQ0ZGT2 675 aa15.9■□□□□ 0.14
ABCD4-223ENST00000555904 KSR2Q6VAB6 950 aa15.9■□□□□ 0.14
ABCD4-223ENST00000555904 FTSJ3Q8IY81 847 aaKnown RBP15.9■□□□□ 0.14
ABCD4-223ENST00000555904 NARFQ9UHQ1 456 aa15.9■□□□□ 0.14
ABCD4-223ENST00000555904 UBR3Q6ZT12 1888 aa15.9■□□□□ 0.14
ABCD4-223ENST00000555904 PNPLA7Q6ZV29 1317 aa15.9■□□□□ 0.14
ABCD4-223ENST00000555904 USP42Q9H9J4 1324 aaKnown RBP15.9■□□□□ 0.14
ABCD4-223ENST00000555904 PI4KAP2A4QPH2 592 aa15.89■□□□□ 0.13
ABCD4-223ENST00000555904 RGL2O15211 777 aa15.89■□□□□ 0.13
ABCD4-223ENST00000555904 HSP90AB3PQ58FF7 597 aa15.89■□□□□ 0.13
ABCD4-223ENST00000555904 ATF7IPQ6VMQ6 1270 aa15.89■□□□□ 0.13
ABCD4-223ENST00000555904 AMIGO3Q86WK7 504 aa15.89■□□□□ 0.13
ABCD4-223ENST00000555904 PI4KAP1Q8N8J0 262 aa15.89■□□□□ 0.13
ABCD4-223ENST00000555904 MAP3K2Q9Y2U5 619 aa15.89■□□□□ 0.13
ABCD4-223ENST00000555904 SLC4A10Q6U841 1118 aa15.88■□□□□ 0.13
ABCD4-223ENST00000555904 SMIM5Q71RC9 77 aa15.88■□□□□ 0.13
ABCD4-223ENST00000555904 DNAAF4Q8WXU2 420 aa15.88■□□□□ 0.13
ABCD4-223ENST00000555904 ADCY9O60503 1353 aa15.87■□□□□ 0.13
ABCD4-223ENST00000555904 CACNA1FO60840 1977 aa15.87■□□□□ 0.13
ABCD4-223ENST00000555904 SCN7AQ01118 1682 aa15.87■□□□□ 0.13
ABCD4-223ENST00000555904 CAMTA2O94983 1202 aa15.87■□□□□ 0.13
ABCD4-223ENST00000555904 TRIM27P14373 513 aa15.87■□□□□ 0.13
ABCD4-223ENST00000555904 RRP1P56182 461 aaKnown RBP15.87■□□□□ 0.13
ABCD4-223ENST00000555904 USPL1Q5W0Q7 1092 aa15.87■□□□□ 0.13
ABCD4-223ENST00000555904 CLEC4GQ6UXB4 293 aa15.87■□□□□ 0.13
ABCD4-223ENST00000555904 COL23A1Q86Y22 540 aaPredicted RBP15.87■□□□□ 0.13
ABCD4-223ENST00000555904 SRP68Q9UHB9 627 aaKnown RBP15.87■□□□□ 0.13
ABCD4-223ENST00000555904 C4AP0C0L4 1744 aa15.87■□□□□ 0.13
ABCD4-223ENST00000555904 QSER1Q2KHR3 1735 aa15.87■□□□□ 0.13
ABCD4-223ENST00000555904 F6X3S4 739 aa15.86■□□□□ 0.13
ABCD4-223ENST00000555904 R3HDM1Q15032 1099 aaKnown RBP15.86■□□□□ 0.13
ABCD4-223ENST00000555904 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
ABCD4-223ENST00000555904 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
ABCD4-223ENST00000555904 PXDNLA1KZ92 1463 aa15.85■□□□□ 0.13
ABCD4-223ENST00000555904 DZIP1LQ8IYY4 767 aaKnown RBP15.85■□□□□ 0.13
ABCD4-223ENST00000555904 CLUAP1Q96AJ1 413 aa15.85■□□□□ 0.13
ABCD4-223ENST00000555904 MYD88Q99836 296 aa15.85■□□□□ 0.13
ABCD4-223ENST00000555904 METTL22Q9BUU2 404 aaPredicted RBP15.85■□□□□ 0.13
ABCD4-223ENST00000555904 BCORQ6W2J9 1755 aa15.85■□□□□ 0.13
ABCD4-223ENST00000555904 TUBGCP6Q96RT7 1819 aa15.84■□□□□ 0.13
ABCD4-223ENST00000555904 PLIN1O60240 522 aa15.84■□□□□ 0.13
ABCD4-223ENST00000555904 CCT4P50991 539 aaKnown RBP15.84■□□□□ 0.13
ABCD4-223ENST00000555904 HLFQ16534 295 aa15.84■□□□□ 0.13
ABCD4-223ENST00000555904 NLGN1Q8N2Q7 840 aa15.84■□□□□ 0.13
ABCD4-223ENST00000555904 SLC16A10Q8TF71 515 aa15.84■□□□□ 0.13
ABCD4-223ENST00000555904 ARFGEF2Q9Y6D5 1785 aa15.84■□□□□ 0.13
ABCD4-223ENST00000555904 ATP10DQ9P241 1426 aa15.84■□□□□ 0.13
ABCD4-223ENST00000555904 GYS1P13807 737 aa15.83■□□□□ 0.12
ABCD4-223ENST00000555904 TCIRG1Q13488 830 aa15.83■□□□□ 0.12
ABCD4-223ENST00000555904 PDE3AQ14432 1141 aa15.83■□□□□ 0.12
ABCD4-223ENST00000555904 LINS1Q8NG48 757 aa15.83■□□□□ 0.12
ABCD4-223ENST00000555904 SETDB2Q96T68 719 aa15.83■□□□□ 0.12
ABCD4-223ENST00000555904 SRCIN1Q9C0H9 1055 aa15.83■□□□□ 0.12
ABCD4-223ENST00000555904 NIP7Q9Y221 180 aaKnown RBP eCLIP15.83■□□□□ 0.12
ABCD4-223ENST00000555904 ABCC4O15439 1325 aa15.83■□□□□ 0.12
ABCD4-223ENST00000555904 PSDA5PKW4 1024 aaPredicted RBP15.82■□□□□ 0.12
ABCD4-223ENST00000555904 NPHP1O15259 732 aa15.82■□□□□ 0.12
ABCD4-223ENST00000555904 GPTP24298 496 aa15.82■□□□□ 0.12
ABCD4-223ENST00000555904 PARP10Q53GL7 1025 aa15.82■□□□□ 0.12
ABCD4-223ENST00000555904 BICDL1Q6ZP65 573 aa15.82■□□□□ 0.12
ABCD4-223ENST00000555904 ATP5J2-PTCD1G3V325 749 aa15.81■□□□□ 0.12
ABCD4-223ENST00000555904 ALDH1L1O75891 902 aa15.81■□□□□ 0.12
ABCD4-223ENST00000555904 FKBP8Q14318 412 aa15.81■□□□□ 0.12
ABCD4-223ENST00000555904 ITPRIPQ8IWB1 547 aa15.81■□□□□ 0.12
ABCD4-223ENST00000555904 CARMIL3Q8ND23 1372 aa15.81■□□□□ 0.12
ABCD4-223ENST00000555904 BCL2L12Q9HB09 334 aa15.81■□□□□ 0.12
ABCD4-223ENST00000555904 RNF123Q5XPI4 1314 aa15.8■□□□□ 0.12
ABCD4-223ENST00000555904 BEND3Q5T5X7 828 aa15.8■□□□□ 0.12
ABCD4-223ENST00000555904 TBC1D9BQ66K14 1250 aa15.8■□□□□ 0.12
ABCD4-223ENST00000555904 MSL1Q68DK7 614 aa15.8■□□□□ 0.12
ABCD4-223ENST00000555904 PPP1R42Q7Z4L9 355 aa15.8■□□□□ 0.12
ABCD4-223ENST00000555904 CCDC191Q8NCU4 936 aa15.8■□□□□ 0.12
ABCD4-223ENST00000555904 PANK1Q8TE04 598 aa15.8■□□□□ 0.12
ABCD4-223ENST00000555904 CWC25Q9NXE8 425 aaPredicted RBP15.8■□□□□ 0.12
ABCD4-223ENST00000555904 NEURL1BA8MQ27 555 aa15.79■□□□□ 0.12
ABCD4-223ENST00000555904 NEFLP07196 543 aa15.79■□□□□ 0.12
ABCD4-223ENST00000555904 TRIM28Q13263 835 aaKnown RBP15.79■□□□□ 0.12
ABCD4-223ENST00000555904 CWF19L2Q2TBE0 894 aaKnown RBP15.79■□□□□ 0.12
ABCD4-223ENST00000555904 INTS3Q68E01 1043 aaKnown RBP15.79■□□□□ 0.12
ABCD4-223ENST00000555904 ZNF34Q8IZ26 560 aa15.79■□□□□ 0.12
ABCD4-223ENST00000555904 TMEM57Q8N5G2 664 aa15.79■□□□□ 0.12
ABCD4-223ENST00000555904 ISCA1Q9BUE6 129 aa15.79■□□□□ 0.12
ABCD4-223ENST00000555904 NYXQ9GZU5 481 aa15.79■□□□□ 0.12
ABCD4-223ENST00000555904 MTFR1LQ9H019 292 aa15.79■□□□□ 0.12
ABCD4-223ENST00000555904 CHMP4BQ9H444 224 aaKnown RBP15.79■□□□□ 0.12
ABCD4-223ENST00000555904 C9orf78Q9NZ63 289 aaPredicted RBP15.79■□□□□ 0.12
ABCD4-223ENST00000555904 IGKV5-2P06315 115 aa15.78■□□□□ 0.12
ABCD4-223ENST00000555904 GTF2E1P29083 439 aaPredicted RBP15.78■□□□□ 0.12
ABCD4-223ENST00000555904 NFIXQ14938 502 aa15.78■□□□□ 0.12
ABCD4-223ENST00000555904 NLRP10Q86W26 655 aa15.78■□□□□ 0.12
ABCD4-223ENST00000555904 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
ABCD4-223ENST00000555904 PDGFDQ9GZP0 370 aaPredicted RBP15.78■□□□□ 0.12
ABCD4-223ENST00000555904 TNNQ9UQP3 1299 aa15.78■□□□□ 0.12
ABCD4-223ENST00000555904 PARP3Q9Y6F1 533 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms