RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 NBPF5PQ86XG9 351 aaPredicted RBP32.08■■■□□ 2.73
PRKCH-216ENST00000555542 ZNF622Q969S3 477 aaKnown RBP eCLIP32.08■■■□□ 2.73
PRKCH-216ENST00000555542 PDZRN3Q9UPQ7 1066 aa32.08■■■□□ 2.73
PRKCH-216ENST00000555542 C9orf131Q5VYM1 1079 aa32.07■■■□□ 2.72
PRKCH-216ENST00000555542 ADAMTS8Q9UP79 889 aa32.07■■■□□ 2.72
PRKCH-216ENST00000555542 MYL6BP14649 208 aa32.06■■■□□ 2.72
PRKCH-216ENST00000555542 NIP7Q9Y221 180 aaKnown RBP eCLIP32.06■■■□□ 2.72
PRKCH-216ENST00000555542 KIF6Q6ZMV9 814 aa32.04■■■□□ 2.72
PRKCH-216ENST00000555542 SENP3-EIF4A1A0A087X0R7 540 aa32.03■■■□□ 2.72
PRKCH-216ENST00000555542 BABAM1Q9NWV8 329 aa32.03■■■□□ 2.72
PRKCH-216ENST00000555542 RNF181Q9P0P0 153 aa32.03■■■□□ 2.72
PRKCH-216ENST00000555542 COL11A2P13942 1736 aaPredicted RBP32.03■■■□□ 2.72
PRKCH-216ENST00000555542 FAM177BA6PVY3 158 aa32.02■■■□□ 2.72
PRKCH-216ENST00000555542 RGL2O15211 777 aa32.02■■■□□ 2.72
PRKCH-216ENST00000555542 LAS1LQ9Y4W2 734 aaKnown RBP32.02■■■□□ 2.72
PRKCH-216ENST00000555542 HLFQ16534 295 aa32.01■■■□□ 2.71
PRKCH-216ENST00000555542 EIF2S2P20042 333 aaKnown RBP32■■■□□ 2.71
PRKCH-216ENST00000555542 TPTE2Q6XPS3 522 aa32■■■□□ 2.71
PRKCH-216ENST00000555542 RASSF7Q02833 373 aa31.99■■■□□ 2.71
PRKCH-216ENST00000555542 ERBB4Q15303 1308 aa31.99■■■□□ 2.71
PRKCH-216ENST00000555542 GTF2E1P29083 439 aaPredicted RBP31.98■■■□□ 2.71
PRKCH-216ENST00000555542 ZNF219Q9P2Y4 722 aaPredicted RBP31.98■■■□□ 2.71
PRKCH-216ENST00000555542 MAP3K15Q6ZN16 1313 aa31.98■■■□□ 2.71
PRKCH-216ENST00000555542 SBF1O95248 1867 aa31.97■■■□□ 2.71
PRKCH-216ENST00000555542 TRIM35Q9UPQ4 493 aa31.97■■■□□ 2.71
PRKCH-216ENST00000555542 CACNA1SQ13698 1873 aa31.97■■■□□ 2.71
PRKCH-216ENST00000555542 ERVV-1B6SEH8 477 aa31.96■■■□□ 2.71
PRKCH-216ENST00000555542 TTLL7Q6ZT98 887 aa31.96■■■□□ 2.71
PRKCH-216ENST00000555542 ZBTB3Q9H5J0 574 aa31.96■■■□□ 2.71
PRKCH-216ENST00000555542 NUP98P52948 1817 aa31.96■■■□□ 2.71
PRKCH-216ENST00000555542 CNKSR1Q969H4 720 aa31.95■■■□□ 2.71
PRKCH-216ENST00000555542 C21orf2O43822 256 aa31.94■■■□□ 2.7
PRKCH-216ENST00000555542 STYK1Q6J9G0 422 aa31.94■■■□□ 2.7
PRKCH-216ENST00000555542 MASTLQ96GX5 879 aa31.94■■■□□ 2.7
PRKCH-216ENST00000555542 SRGNP10124 158 aa31.93■■■□□ 2.7
PRKCH-216ENST00000555542 LMNB1P20700 586 aa31.92■■■□□ 2.7
PRKCH-216ENST00000555542 NECTIN2Q92692 538 aa31.92■■■□□ 2.7
PRKCH-216ENST00000555542 NYXQ9GZU5 481 aa31.92■■■□□ 2.7
PRKCH-216ENST00000555542 CHL1O00533 1208 aa31.91■■■□□ 2.7
PRKCH-216ENST00000555542 KIF3CO14782 793 aa31.9■■■□□ 2.7
PRKCH-216ENST00000555542 GPTP24298 496 aa31.9■■■□□ 2.7
PRKCH-216ENST00000555542 PRPF40BQ6NWY9 871 aaKnown RBP31.9■■■□□ 2.7
PRKCH-216ENST00000555542 KDM2BQ8NHM5 1336 aa31.9■■■□□ 2.7
PRKCH-216ENST00000555542 CCDC88AQ3V6T2 1871 aa31.89■■■□□ 2.69
PRKCH-216ENST00000555542 ZNF316A6NFI3 1004 aaPredicted RBP31.88■■■□□ 2.69
PRKCH-216ENST00000555542 APAF1O14727 1248 aa31.88■■■□□ 2.69
PRKCH-216ENST00000555542 ANXA1P04083 346 aa31.88■■■□□ 2.69
PRKCH-216ENST00000555542 NPR1P16066 1061 aa31.88■■■□□ 2.69
PRKCH-216ENST00000555542 NMRK2Q9NPI5 230 aa31.88■■■□□ 2.69
PRKCH-216ENST00000555542 ARFGEF2Q9Y6D5 1785 aa31.88■■■□□ 2.69
PRKCH-216ENST00000555542 SLX4Q8IY92 1834 aa31.88■■■□□ 2.69
PRKCH-216ENST00000555542 NFKBIEO00221 500 aa31.87■■■□□ 2.69
PRKCH-216ENST00000555542 PDIA6Q15084 440 aa31.86■■■□□ 2.69
PRKCH-216ENST00000555542 KRT24Q2M2I5 525 aa31.86■■■□□ 2.69
PRKCH-216ENST00000555542 PROSER3Q2NL68 480 aa31.86■■■□□ 2.69
PRKCH-216ENST00000555542 NUTM1Q86Y26 1132 aa31.86■■■□□ 2.69
PRKCH-216ENST00000555542 ZC3H4Q9UPT8 1303 aaKnown RBP31.85■■■□□ 2.69
PRKCH-216ENST00000555542 SOGA3Q5TF21 947 aa31.85■■■□□ 2.69
PRKCH-216ENST00000555542 GIGYF2Q6Y7W6 1299 aaKnown RBP31.85■■■□□ 2.69
PRKCH-216ENST00000555542 TIAM2Q8IVF5 1701 aa31.85■■■□□ 2.69
PRKCH-216ENST00000555542 AIMP1Q12904 312 aaKnown RBP31.84■■■□□ 2.69
PRKCH-216ENST00000555542 C16orf71Q8IYS4 520 aaPredicted RBP31.84■■■□□ 2.69
PRKCH-216ENST00000555542 CFAP44Q96MT7 982 aa31.84■■■□□ 2.69
PRKCH-216ENST00000555542 FER1L6Q2WGJ9 1857 aa31.84■■■□□ 2.69
PRKCH-216ENST00000555542 TAOK3Q9H2K8 898 aa31.83■■■□□ 2.69
PRKCH-216ENST00000555542 UBN2Q6ZU65 1347 aa31.82■■■□□ 2.68
PRKCH-216ENST00000555542 PRELPP51888 382 aa31.82■■■□□ 2.68
PRKCH-216ENST00000555542 CALD1Q05682 793 aaKnown RBP31.82■■■□□ 2.68
PRKCH-216ENST00000555542 ERFEQ4G0M1 354 aa31.82■■■□□ 2.68
PRKCH-216ENST00000555542 ABCC12Q96J65 1359 aa31.81■■■□□ 2.68
PRKCH-216ENST00000555542 TNRC6CQ9HCJ0 1690 aaKnown RBP31.81■■■□□ 2.68
PRKCH-216ENST00000555542 KLRG2A4D1S0 409 aaPredicted RBP31.81■■■□□ 2.68
PRKCH-216ENST00000555542 HDGFL1Q5TGJ6 251 aa31.81■■■□□ 2.68
PRKCH-216ENST00000555542 SUSD4Q5VX71 490 aa31.81■■■□□ 2.68
PRKCH-216ENST00000555542 COPS6Q7L5N1 327 aa31.81■■■□□ 2.68
PRKCH-216ENST00000555542 LRP10Q7Z4F1 713 aa31.81■■■□□ 2.68
PRKCH-216ENST00000555542 ZNF34Q8IZ26 560 aa31.81■■■□□ 2.68
PRKCH-216ENST00000555542 IBTKQ9P2D0 1353 aaPredicted RBP31.81■■■□□ 2.68
PRKCH-216ENST00000555542 ANP32CO43423 234 aa31.8■■■□□ 2.68
PRKCH-216ENST00000555542 TOMM70O94826 608 aa31.8■■■□□ 2.68
PRKCH-216ENST00000555542 PPP1R42Q7Z4L9 355 aa31.8■■■□□ 2.68
PRKCH-216ENST00000555542 XAGE3Q8WTP9 111 aa31.8■■■□□ 2.68
PRKCH-216ENST00000555542 DDX21Q9NR30 783 aaKnown RBP eCLIP31.8■■■□□ 2.68
PRKCH-216ENST00000555542 PARP10Q53GL7 1025 aa31.79■■■□□ 2.68
PRKCH-216ENST00000555542 MBIPQ9NS73 344 aa31.79■■■□□ 2.68
PRKCH-216ENST00000555542 CHPF2Q9P2E5 772 aa31.79■■■□□ 2.68
PRKCH-216ENST00000555542 HOXB7P09629 217 aa31.78■■■□□ 2.68
PRKCH-216ENST00000555542 ALDH1B1P30837 517 aa31.78■■■□□ 2.68
PRKCH-216ENST00000555542 CCDC184Q52MB2 194 aa31.78■■■□□ 2.68
PRKCH-216ENST00000555542 CCDC93Q567U6 631 aa31.78■■■□□ 2.68
PRKCH-216ENST00000555542 RRAGCQ9HB90 399 aa31.78■■■□□ 2.68
PRKCH-216ENST00000555542 HSP90AB3PQ58FF7 597 aa31.77■■■□□ 2.68
PRKCH-216ENST00000555542 RPGRQ92834 1020 aaKnown RBP31.77■■■□□ 2.68
PRKCH-216ENST00000555542 LTBP3Q9NS15 1303 aa31.76■■■□□ 2.68
PRKCH-216ENST00000555542 GNAI1P63096 354 aa31.76■■■□□ 2.67
PRKCH-216ENST00000555542 DUSP27Q5VZP5 1158 aa31.76■■■□□ 2.67
PRKCH-216ENST00000555542 IFT57Q9NWB7 429 aa31.76■■■□□ 2.67
PRKCH-216ENST00000555542 NTSR2O95665 410 aa31.75■■■□□ 2.67
PRKCH-216ENST00000555542 HSPA6P17066 643 aa31.75■■■□□ 2.67
PRKCH-216ENST00000555542 ANKRD36CQ5JPF3 1778 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms