RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
AC004828.1-201ENST00000555303 SOGA3Q5TF21 947 aa11.89□□□□□ -0.51
AC004828.1-201ENST00000555303 STYK1Q6J9G0 422 aa11.89□□□□□ -0.51
AC004828.1-201ENST00000555303 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
AC004828.1-201ENST00000555303 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
AC004828.1-201ENST00000555303 CNKSR1Q969H4 720 aa11.89□□□□□ -0.51
AC004828.1-201ENST00000555303 NMRK2Q9NPI5 230 aa11.89□□□□□ -0.51
AC004828.1-201ENST00000555303 ERBB4Q15303 1308 aa11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 LTBP3Q9NS15 1303 aa11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 NBPF26B4DH59 902 aa11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 RASSF7Q02833 373 aa11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 LMOD3Q0VAK6 560 aa11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 NBPF10Q6P3W6 841 aaKnown RBP11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 NBPF15Q8N660 670 aa11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 BABAM1Q9NWV8 329 aa11.88□□□□□ -0.51
AC004828.1-201ENST00000555303 RIC1Q4ADV7 1423 aa11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 NFKBIEO00221 500 aa11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 SRGNP10124 158 aa11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 PIP4K2AP48426 406 aaPredicted RBP11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 APLP1P51693 650 aa11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 FSTL1Q12841 308 aa11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 TPTE2Q6XPS3 522 aa11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 ZNF622Q969S3 477 aaKnown RBP eCLIP11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 MASTLQ96GX5 879 aa11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 IBTKQ9P2D0 1353 aaPredicted RBP11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 ANKRD36CQ5JPF3 1778 aa11.87□□□□□ -0.51
AC004828.1-201ENST00000555303 KLRG2A4D1S0 409 aaPredicted RBP11.86□□□□□ -0.51
AC004828.1-201ENST00000555303 ERVV-1B6SEH8 477 aa11.86□□□□□ -0.51
AC004828.1-201ENST00000555303 MIS18AQ9NYP9 233 aa11.86□□□□□ -0.51
AC004828.1-201ENST00000555303 NIP7Q9Y221 180 aaKnown RBP eCLIP11.86□□□□□ -0.51
AC004828.1-201ENST00000555303 GLTPD2A6NH11 291 aa11.85□□□□□ -0.51
AC004828.1-201ENST00000555303 C21orf2O43822 256 aa11.85□□□□□ -0.51
AC004828.1-201ENST00000555303 NPR1P16066 1061 aa11.85□□□□□ -0.51
AC004828.1-201ENST00000555303 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
AC004828.1-201ENST00000555303 KIF6Q6ZMV9 814 aa11.85□□□□□ -0.51
AC004828.1-201ENST00000555303 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
AC004828.1-201ENST00000555303 TAOK3Q9H2K8 898 aa11.85□□□□□ -0.51
AC004828.1-201ENST00000555303 MAP3K15Q6ZN16 1313 aa11.85□□□□□ -0.51
AC004828.1-201ENST00000555303 RIPK4P57078 832 aa11.84□□□□□ -0.51
AC004828.1-201ENST00000555303 CCDC24Q8N4L8 307 aa11.84□□□□□ -0.51
AC004828.1-201ENST00000555303 TSPYL4Q9UJ04 414 aa11.84□□□□□ -0.51
AC004828.1-201ENST00000555303 VEGFAP15692 232 aaPredicted RBP11.83□□□□□ -0.52
AC004828.1-201ENST00000555303 TMPOP42166 694 aaKnown RBP11.83□□□□□ -0.52
AC004828.1-201ENST00000555303 PRELPP51888 382 aa11.83□□□□□ -0.52
AC004828.1-201ENST00000555303 DDX10Q13206 875 aaKnown RBP11.83□□□□□ -0.52
AC004828.1-201ENST00000555303 DPY19L2Q6NUT2 758 aa11.83□□□□□ -0.52
AC004828.1-201ENST00000555303 THUMPD2Q9BTF0 503 aaKnown RBP11.83□□□□□ -0.52
AC004828.1-201ENST00000555303 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
AC004828.1-201ENST00000555303 SCN4AP35499 1836 aa11.83□□□□□ -0.52
AC004828.1-201ENST00000555303 ALDH1B1P30837 517 aa11.82□□□□□ -0.52
AC004828.1-201ENST00000555303 WDR43Q15061 677 aaKnown RBP eCLIP11.82□□□□□ -0.52
AC004828.1-201ENST00000555303 HLFQ16534 295 aa11.82□□□□□ -0.52
AC004828.1-201ENST00000555303 ERFEQ4G0M1 354 aa11.82□□□□□ -0.52
AC004828.1-201ENST00000555303 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
AC004828.1-201ENST00000555303 SMC1BQ8NDV3 1235 aa11.82□□□□□ -0.52
AC004828.1-201ENST00000555303 GTF2E1P29083 439 aaPredicted RBP11.81□□□□□ -0.52
AC004828.1-201ENST00000555303 CRY2Q49AN0 593 aa11.81□□□□□ -0.52
AC004828.1-201ENST00000555303 C7orf43Q8WVR3 580 aa11.81□□□□□ -0.52
AC004828.1-201ENST00000555303 RUNDC1Q96C34 613 aa11.81□□□□□ -0.52
AC004828.1-201ENST00000555303 RRP7AQ9Y3A4 280 aaKnown RBP11.81□□□□□ -0.52
AC004828.1-201ENST00000555303 RNF123Q5XPI4 1314 aa11.81□□□□□ -0.52
AC004828.1-201ENST00000555303 MYL6BP14649 208 aa11.8□□□□□ -0.52
AC004828.1-201ENST00000555303 PARP10Q53GL7 1025 aa11.8□□□□□ -0.52
AC004828.1-201ENST00000555303 GIGYF2Q6Y7W6 1299 aaKnown RBP11.8□□□□□ -0.52
AC004828.1-201ENST00000555303 TTLL7Q6ZT98 887 aa11.8□□□□□ -0.52
AC004828.1-201ENST00000555303 RTKN2Q8IZC4 609 aa11.8□□□□□ -0.52
AC004828.1-201ENST00000555303 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
AC004828.1-201ENST00000555303 ABCC12Q96J65 1359 aa11.79□□□□□ -0.52
AC004828.1-201ENST00000555303 FKBP4Q02790 459 aaKnown RBP eCLIP11.79□□□□□ -0.52
AC004828.1-201ENST00000555303 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
AC004828.1-201ENST00000555303 CC2D2BQ6DHV5 1058 aa11.79□□□□□ -0.52
AC004828.1-201ENST00000555303 ZNF34Q8IZ26 560 aa11.79□□□□□ -0.52
AC004828.1-201ENST00000555303 NGEFQ8N5V2 710 aa11.79□□□□□ -0.52
AC004828.1-201ENST00000555303 UBN2Q6ZU65 1347 aa11.79□□□□□ -0.52
AC004828.1-201ENST00000555303 SNED1Q8TER0 1413 aa11.78□□□□□ -0.52
AC004828.1-201ENST00000555303 LAMB2P55268 1798 aa11.78□□□□□ -0.52
AC004828.1-201ENST00000555303 FAM177BA6PVY3 158 aa11.78□□□□□ -0.52
AC004828.1-201ENST00000555303 HOXB7P09629 217 aa11.78□□□□□ -0.52
AC004828.1-201ENST00000555303 PDIA6Q15084 440 aa11.78□□□□□ -0.52
AC004828.1-201ENST00000555303 HSP90AB3PQ58FF7 597 aa11.78□□□□□ -0.52
AC004828.1-201ENST00000555303 LRP10Q7Z4F1 713 aa11.78□□□□□ -0.52
AC004828.1-201ENST00000555303 PPP1R42Q7Z4L9 355 aa11.78□□□□□ -0.52
AC004828.1-201ENST00000555303 ZBTB3Q9H5J0 574 aa11.78□□□□□ -0.52
AC004828.1-201ENST00000555303 PRKRIP1Q9H875 184 aaPredicted RBP11.78□□□□□ -0.52
AC004828.1-201ENST00000555303 PCNTO95613 3336 aa11.77□□□□□ -0.52
AC004828.1-201ENST00000555303 IQCA1LA6NCM1 817 aa11.77□□□□□ -0.53
AC004828.1-201ENST00000555303 CHL1O00533 1208 aa11.77□□□□□ -0.53
AC004828.1-201ENST00000555303 NTSR2O95665 410 aa11.77□□□□□ -0.53
AC004828.1-201ENST00000555303 HOXA10P31260 410 aaPredicted RBP11.77□□□□□ -0.53
AC004828.1-201ENST00000555303 DNAJC5GQ8N7S2 189 aa11.77□□□□□ -0.53
AC004828.1-201ENST00000555303 RPGRQ92834 1020 aaKnown RBP11.77□□□□□ -0.53
AC004828.1-201ENST00000555303 PSMD1Q99460 953 aa11.77□□□□□ -0.53
AC004828.1-201ENST00000555303 EIF2S2P20042 333 aaKnown RBP11.76□□□□□ -0.53
AC004828.1-201ENST00000555303 GPTP24298 496 aa11.76□□□□□ -0.53
AC004828.1-201ENST00000555303 NUTM1Q86Y26 1132 aa11.76□□□□□ -0.53
AC004828.1-201ENST00000555303 CCDC146Q8IYE0 955 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms