RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 DDX58O95786 925 aaKnown RBP13.95□□□□□ -0.18
SHMT2-218ENST00000555213 ANXA1P04083 346 aa13.95□□□□□ -0.18
SHMT2-218ENST00000555213 XAGE3Q8WTP9 111 aa13.95□□□□□ -0.18
SHMT2-218ENST00000555213 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-218ENST00000555213 MAP3K15Q6ZN16 1313 aa13.94□□□□□ -0.18
SHMT2-218ENST00000555213 BCORQ6W2J9 1755 aa13.94□□□□□ -0.18
SHMT2-218ENST00000555213 ERVV-1B6SEH8 477 aa13.94□□□□□ -0.18
SHMT2-218ENST00000555213 BCAR3O75815 825 aa13.94□□□□□ -0.18
SHMT2-218ENST00000555213 CAMTA2O94983 1202 aa13.94□□□□□ -0.18
SHMT2-218ENST00000555213 AIMP1Q12904 312 aaKnown RBP13.94□□□□□ -0.18
SHMT2-218ENST00000555213 CLEC4GQ6UXB4 293 aa13.94□□□□□ -0.18
SHMT2-218ENST00000555213 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
SHMT2-218ENST00000555213 PPP1R1BQ9UD71 204 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-218ENST00000555213 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
SHMT2-218ENST00000555213 MMP10P09238 476 aa13.93□□□□□ -0.18
SHMT2-218ENST00000555213 RARSP54136 660 aaKnown RBP13.93□□□□□ -0.18
SHMT2-218ENST00000555213 IRX6P78412 446 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-218ENST00000555213 FKBP8Q14318 412 aa13.93□□□□□ -0.18
SHMT2-218ENST00000555213 LRP10Q7Z4F1 713 aa13.93□□□□□ -0.18
SHMT2-218ENST00000555213 ZBTB3Q9H5J0 574 aa13.93□□□□□ -0.18
SHMT2-218ENST00000555213 TCERG1O14776 1098 aaKnown RBP13.92□□□□□ -0.18
SHMT2-218ENST00000555213 RRP1P56182 461 aaKnown RBP13.92□□□□□ -0.18
SHMT2-218ENST00000555213 HSP90AB3PQ58FF7 597 aa13.92□□□□□ -0.18
SHMT2-218ENST00000555213 TTLL7Q6ZT98 887 aa13.92□□□□□ -0.18
SHMT2-218ENST00000555213 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
SHMT2-218ENST00000555213 CARMIL3Q8ND23 1372 aa13.92□□□□□ -0.18
SHMT2-218ENST00000555213 ATP10DQ9P241 1426 aa13.91□□□□□ -0.18
SHMT2-218ENST00000555213 PLIN1O60240 522 aa13.91□□□□□ -0.18
SHMT2-218ENST00000555213 PTGER2P43116 358 aa13.91□□□□□ -0.18
SHMT2-218ENST00000555213 ANKRD13DQ6ZTN6 518 aa13.91□□□□□ -0.18
SHMT2-218ENST00000555213 PLBD2Q8NHP8 589 aa13.91□□□□□ -0.18
SHMT2-218ENST00000555213 SETDB2Q96T68 719 aa13.91□□□□□ -0.18
SHMT2-218ENST00000555213 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
SHMT2-218ENST00000555213 NPHP1O15259 732 aa13.9□□□□□ -0.18
SHMT2-218ENST00000555213 FLIIQ13045 1269 aa13.9□□□□□ -0.18
SHMT2-218ENST00000555213 NFIXQ14938 502 aa13.9□□□□□ -0.18
SHMT2-218ENST00000555213 ALDH1L2Q3SY69 923 aa13.9□□□□□ -0.18
SHMT2-218ENST00000555213 BICDL1Q6ZP65 573 aa13.9□□□□□ -0.18
SHMT2-218ENST00000555213 RIC3Q7Z5B4 369 aa13.9□□□□□ -0.18
SHMT2-218ENST00000555213 SMC4Q9NTJ3 1288 aa13.9□□□□□ -0.18
SHMT2-218ENST00000555213 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
SHMT2-218ENST00000555213 FKBP5Q13451 457 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-218ENST00000555213 TBC1D9BQ66K14 1250 aa13.89□□□□□ -0.19
SHMT2-218ENST00000555213 GIGYF2Q6Y7W6 1299 aaKnown RBP13.89□□□□□ -0.19
SHMT2-218ENST00000555213 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
SHMT2-218ENST00000555213 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
SHMT2-218ENST00000555213 NIP7Q9Y221 180 aaKnown RBP eCLIP13.89□□□□□ -0.19
SHMT2-218ENST00000555213 HLFQ16534 295 aa13.88□□□□□ -0.19
SHMT2-218ENST00000555213 C20orf194Q5TEA3 1177 aa13.88□□□□□ -0.19
SHMT2-218ENST00000555213 SSH1Q8WYL5 1049 aa13.88□□□□□ -0.19
SHMT2-218ENST00000555213 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
SHMT2-218ENST00000555213 POLRMTO00411 1230 aaKnown RBP13.87□□□□□ -0.19
SHMT2-218ENST00000555213 TM4SF1P30408 202 aa13.87□□□□□ -0.19
SHMT2-218ENST00000555213 DDR1Q08345 913 aa13.87□□□□□ -0.19
SHMT2-218ENST00000555213 NEXNQ0ZGT2 675 aa13.87□□□□□ -0.19
SHMT2-218ENST00000555213 PARP10Q53GL7 1025 aa13.87□□□□□ -0.19
SHMT2-218ENST00000555213 KSR2Q6VAB6 950 aa13.87□□□□□ -0.19
SHMT2-218ENST00000555213 NBPF5PQ86XG9 351 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-218ENST00000555213 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
SHMT2-218ENST00000555213 CNBD1Q8NA66 436 aa13.87□□□□□ -0.19
SHMT2-218ENST00000555213 BCL2L13Q9BXK5 485 aa13.87□□□□□ -0.19
SHMT2-218ENST00000555213 PTPRCP08575 1304 aa13.87□□□□□ -0.19
SHMT2-218ENST00000555213 IBTKQ9P2D0 1353 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-218ENST00000555213 CACNA1FO60840 1977 aa13.86□□□□□ -0.19
SHMT2-218ENST00000555213 SERPINB2P05120 415 aa13.86□□□□□ -0.19
SHMT2-218ENST00000555213 GPTP24298 496 aa13.86□□□□□ -0.19
SHMT2-218ENST00000555213 TCIRG1Q13488 830 aa13.86□□□□□ -0.19
SHMT2-218ENST00000555213 G2E3Q7L622 706 aa13.86□□□□□ -0.19
SHMT2-218ENST00000555213 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
SHMT2-218ENST00000555213 NYXQ9GZU5 481 aa13.86□□□□□ -0.19
SHMT2-218ENST00000555213 MAP3K2Q9Y2U5 619 aa13.86□□□□□ -0.19
SHMT2-218ENST00000555213 ARFGEF2Q9Y6D5 1785 aa13.86□□□□□ -0.19
SHMT2-218ENST00000555213 C10orf71Q711Q0 1435 aa13.85□□□□□ -0.19
SHMT2-218ENST00000555213 PI4KAP2A4QPH2 592 aa13.85□□□□□ -0.19
SHMT2-218ENST00000555213 YY1P25490 414 aa13.85□□□□□ -0.19
SHMT2-218ENST00000555213 GTF2E1P29083 439 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-218ENST00000555213 BRPF1P55201 1214 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-218ENST00000555213 ST5P78524 1137 aa13.85□□□□□ -0.19
SHMT2-218ENST00000555213 ERICH6BQ5W0A0 696 aa13.85□□□□□ -0.19
SHMT2-218ENST00000555213 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
SHMT2-218ENST00000555213 ZNF34Q8IZ26 560 aa13.85□□□□□ -0.19
SHMT2-218ENST00000555213 PI4KAP1Q8N8J0 262 aa13.85□□□□□ -0.19
SHMT2-218ENST00000555213 ADCY9O60503 1353 aa13.84□□□□□ -0.19
SHMT2-218ENST00000555213 TPTE2Q6XPS3 522 aa13.84□□□□□ -0.19
SHMT2-218ENST00000555213 DNAAF4Q8WXU2 420 aa13.84□□□□□ -0.19
SHMT2-218ENST00000555213 METTL22Q9BUU2 404 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-218ENST00000555213 TNNQ9UQP3 1299 aa13.84□□□□□ -0.19
SHMT2-218ENST00000555213 CD2APQ9Y5K6 639 aa13.84□□□□□ -0.19
SHMT2-218ENST00000555213 ANKRD36CQ5JPF3 1778 aa13.83□□□□□ -0.19
SHMT2-218ENST00000555213 NUP98P52948 1817 aa13.83□□□□□ -0.2
SHMT2-218ENST00000555213 IPO8O15397 1037 aaKnown RBP13.83□□□□□ -0.2
SHMT2-218ENST00000555213 NEFLP07196 543 aa13.83□□□□□ -0.2
SHMT2-218ENST00000555213 MYD88Q99836 296 aa13.83□□□□□ -0.2
SHMT2-218ENST00000555213 UTP14AQ9BVJ6 771 aaKnown RBP13.83□□□□□ -0.2
SHMT2-218ENST00000555213 UBN2Q6ZU65 1347 aa13.83□□□□□ -0.2
SHMT2-218ENST00000555213 FAM177BA6PVY3 158 aa13.82□□□□□ -0.2
SHMT2-218ENST00000555213 ATP5J2-PTCD1G3V325 749 aa13.82□□□□□ -0.2
SHMT2-218ENST00000555213 PRR5LQ6MZQ0 368 aa13.82□□□□□ -0.2
SHMT2-218ENST00000555213 NLRP10Q86W26 655 aa13.82□□□□□ -0.2
SHMT2-218ENST00000555213 EXOC6Q8TAG9 804 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms