RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 STK31Q9BXU1 1019 aa27.57■■■□□ 2
SDR39U1-208ENST00000554698 MAP3K15Q6ZN16 1313 aa27.56■■■□□ 2
SDR39U1-208ENST00000554698 POLD1P28340 1107 aa27.56■■■□□ 2
SDR39U1-208ENST00000554698 CLEC4GQ6UXB4 293 aa27.56■■■□□ 2
SDR39U1-208ENST00000554698 KIF6Q6ZMV9 814 aa27.56■■■□□ 2
SDR39U1-208ENST00000554698 SRCAPQ6ZRS2 3230 aa27.55■■■□□ 2
SDR39U1-208ENST00000554698 TCERG1O14776 1098 aaKnown RBP27.55■■■□□ 2
SDR39U1-208ENST00000554698 BCORQ6W2J9 1755 aa27.54■■■□□ 2
SDR39U1-208ENST00000554698 MMP10P09238 476 aa27.54■■■□□ 2
SDR39U1-208ENST00000554698 CT47B1P0C2W7 299 aaPredicted RBP27.54■■■□□ 2
SDR39U1-208ENST00000554698 TM4SF1P30408 202 aa27.53■■■□□ 2
SDR39U1-208ENST00000554698 AIMP1Q12904 312 aaKnown RBP27.53■■■□□ 2
SDR39U1-208ENST00000554698 ZNF428Q96B54 188 aa27.53■■■□□ 2
SDR39U1-208ENST00000554698 PHAXQ9H814 394 aaKnown RBP27.53■■■□□ 2
SDR39U1-208ENST00000554698 ZNF652Q9Y2D9 606 aa27.53■■■□□ 2
SDR39U1-208ENST00000554698 SLC4A2P04920 1241 aa27.52■■■□□ 2
SDR39U1-208ENST00000554698 NFIXQ14938 502 aa27.52■■■□□ 2
SDR39U1-208ENST00000554698 HLFQ16534 295 aa27.52■■■□□ 2
SDR39U1-208ENST00000554698 ZBTB3Q9H5J0 574 aa27.52■■■□□ 2
SDR39U1-208ENST00000554698 TBC1D9BQ66K14 1250 aa27.51■■□□□ 1.99
SDR39U1-208ENST00000554698 DDR1Q08345 913 aa27.5■■□□□ 1.99
SDR39U1-208ENST00000554698 GIGYF2Q6Y7W6 1299 aaKnown RBP27.49■■□□□ 1.99
SDR39U1-208ENST00000554698 PLBD2Q8NHP8 589 aa27.49■■□□□ 1.99
SDR39U1-208ENST00000554698 POLRMTO00411 1230 aaKnown RBP27.48■■□□□ 1.99
SDR39U1-208ENST00000554698 ANKRD13DQ6ZTN6 518 aa27.48■■□□□ 1.99
SDR39U1-208ENST00000554698 ATP10DQ9P241 1426 aa27.48■■□□□ 1.99
SDR39U1-208ENST00000554698 G2E3Q7L622 706 aa27.48■■□□□ 1.99
SDR39U1-208ENST00000554698 PARP3Q9Y6F1 533 aa27.48■■□□□ 1.99
SDR39U1-208ENST00000554698 BICDL1Q6ZP65 573 aa27.46■■□□□ 1.99
SDR39U1-208ENST00000554698 FLIIQ13045 1269 aa27.45■■□□□ 1.98
SDR39U1-208ENST00000554698 ALDH1L2Q3SY69 923 aa27.45■■□□□ 1.98
SDR39U1-208ENST00000554698 SSH1Q8WYL5 1049 aa27.45■■□□□ 1.98
SDR39U1-208ENST00000554698 YTHDC1Q96MU7 727 aaKnown RBP27.45■■□□□ 1.98
SDR39U1-208ENST00000554698 SETDB2Q96T68 719 aa27.45■■□□□ 1.98
SDR39U1-208ENST00000554698 PPP1R1BQ9UD71 204 aaPredicted RBP27.45■■□□□ 1.98
SDR39U1-208ENST00000554698 CARMIL3Q8ND23 1372 aa27.45■■□□□ 1.98
SDR39U1-208ENST00000554698 DDX58O95786 925 aaKnown RBP27.44■■□□□ 1.98
SDR39U1-208ENST00000554698 NIP7Q9Y221 180 aaKnown RBP eCLIP27.44■■□□□ 1.98
SDR39U1-208ENST00000554698 ZNF34Q8IZ26 560 aa27.43■■□□□ 1.98
SDR39U1-208ENST00000554698 MRPL50Q8N5N7 158 aaKnown RBP27.43■■□□□ 1.98
SDR39U1-208ENST00000554698 HSP90AB3PQ58FF7 597 aa27.42■■□□□ 1.98
SDR39U1-208ENST00000554698 RIC3Q7Z5B4 369 aa27.42■■□□□ 1.98
SDR39U1-208ENST00000554698 ADCY9O60503 1353 aa27.41■■□□□ 1.98
SDR39U1-208ENST00000554698 SERPINB2P05120 415 aa27.41■■□□□ 1.98
SDR39U1-208ENST00000554698 TCIRG1Q13488 830 aa27.41■■□□□ 1.98
SDR39U1-208ENST00000554698 KSR2Q6VAB6 950 aa27.41■■□□□ 1.98
SDR39U1-208ENST00000554698 UBN2Q6ZU65 1347 aa27.4■■□□□ 1.98
SDR39U1-208ENST00000554698 PI4KAP2A4QPH2 592 aa27.4■■□□□ 1.98
SDR39U1-208ENST00000554698 RARSP54136 660 aaKnown RBP27.4■■□□□ 1.98
SDR39U1-208ENST00000554698 PI4KAP1Q8N8J0 262 aa27.4■■□□□ 1.98
SDR39U1-208ENST00000554698 NUP98P52948 1817 aa27.4■■□□□ 1.98
SDR39U1-208ENST00000554698 GPTP24298 496 aa27.39■■□□□ 1.98
SDR39U1-208ENST00000554698 FKBP5Q13451 457 aaPredicted RBP27.39■■□□□ 1.98
SDR39U1-208ENST00000554698 BCL2L13Q9BXK5 485 aa27.39■■□□□ 1.98
SDR39U1-208ENST00000554698 C10orf71Q711Q0 1435 aa27.39■■□□□ 1.97
SDR39U1-208ENST00000554698 SMC4Q9NTJ3 1288 aa27.38■■□□□ 1.97
SDR39U1-208ENST00000554698 MAP3K2Q9Y2U5 619 aa27.38■■□□□ 1.97
SDR39U1-208ENST00000554698 CACNA1FO60840 1977 aa27.38■■□□□ 1.97
SDR39U1-208ENST00000554698 NRXN2Q9P2S2 1712 aa27.38■■□□□ 1.97
SDR39U1-208ENST00000554698 BRPF1P55201 1214 aaPredicted RBP27.37■■□□□ 1.97
SDR39U1-208ENST00000554698 PARP10Q53GL7 1025 aa27.37■■□□□ 1.97
SDR39U1-208ENST00000554698 FHDC1Q9C0D6 1143 aaPredicted RBP27.37■■□□□ 1.97
SDR39U1-208ENST00000554698 CD2APQ9Y5K6 639 aa27.37■■□□□ 1.97
SDR39U1-208ENST00000554698 NBPF5PQ86XG9 351 aaPredicted RBP27.36■■□□□ 1.97
SDR39U1-208ENST00000554698 ISCA1Q9BUE6 129 aa27.36■■□□□ 1.97
SDR39U1-208ENST00000554698 METTL22Q9BUU2 404 aaPredicted RBP27.36■■□□□ 1.97
SDR39U1-208ENST00000554698 ARFGEF2Q9Y6D5 1785 aa27.36■■□□□ 1.97
SDR39U1-208ENST00000554698 IBTKQ9P2D0 1353 aaPredicted RBP27.36■■□□□ 1.97
SDR39U1-208ENST00000554698 TRIM28Q13263 835 aaKnown RBP27.35■■□□□ 1.97
SDR39U1-208ENST00000554698 SUSD4Q5VX71 490 aa27.35■■□□□ 1.97
SDR39U1-208ENST00000554698 PRR5LQ6MZQ0 368 aa27.35■■□□□ 1.97
SDR39U1-208ENST00000554698 NLRP10Q86W26 655 aa27.35■■□□□ 1.97
SDR39U1-208ENST00000554698 CNBD1Q8NA66 436 aa27.35■■□□□ 1.97
SDR39U1-208ENST00000554698 TPTE2Q6XPS3 522 aa27.34■■□□□ 1.97
SDR39U1-208ENST00000554698 PTPRCP08575 1304 aa27.33■■□□□ 1.97
SDR39U1-208ENST00000554698 ATP5J2-PTCD1G3V325 749 aa27.33■■□□□ 1.97
SDR39U1-208ENST00000554698 DNAAF4Q8WXU2 420 aa27.33■■□□□ 1.97
SDR39U1-208ENST00000554698 MYD88Q99836 296 aa27.33■■□□□ 1.97
SDR39U1-208ENST00000554698 SYT17Q9BSW7 474 aa27.33■■□□□ 1.97
SDR39U1-208ENST00000554698 NYXQ9GZU5 481 aa27.33■■□□□ 1.97
SDR39U1-208ENST00000554698 AFDNP55196 1824 aaKnown RBP27.32■■□□□ 1.96
SDR39U1-208ENST00000554698 NTSR2O95665 410 aa27.32■■□□□ 1.96
SDR39U1-208ENST00000554698 KLHL34Q8N239 644 aa27.32■■□□□ 1.96
SDR39U1-208ENST00000554698 ANKRD36CQ5JPF3 1778 aa27.32■■□□□ 1.96
SDR39U1-208ENST00000554698 FAM177BA6PVY3 158 aa27.31■■□□□ 1.96
SDR39U1-208ENST00000554698 PPP1R42Q7Z4L9 355 aa27.31■■□□□ 1.96
SDR39U1-208ENST00000554698 F6X3S4 739 aa27.3■■□□□ 1.96
SDR39U1-208ENST00000554698 NEXNQ0ZGT2 675 aa27.3■■□□□ 1.96
SDR39U1-208ENST00000554698 UTP14AQ9BVJ6 771 aaKnown RBP27.3■■□□□ 1.96
SDR39U1-208ENST00000554698 RNF123Q5XPI4 1314 aa27.29■■□□□ 1.96
SDR39U1-208ENST00000554698 IGKV5-2P06315 115 aa27.29■■□□□ 1.96
SDR39U1-208ENST00000554698 ST5P78524 1137 aa27.29■■□□□ 1.96
SDR39U1-208ENST00000554698 KIF13BQ9NQT8 1826 aa27.29■■□□□ 1.96
SDR39U1-208ENST00000554698 KIF16BQ96L93 1317 aa27.29■■□□□ 1.96
SDR39U1-208ENST00000554698 NPHP1O15259 732 aa27.28■■□□□ 1.96
SDR39U1-208ENST00000554698 BCAR3O75815 825 aa27.28■■□□□ 1.96
SDR39U1-208ENST00000554698 CCDC24Q8N4L8 307 aa27.28■■□□□ 1.96
SDR39U1-208ENST00000554698 CCDC191Q8NCU4 936 aa27.28■■□□□ 1.96
SDR39U1-208ENST00000554698 NLGN2Q8NFZ4 835 aa27.28■■□□□ 1.96
SDR39U1-208ENST00000554698 BRIP1Q9BX63 1249 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms