RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 PLCB2Q00722 1185 aa10.95□□□□□ -0.66
ACTN1-212ENST00000554158 CC2D1BQ5T0F9 858 aaKnown RBP10.95□□□□□ -0.66
ACTN1-212ENST00000554158 TBC1D9BQ66K14 1250 aa10.95□□□□□ -0.66
ACTN1-212ENST00000554158 CCER1Q8TC90 406 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-212ENST00000554158 FMNL2Q96PY5 1086 aa10.95□□□□□ -0.66
ACTN1-212ENST00000554158 TBC1D2BQ9UPU7 963 aa10.95□□□□□ -0.66
ACTN1-212ENST00000554158 BCORQ6W2J9 1755 aa10.95□□□□□ -0.66
ACTN1-212ENST00000554158 HEG1Q9ULI3 1381 aa10.94□□□□□ -0.66
ACTN1-212ENST00000554158 IL6STP40189 918 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-212ENST00000554158 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-212ENST00000554158 CNGB1Q14028 1251 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-212ENST00000554158 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
ACTN1-212ENST00000554158 ZNF790Q6PG37 636 aa10.94□□□□□ -0.66
ACTN1-212ENST00000554158 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
ACTN1-212ENST00000554158 BCL2L12Q9HB09 334 aa10.94□□□□□ -0.66
ACTN1-212ENST00000554158 ZNF652Q9Y2D9 606 aa10.94□□□□□ -0.66
ACTN1-212ENST00000554158 STYK1Q6J9G0 422 aa10.93□□□□□ -0.66
ACTN1-212ENST00000554158 PRR5LQ6MZQ0 368 aa10.93□□□□□ -0.66
ACTN1-212ENST00000554158 MASTLQ96GX5 879 aa10.93□□□□□ -0.66
ACTN1-212ENST00000554158 CREBZFQ9NS37 354 aa10.93□□□□□ -0.66
ACTN1-212ENST00000554158 LTBP3Q9NS15 1303 aa10.92□□□□□ -0.66
ACTN1-212ENST00000554158 PCNTO95613 3336 aa10.92□□□□□ -0.66
ACTN1-212ENST00000554158 PRPF40BQ6NWY9 871 aaKnown RBP10.92□□□□□ -0.66
ACTN1-212ENST00000554158 NBPF5PQ86XG9 351 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-212ENST00000554158 DZIP3Q86Y13 1208 aaKnown RBP10.92□□□□□ -0.66
ACTN1-212ENST00000554158 CCDC24Q8N4L8 307 aa10.92□□□□□ -0.66
ACTN1-212ENST00000554158 RTF1Q92541 710 aaKnown RBP10.92□□□□□ -0.66
ACTN1-212ENST00000554158 ZNF496Q96IT1 587 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-212ENST00000554158 CFAP53Q96M91 514 aa10.92□□□□□ -0.66
ACTN1-212ENST00000554158 MKRN1Q9UHC7 482 aaKnown RBP10.92□□□□□ -0.66
ACTN1-212ENST00000554158 BTBD11A6QL63 1104 aa10.91□□□□□ -0.66
ACTN1-212ENST00000554158 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-212ENST00000554158 CCDC93Q567U6 631 aa10.91□□□□□ -0.66
ACTN1-212ENST00000554158 CLEC11AQ9Y240 323 aa10.91□□□□□ -0.66
ACTN1-212ENST00000554158 DDNO94850 711 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-212ENST00000554158 A1BGP04217 495 aa10.9□□□□□ -0.66
ACTN1-212ENST00000554158 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-212ENST00000554158 LDHDQ86WU2 507 aa10.9□□□□□ -0.66
ACTN1-212ENST00000554158 NUDCQ9Y266 331 aa10.9□□□□□ -0.66
ACTN1-212ENST00000554158 KIF7Q2M1P5 1343 aa10.89□□□□□ -0.67
ACTN1-212ENST00000554158 SRGNP10124 158 aa10.89□□□□□ -0.67
ACTN1-212ENST00000554158 NPR1P16066 1061 aa10.89□□□□□ -0.67
ACTN1-212ENST00000554158 TPTE2Q6XPS3 522 aa10.89□□□□□ -0.67
ACTN1-212ENST00000554158 POTECB2RU33 542 aa10.88□□□□□ -0.67
ACTN1-212ENST00000554158 CAMTA2O94983 1202 aa10.88□□□□□ -0.67
ACTN1-212ENST00000554158 NEFMP07197 916 aa10.88□□□□□ -0.67
ACTN1-212ENST00000554158 CLEC4GQ6UXB4 293 aa10.88□□□□□ -0.67
ACTN1-212ENST00000554158 RTKN2Q8IZC4 609 aa10.88□□□□□ -0.67
ACTN1-212ENST00000554158 IL17REQ8NFR9 667 aa10.88□□□□□ -0.67
ACTN1-212ENST00000554158 NUP98P52948 1817 aa10.88□□□□□ -0.67
ACTN1-212ENST00000554158 TRPM7Q96QT4 1865 aa10.87□□□□□ -0.67
ACTN1-212ENST00000554158 TMEM88BA6NKF7 163 aa10.87□□□□□ -0.67
ACTN1-212ENST00000554158 FAM177BA6PVY3 158 aa10.87□□□□□ -0.67
ACTN1-212ENST00000554158 SNRPA1P09661 255 aaKnown RBP10.87□□□□□ -0.67
ACTN1-212ENST00000554158 CTCFP49711 727 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-212ENST00000554158 FKBP4Q02790 459 aaKnown RBP eCLIP10.87□□□□□ -0.67
ACTN1-212ENST00000554158 PNMA8AQ86V59 439 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-212ENST00000554158 JDP2Q8WYK2 163 aa10.87□□□□□ -0.67
ACTN1-212ENST00000554158 HACL1Q9UJ83 578 aa10.87□□□□□ -0.67
ACTN1-212ENST00000554158 NIP7Q9Y221 180 aaKnown RBP eCLIP10.87□□□□□ -0.67
ACTN1-212ENST00000554158 CNTNAP1P78357 1384 aa10.87□□□□□ -0.67
ACTN1-212ENST00000554158 LAMB4A4D0S4 1761 aa10.86□□□□□ -0.67
ACTN1-212ENST00000554158 LMOD1P29536 600 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-212ENST00000554158 ALDH1B1P30837 517 aa10.86□□□□□ -0.67
ACTN1-212ENST00000554158 PRKAR2BP31323 418 aa10.86□□□□□ -0.67
ACTN1-212ENST00000554158 TMX4Q9H1E5 349 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-212ENST00000554158 TAF1DQ9H5J8 278 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-212ENST00000554158 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
ACTN1-212ENST00000554158 POTEJP0CG39 1038 aa10.85□□□□□ -0.67
ACTN1-212ENST00000554158 EPHX2P34913 555 aa10.85□□□□□ -0.67
ACTN1-212ENST00000554158 PIP4K2AP48426 406 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-212ENST00000554158 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-212ENST00000554158 BEGAINQ9BUH8 593 aa10.85□□□□□ -0.67
ACTN1-212ENST00000554158 NYXQ9GZU5 481 aa10.85□□□□□ -0.67
ACTN1-212ENST00000554158 PRDM10Q9NQV6 1147 aa10.85□□□□□ -0.67
ACTN1-212ENST00000554158 ZNF277Q9NRM2 450 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-212ENST00000554158 ABT1Q9ULW3 272 aaKnown RBP10.85□□□□□ -0.67
ACTN1-212ENST00000554158 ZBTB12Q9Y330 459 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-212ENST00000554158 DLG5Q8TDM6 1919 aa10.85□□□□□ -0.67
ACTN1-212ENST00000554158 FOXN1O15353 648 aa10.84□□□□□ -0.67
ACTN1-212ENST00000554158 U2AF1L5P0DN76 240 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-212ENST00000554158 IARSP41252 1262 aaKnown RBP10.84□□□□□ -0.67
ACTN1-212ENST00000554158 EIF6P56537 245 aaKnown RBP10.84□□□□□ -0.67
ACTN1-212ENST00000554158 U2AF1Q01081 240 aaKnown RBP eCLIP10.84□□□□□ -0.67
ACTN1-212ENST00000554158 PAXIP1Q6ZW49 1069 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-212ENST00000554158 RPGRQ92834 1020 aaKnown RBP10.84□□□□□ -0.67
ACTN1-212ENST00000554158 USP16Q9Y5T5 823 aa10.84□□□□□ -0.67
ACTN1-212ENST00000554158 CEMIPQ8WUJ3 1361 aa10.84□□□□□ -0.67
ACTN1-212ENST00000554158 NPC1L1Q9UHC9 1359 aa10.84□□□□□ -0.67
ACTN1-212ENST00000554158 COL3A1P02461 1466 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-212ENST00000554158 PASKQ96RG2 1323 aa10.84□□□□□ -0.67
ACTN1-212ENST00000554158 KCNQ3O43525 872 aa10.83□□□□□ -0.68
ACTN1-212ENST00000554158 VEGFBP49765 207 aa10.83□□□□□ -0.68
ACTN1-212ENST00000554158 MAP2K1Q02750 393 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-212ENST00000554158 DEFB115Q30KQ5 88 aa10.83□□□□□ -0.68
ACTN1-212ENST00000554158 KIF6Q6ZMV9 814 aa10.83□□□□□ -0.68
ACTN1-212ENST00000554158 RNF123Q5XPI4 1314 aa10.83□□□□□ -0.68
ACTN1-212ENST00000554158 ZNF541Q9H0D2 1346 aa10.83□□□□□ -0.68
ACTN1-212ENST00000554158 RGL2O15211 777 aa10.82□□□□□ -0.68
ACTN1-212ENST00000554158 PER1O15534 1290 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms