RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 MYBL1P10243 752 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 SESN3P58005 492 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 UVSSAQ2YD98 709 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 DDX54Q8TDD1 881 aaKnown RBP10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 NACADO15069 1562 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 FKBP5Q13451 457 aaPredicted RBP10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 FERMT3Q86UX7 667 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 ATRIPQ8WXE1 791 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 GBP3Q9H0R5 595 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 IQSEC3Q9UPP2 1182 aaPredicted RBP10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 CCDC7Q96M83 1385 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 A0A087WUV0 522 aaPredicted RBP10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 RAB3GAP1Q15042 981 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 ODF2Q5BJF6 829 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 PCMTD1Q96MG8 357 aaPredicted RBP10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 CEP104O60308 925 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 SLMAPQ14BN4 828 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 WDR78Q5VTH9 848 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 ZKSCAN2Q63HK3 967 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 CABS1Q96KC9 395 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 TMEM110Q86TL2 294 aa10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 MKRN1Q9UHC7 482 aaKnown RBP10.39□□□□□ -0.75
GTF2A1-203ENST00000553612 SKILP12757 684 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 GCFC2P16383 781 aaKnown RBP10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 STK3Q13188 491 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 C16orf87Q6PH81 154 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 MAP4K4O95819 1239 aaPredicted RBP10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 TSC22D3Q99576 134 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 DMPKQ09013 629 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 CCDC30Q5VVM6 783 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 RASSF8Q8NHQ8 419 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 KIF15Q9NS87 1388 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 VIMP08670 466 aaKnown RBP10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 DZIP1LQ8IYY4 767 aaKnown RBP10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 ATP6V1DQ9Y5K8 247 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 CAPN15O75808 1086 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 XBP1P17861 261 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 TMF1P82094 1093 aa10.38□□□□□ -0.75
GTF2A1-203ENST00000553612 DESP17661 470 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 SNX1Q13596 522 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 FKBP15Q5T1M5 1219 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 RHBDL2Q9NX52 303 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 RABL2BQ9UNT1 228 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 CCDC189A1A4V9 331 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 EVCP57679 992 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 USP4Q13107 963 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 MAFGO15525 162 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 CCDC183Q5T5S1 534 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 SDF4Q9BRK5 362 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 SAMM50Q9Y512 469 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 TULP2O00295 520 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 CREB3O43889 395 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 PCK1P35558 622 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 MPHOSPH9Q99550 1183 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 TMA7Q9Y2S6 64 aaKnown RBP10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 DEUP1Q05D60 604 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 TMED1Q13445 227 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 ZNF280DQ6N043 979 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 AFAP1L1Q8TED9 768 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 TRAIPQ9BWF2 469 aa10.37□□□□□ -0.75
GTF2A1-203ENST00000553612 LRMPQ12912 555 aa10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 CCDC171Q6TFL3 1326 aa10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 CD248Q9HCU0 757 aa10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 ABL2P42684 1182 aa10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 SPDYE1Q8NFV5 336 aaPredicted RBP10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 BICC1Q9H694 974 aaKnown RBP10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 FCHSD2O94868 740 aa10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 SERPINC1P01008 464 aa10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 MIS18AQ9NYP9 233 aa10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 SNCBQ16143 134 aa10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 SDCCAG8Q86SQ7 713 aaPredicted RBP10.36□□□□□ -0.75
GTF2A1-203ENST00000553612 PEX14O75381 377 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 RHOXF2BP0C7M4 288 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 ZNF445P59923 1031 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 SEPT6Q14141 434 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 B4GALNT2Q8NHY0 566 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 PARD3BQ8TEW8 1205 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 RHOXF2Q9BQY4 288 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 NANOGNBQ7Z5D8 188 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 HOOK1Q9UJC3 728 aaKnown RBP10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 DNA2P51530 1060 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 FNBP4Q8N3X1 1017 aaPredicted RBP10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 PNISRQ8TF01 805 aaKnown RBP10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 HELLSQ9NRZ9 838 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 PUF60Q9UHX1 559 aaKnown RBP10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 NDUFAB1O14561 156 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 CDC45O75419 566 aa10.35□□□□□ -0.75
GTF2A1-203ENST00000553612 PNMA6AP0CW24 399 aaPredicted RBP10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 CLCN6P51797 869 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 HSP90AA4PQ58FG1 418 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 PNMA8AQ86V59 439 aaPredicted RBP10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 CARD6Q9BX69 1037 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 RABL2AQ9UBK7 228 aaPredicted RBP10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 SASH1O94885 1247 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 LMBRD2Q68DH5 695 aaPredicted RBP10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 PDE11AQ9HCR9 933 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 AATFQ9NY61 560 aaKnown RBP eCLIP10.34□□□□□ -0.755e-24■□□□□ 11.1
GTF2A1-203ENST00000553612 ZSCAN12O43309 604 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms