RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 GNAI2P04899 355 aa22.08■■□□□ 1.13
PSEN1-206ENST00000553447 RXRBP28702 533 aa22.08■■□□□ 1.13
PSEN1-206ENST00000553447 NEXNQ0ZGT2 675 aa22.08■■□□□ 1.13
PSEN1-206ENST00000553447 FAM196AQ6ZSG2 479 aa22.08■■□□□ 1.13
PSEN1-206ENST00000553447 TAF1LQ8IZX4 1826 aa22.08■■□□□ 1.12
PSEN1-206ENST00000553447 RPAP2Q8IXW5 612 aaPredicted RBP22.07■■□□□ 1.12
PSEN1-206ENST00000553447 MYD88Q99836 296 aa22.07■■□□□ 1.12
PSEN1-206ENST00000553447 RGS17Q9UGC6 210 aaPredicted RBP22.07■■□□□ 1.12
PSEN1-206ENST00000553447 ZBTB1Q9Y2K1 713 aa22.07■■□□□ 1.12
PSEN1-206ENST00000553447 UBTFL1P0CB47 393 aaPredicted RBP22.06■■□□□ 1.12
PSEN1-206ENST00000553447 CWF19L2Q2TBE0 894 aaKnown RBP22.06■■□□□ 1.12
PSEN1-206ENST00000553447 CEP85Q6P2H3 762 aa22.06■■□□□ 1.12
PSEN1-206ENST00000553447 SIRT2Q8IXJ6 389 aa22.06■■□□□ 1.12
PSEN1-206ENST00000553447 ANKRD44Q8N8A2 993 aa22.06■■□□□ 1.12
PSEN1-206ENST00000553447 BCL11BQ9C0K0 894 aaPredicted RBP22.06■■□□□ 1.12
PSEN1-206ENST00000553447 CCDC87Q9NVE4 849 aa22.06■■□□□ 1.12
PSEN1-206ENST00000553447 ANKRD36CQ5JPF3 1778 aa22.06■■□□□ 1.12
PSEN1-206ENST00000553447 IGKV5-2P06315 115 aa22.05■■□□□ 1.12
PSEN1-206ENST00000553447 IL6STP40189 918 aaPredicted RBP22.05■■□□□ 1.12
PSEN1-206ENST00000553447 INTS5Q6P9B9 1019 aaKnown RBP22.05■■□□□ 1.12
PSEN1-206ENST00000553447 ZNF330Q9Y3S2 320 aaPredicted RBP22.05■■□□□ 1.12
PSEN1-206ENST00000553447 NEURL1BA8MQ27 555 aa22.04■■□□□ 1.12
PSEN1-206ENST00000553447 CRKLP46109 303 aaKnown RBP22.04■■□□□ 1.12
PSEN1-206ENST00000553447 KIF6Q6ZMV9 814 aa22.04■■□□□ 1.12
PSEN1-206ENST00000553447 NUP98P52948 1817 aa22.03■■□□□ 1.12
PSEN1-206ENST00000553447 SMC5Q8IY18 1101 aa22.03■■□□□ 1.12
PSEN1-206ENST00000553447 ZBTB3Q9H5J0 574 aa22.03■■□□□ 1.12
PSEN1-206ENST00000553447 LRRFIP2Q9Y608 721 aaKnown RBP22.03■■□□□ 1.12
PSEN1-206ENST00000553447 NBPF7P0C2Y1 421 aaPredicted RBP22.02■■□□□ 1.12
PSEN1-206ENST00000553447 C9orf78Q9NZ63 289 aaPredicted RBP22.02■■□□□ 1.12
PSEN1-206ENST00000553447 UTYO14607 1347 aa22.02■■□□□ 1.12
PSEN1-206ENST00000553447 GRM8O00222 908 aa22.01■■□□□ 1.11
PSEN1-206ENST00000553447 POTEAQ6S8J7 498 aa22.01■■□□□ 1.11
PSEN1-206ENST00000553447 LINC00116Q8NCU8 138 aa22.01■■□□□ 1.11
PSEN1-206ENST00000553447 MAP3K15Q6ZN16 1313 aa22.01■■□□□ 1.11
PSEN1-206ENST00000553447 EIF5P55010 431 aaKnown RBP22■■□□□ 1.11
PSEN1-206ENST00000553447 GCKRQ14397 625 aa22■■□□□ 1.11
PSEN1-206ENST00000553447 GCC1Q96CN9 775 aa22■■□□□ 1.11
PSEN1-206ENST00000553447 CNTNAP4Q9C0A0 1308 aa22■■□□□ 1.11
PSEN1-206ENST00000553447 BCORQ6W2J9 1755 aa21.99■■□□□ 1.11
PSEN1-206ENST00000553447 ATP5J2-PTCD1G3V325 749 aa21.99■■□□□ 1.11
PSEN1-206ENST00000553447 CCNL1Q9UK58 526 aaPredicted RBP21.99■■□□□ 1.11
PSEN1-206ENST00000553447 HDAC5Q9UQL6 1122 aa21.99■■□□□ 1.11
PSEN1-206ENST00000553447 HMMRO75330 724 aa21.98■■□□□ 1.11
PSEN1-206ENST00000553447 ATP8B2P98198 1209 aa21.98■■□□□ 1.11
PSEN1-206ENST00000553447 NPM2Q86SE8 214 aaKnown RBP21.98■■□□□ 1.11
PSEN1-206ENST00000553447 SKAP1Q86WV1 359 aa21.98■■□□□ 1.11
PSEN1-206ENST00000553447 PDZRN3Q9UPQ7 1066 aa21.98■■□□□ 1.11
PSEN1-206ENST00000553447 TRIM37O94972 964 aa21.97■■□□□ 1.11
PSEN1-206ENST00000553447 KCNQ4P56696 695 aa21.97■■□□□ 1.11
PSEN1-206ENST00000553447 TCIRG1Q13488 830 aa21.97■■□□□ 1.11
PSEN1-206ENST00000553447 DZIP3Q86Y13 1208 aaKnown RBP21.97■■□□□ 1.11
PSEN1-206ENST00000553447 C4BP0C0L5 1744 aa21.97■■□□□ 1.11
PSEN1-206ENST00000553447 ERVV-1B6SEH8 477 aa21.96■■□□□ 1.11
PSEN1-206ENST00000553447 RC3H1Q5TC82 1133 aaKnown RBP21.96■■□□□ 1.11
PSEN1-206ENST00000553447 GIGYF2Q6Y7W6 1299 aaKnown RBP21.96■■□□□ 1.11
PSEN1-206ENST00000553447 ARXQ96QS3 562 aa21.96■■□□□ 1.11
PSEN1-206ENST00000553447 ISCA1Q9BUE6 129 aa21.96■■□□□ 1.11
PSEN1-206ENST00000553447 DCTPP1Q9H773 170 aa21.96■■□□□ 1.11
PSEN1-206ENST00000553447 CCDC191Q8NCU4 936 aa21.95■■□□□ 1.1
PSEN1-206ENST00000553447 CWC25Q9NXE8 425 aaPredicted RBP21.95■■□□□ 1.1
PSEN1-206ENST00000553447 COL15A1P39059 1388 aa21.95■■□□□ 1.1
PSEN1-206ENST00000553447 TNS1Q9HBL0 1735 aaKnown RBP21.94■■□□□ 1.1
PSEN1-206ENST00000553447 PNMA6EA0A0J9YXQ4 647 aa21.94■■□□□ 1.1
PSEN1-206ENST00000553447 TRIM28Q13263 835 aaKnown RBP21.94■■□□□ 1.1
PSEN1-206ENST00000553447 HLFQ16534 295 aa21.94■■□□□ 1.1
PSEN1-206ENST00000553447 HSP90AB3PQ58FF7 597 aa21.94■■□□□ 1.1
PSEN1-206ENST00000553447 SUCLG2Q96I99 432 aa21.94■■□□□ 1.1
PSEN1-206ENST00000553447 TBC1D2BQ9UPU7 963 aa21.94■■□□□ 1.1
PSEN1-206ENST00000553447 SCN7AQ01118 1682 aa21.93■■□□□ 1.1
PSEN1-206ENST00000553447 A0A087WZG4 1122 aa21.92■■□□□ 1.1
PSEN1-206ENST00000553447 NUCB1Q02818 461 aa21.92■■□□□ 1.1
PSEN1-206ENST00000553447 MTX1Q13505 466 aa21.92■■□□□ 1.1
PSEN1-206ENST00000553447 PPP1R42Q7Z4L9 355 aa21.92■■□□□ 1.1
PSEN1-206ENST00000553447 SSH3Q8TE77 659 aa21.92■■□□□ 1.1
PSEN1-206ENST00000553447 KAZALD1Q96I82 304 aa21.92■■□□□ 1.1
PSEN1-206ENST00000553447 H7C1W4 665 aa21.91■■□□□ 1.1
PSEN1-206ENST00000553447 RGS3P49796 1198 aa21.91■■□□□ 1.1
PSEN1-206ENST00000553447 CASP7P55210 303 aa21.91■■□□□ 1.1
PSEN1-206ENST00000553447 POLA2Q14181 598 aa21.91■■□□□ 1.1
PSEN1-206ENST00000553447 UBE3BQ7Z3V4 1068 aa21.91■■□□□ 1.1
PSEN1-206ENST00000553447 RPS6KA4O75676 772 aa21.9■■□□□ 1.1
PSEN1-206ENST00000553447 CAMTA2O94983 1202 aa21.9■■□□□ 1.1
PSEN1-206ENST00000553447 SLC27A3Q5K4L6 730 aa21.9■■□□□ 1.1
PSEN1-206ENST00000553447 C4AP0C0L4 1744 aa21.89■■□□□ 1.1
PSEN1-206ENST00000553447 SRGAP3O43295 1099 aa21.89■■□□□ 1.09
PSEN1-206ENST00000553447 ANKRD45Q5TZF3 282 aa21.89■■□□□ 1.09
PSEN1-206ENST00000553447 CHD1LQ86WJ1 897 aa21.89■■□□□ 1.09
PSEN1-206ENST00000553447 JARID2Q92833 1246 aaPredicted RBP21.89■■□□□ 1.09
PSEN1-206ENST00000553447 BICC1Q9H694 974 aaKnown RBP21.89■■□□□ 1.09
PSEN1-206ENST00000553447 UBR3Q6ZT12 1888 aa21.89■■□□□ 1.09
PSEN1-206ENST00000553447 RGPD3A6NKT7 1758 aaPredicted RBP21.89■■□□□ 1.09
PSEN1-206ENST00000553447 RGPD4Q7Z3J3 1758 aa21.89■■□□□ 1.09
PSEN1-206ENST00000553447 LRRC4BQ9NT99 713 aa21.88■■□□□ 1.09
PSEN1-206ENST00000553447 GNPATO15228 680 aa21.87■■□□□ 1.09
PSEN1-206ENST00000553447 NLRP10Q86W26 655 aa21.87■■□□□ 1.09
PSEN1-206ENST00000553447 ZNF34Q8IZ26 560 aa21.87■■□□□ 1.09
PSEN1-206ENST00000553447 LNPKQ9C0E8 428 aa21.87■■□□□ 1.09
PSEN1-206ENST00000553447 GPTP24298 496 aa21.86■■□□□ 1.09
PSEN1-206ENST00000553447 PDE4AP27815 886 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms