RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 ERBB4Q15303 1308 aa12.77□□□□□ -0.36
LETMD1-234ENST00000552645 MMP10P09238 476 aa12.77□□□□□ -0.36
LETMD1-234ENST00000552645 SLFN5Q08AF3 891 aa12.77□□□□□ -0.36
LETMD1-234ENST00000552645 PDIA6Q15084 440 aa12.77□□□□□ -0.36
LETMD1-234ENST00000552645 CCDC30Q5VVM6 783 aa12.77□□□□□ -0.36
LETMD1-234ENST00000552645 KIF6Q6ZMV9 814 aa12.77□□□□□ -0.36
LETMD1-234ENST00000552645 ZBTB3Q9H5J0 574 aa12.77□□□□□ -0.36
LETMD1-234ENST00000552645 DDX21Q9NR30 783 aaKnown RBP eCLIP12.77□□□□□ -0.36
LETMD1-234ENST00000552645 DBF4Q9UBU7 674 aaPredicted RBP12.77□□□□□ -0.36
LETMD1-234ENST00000552645 BCORQ6W2J9 1755 aa12.77□□□□□ -0.36
LETMD1-234ENST00000552645 TTLL7Q6ZT98 887 aa12.77□□□□□ -0.37
LETMD1-234ENST00000552645 STK31Q9BXU1 1019 aa12.77□□□□□ -0.37
LETMD1-234ENST00000552645 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
LETMD1-234ENST00000552645 NUP98P52948 1817 aa12.76□□□□□ -0.37
LETMD1-234ENST00000552645 CAMTA2O94983 1202 aa12.76□□□□□ -0.37
LETMD1-234ENST00000552645 COPS6Q7L5N1 327 aa12.76□□□□□ -0.37
LETMD1-234ENST00000552645 XAGE3Q8WTP9 111 aa12.76□□□□□ -0.37
LETMD1-234ENST00000552645 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
LETMD1-234ENST00000552645 CHMP4AQ9BY43 222 aa12.75□□□□□ -0.37
LETMD1-234ENST00000552645 BCL2L12Q9HB09 334 aa12.75□□□□□ -0.37
LETMD1-234ENST00000552645 ZNF652Q9Y2D9 606 aa12.75□□□□□ -0.37
LETMD1-234ENST00000552645 PARP3Q9Y6F1 533 aa12.75□□□□□ -0.37
LETMD1-234ENST00000552645 VAMP4O75379 141 aa12.74□□□□□ -0.37
LETMD1-234ENST00000552645 HLFQ16534 295 aa12.74□□□□□ -0.37
LETMD1-234ENST00000552645 TBC1D9BQ66K14 1250 aa12.74□□□□□ -0.37
LETMD1-234ENST00000552645 HYPKQ9NX55 129 aa12.74□□□□□ -0.37
LETMD1-234ENST00000552645 CACNA1FO60840 1977 aa12.74□□□□□ -0.37
LETMD1-234ENST00000552645 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
LETMD1-234ENST00000552645 NPHP1O15259 732 aa12.73□□□□□ -0.37
LETMD1-234ENST00000552645 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
LETMD1-234ENST00000552645 NFIXQ14938 502 aa12.73□□□□□ -0.37
LETMD1-234ENST00000552645 PHAXQ9H814 394 aaKnown RBP12.73□□□□□ -0.37
LETMD1-234ENST00000552645 ZBED9Q6R2W3 1325 aa12.73□□□□□ -0.37
LETMD1-234ENST00000552645 AFDNP55196 1824 aaKnown RBP12.73□□□□□ -0.37
LETMD1-234ENST00000552645 FAM177BA6PVY3 158 aa12.73□□□□□ -0.37
LETMD1-234ENST00000552645 DDR1Q08345 913 aa12.73□□□□□ -0.37
LETMD1-234ENST00000552645 LRP10Q7Z4F1 713 aa12.73□□□□□ -0.37
LETMD1-234ENST00000552645 SETDB2Q96T68 719 aa12.73□□□□□ -0.37
LETMD1-234ENST00000552645 FHDC1Q9C0D6 1143 aaPredicted RBP12.73□□□□□ -0.37
LETMD1-234ENST00000552645 GPTP24298 496 aa12.72□□□□□ -0.37
LETMD1-234ENST00000552645 NIP7Q9Y221 180 aaKnown RBP eCLIP12.72□□□□□ -0.37
LETMD1-234ENST00000552645 ERVV-1B6SEH8 477 aa12.71□□□□□ -0.37
LETMD1-234ENST00000552645 TM4SF1P30408 202 aa12.71□□□□□ -0.37
LETMD1-234ENST00000552645 CLEC4GQ6UXB4 293 aa12.71□□□□□ -0.37
LETMD1-234ENST00000552645 ZNF428Q96B54 188 aa12.71□□□□□ -0.37
LETMD1-234ENST00000552645 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.37
LETMD1-234ENST00000552645 POLRMTO00411 1230 aaKnown RBP12.7□□□□□ -0.38
LETMD1-234ENST00000552645 SERPINB2P05120 415 aa12.7□□□□□ -0.38
LETMD1-234ENST00000552645 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
LETMD1-234ENST00000552645 G2E3Q7L622 706 aa12.7□□□□□ -0.38
LETMD1-234ENST00000552645 RIC3Q7Z5B4 369 aa12.7□□□□□ -0.38
LETMD1-234ENST00000552645 TRMT2AQ8IZ69 625 aaKnown RBP12.7□□□□□ -0.38
LETMD1-234ENST00000552645 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
LETMD1-234ENST00000552645 ANKRD36CQ5JPF3 1778 aa12.7□□□□□ -0.38
LETMD1-234ENST00000552645 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
LETMD1-234ENST00000552645 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
LETMD1-234ENST00000552645 CCDC24Q8N4L8 307 aa12.7□□□□□ -0.38
LETMD1-234ENST00000552645 DDX58O95786 925 aaKnown RBP12.69□□□□□ -0.38
LETMD1-234ENST00000552645 GTF2E1P29083 439 aaPredicted RBP12.69□□□□□ -0.38
LETMD1-234ENST00000552645 FKBP5Q13451 457 aaPredicted RBP12.69□□□□□ -0.38
LETMD1-234ENST00000552645 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
LETMD1-234ENST00000552645 PLBD2Q8NHP8 589 aa12.69□□□□□ -0.38
LETMD1-234ENST00000552645 FLIIQ13045 1269 aa12.68□□□□□ -0.38
LETMD1-234ENST00000552645 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
LETMD1-234ENST00000552645 SYT17Q9BSW7 474 aa12.68□□□□□ -0.38
LETMD1-234ENST00000552645 WWC3Q9ULE0 1092 aa12.68□□□□□ -0.38
LETMD1-234ENST00000552645 N4BP2Q86UW6 1770 aaPredicted RBP12.68□□□□□ -0.38
LETMD1-234ENST00000552645 ATP5J2-PTCD1G3V325 749 aa12.67□□□□□ -0.38
LETMD1-234ENST00000552645 NLGN2Q8NFZ4 835 aa12.67□□□□□ -0.38
LETMD1-234ENST00000552645 SMC4Q9NTJ3 1288 aa12.67□□□□□ -0.38
LETMD1-234ENST00000552645 MAP3K2Q9Y2U5 619 aa12.67□□□□□ -0.38
LETMD1-234ENST00000552645 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 PI4KAP2A4QPH2 592 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 HSP90AB3PQ58FF7 597 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 PI4KAP1Q8N8J0 262 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 SSH1Q8WYL5 1049 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 MYD88Q99836 296 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 CD2APQ9Y5K6 639 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 KIF13BQ9NQT8 1826 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 UBN2Q6ZU65 1347 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 NRXN2Q9P2S2 1712 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 RGL2O15211 777 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 ST5P78524 1137 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 TCIRG1Q13488 830 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 PRR5LQ6MZQ0 368 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 KSR2Q6VAB6 950 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 TPTE2Q6XPS3 522 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 ZNF34Q8IZ26 560 aa12.66□□□□□ -0.38
LETMD1-234ENST00000552645 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
LETMD1-234ENST00000552645 C10orf71Q711Q0 1435 aa12.65□□□□□ -0.38
LETMD1-234ENST00000552645 SUSD4Q5VX71 490 aa12.65□□□□□ -0.38
LETMD1-234ENST00000552645 ADCY9O60503 1353 aa12.64□□□□□ -0.39
LETMD1-234ENST00000552645 ANKRD31Q8N7Z5 1873 aa12.64□□□□□ -0.39
LETMD1-234ENST00000552645 A0A0G2JLW4 131 aa12.64□□□□□ -0.39
LETMD1-234ENST00000552645 F6X3S4 739 aa12.64□□□□□ -0.39
LETMD1-234ENST00000552645 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
LETMD1-234ENST00000552645 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
LETMD1-234ENST00000552645 MRPL50Q8N5N7 158 aaKnown RBP12.64□□□□□ -0.39
LETMD1-234ENST00000552645 NYXQ9GZU5 481 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 758.4 ms