RNA–Protein interactions for RNA: ENST00000551043.5

CNOT2-227, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-227ENST00000551043 RIC3Q7Z5B4 369 aa23.07■■□□□ 1.28
CNOT2-227ENST00000551043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.07■■□□□ 1.28
CNOT2-227ENST00000551043 USP42Q9H9J4 1324 aaKnown RBP23.07■■□□□ 1.28
CNOT2-227ENST00000551043 IFIT2P09913 472 aaKnown RBP23.07■■□□□ 1.28
CNOT2-227ENST00000551043 PHKG2P15735 406 aa23.07■■□□□ 1.28
CNOT2-227ENST00000551043 TATP17735 454 aaPredicted RBP23.07■■□□□ 1.28
CNOT2-227ENST00000551043 CHRNA2Q15822 529 aa23.07■■□□□ 1.28
CNOT2-227ENST00000551043 IGKV5-2P06315 115 aa23.06■■□□□ 1.28
CNOT2-227ENST00000551043 ECHDC1Q9NTX5 307 aa23.06■■□□□ 1.28
CNOT2-227ENST00000551043 EPB41L2O43491 1005 aaKnown RBP23.06■■□□□ 1.28
CNOT2-227ENST00000551043 AACSQ86V21 672 aa23.06■■□□□ 1.28
CNOT2-227ENST00000551043 RASEFQ8IZ41 740 aa23.06■■□□□ 1.28
CNOT2-227ENST00000551043 SNX14Q9Y5W7 946 aa23.06■■□□□ 1.28
CNOT2-227ENST00000551043 CAMTA1Q9Y6Y1 1673 aa23.05■■□□□ 1.28
CNOT2-227ENST00000551043 KDM6AO15550 1401 aaPredicted RBP23.05■■□□□ 1.28
CNOT2-227ENST00000551043 KIAA1211Q6ZU35 1233 aa23.05■■□□□ 1.28
CNOT2-227ENST00000551043 INTS4Q96HW7 963 aaKnown RBP23.05■■□□□ 1.28
CNOT2-227ENST00000551043 HDAC5Q9UQL6 1122 aa23.05■■□□□ 1.28
CNOT2-227ENST00000551043 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
CNOT2-227ENST00000551043 GPT2Q8TD30 523 aa23.05■■□□□ 1.28
CNOT2-227ENST00000551043 ZNF496Q96IT1 587 aaPredicted RBP23.05■■□□□ 1.28
CNOT2-227ENST00000551043 DIAPH3Q9NSV4 1193 aa23.05■■□□□ 1.28
CNOT2-227ENST00000551043 TMEM94Q12767 1356 aa23.04■■□□□ 1.28
CNOT2-227ENST00000551043 BRD1O95696 1058 aa23.04■■□□□ 1.28
CNOT2-227ENST00000551043 ERC1Q8IUD2 1116 aa23.04■■□□□ 1.28
CNOT2-227ENST00000551043 XAGE3Q8WTP9 111 aa23.04■■□□□ 1.28
CNOT2-227ENST00000551043 SASH1O94885 1247 aa23.03■■□□□ 1.28
CNOT2-227ENST00000551043 COPS6Q7L5N1 327 aa23.03■■□□□ 1.28
CNOT2-227ENST00000551043 LARP6Q9BRS8 491 aaKnown RBP23.03■■□□□ 1.28
CNOT2-227ENST00000551043 SIL1Q9H173 461 aa23.03■■□□□ 1.28
CNOT2-227ENST00000551043 ZSCAN23Q3MJ62 389 aa23.03■■□□□ 1.28
CNOT2-227ENST00000551043 KLHDC4Q8TBB5 520 aa23.03■■□□□ 1.28
CNOT2-227ENST00000551043 UTYO14607 1347 aa23.03■■□□□ 1.28
CNOT2-227ENST00000551043 SIPA1L3O60292 1781 aaPredicted RBP23.02■■□□□ 1.28
CNOT2-227ENST00000551043 G3BP1Q13283 466 aaKnown RBP eCLIP23.02■■□□□ 1.28
CNOT2-227ENST00000551043 IFNL2Q8IZJ0 200 aa23.02■■□□□ 1.28
CNOT2-227ENST00000551043 LARP1Q6PKG0 1096 aaKnown RBP23.02■■□□□ 1.28
CNOT2-227ENST00000551043 EAF2Q96CJ1 260 aaPredicted RBP23.02■■□□□ 1.28
CNOT2-227ENST00000551043 GPATCH3Q96I76 525 aa23.02■■□□□ 1.28
CNOT2-227ENST00000551043 CCDC8Q9H0W5 538 aaPredicted RBP23.02■■□□□ 1.28
CNOT2-227ENST00000551043 RBM27Q9P2N5 1060 aaKnown RBP23.02■■□□□ 1.28
CNOT2-227ENST00000551043 USP16Q9Y5T5 823 aa23.02■■□□□ 1.28
CNOT2-227ENST00000551043 MST1RQ04912 1400 aa23.02■■□□□ 1.28
CNOT2-227ENST00000551043 MEGF6O75095 1541 aa23.02■■□□□ 1.28
CNOT2-227ENST00000551043 KIF1AQ12756 1690 aa23.02■■□□□ 1.27
CNOT2-227ENST00000551043 PTH1RQ03431 593 aa23.01■■□□□ 1.27
CNOT2-227ENST00000551043 NEXNQ0ZGT2 675 aa23.01■■□□□ 1.27
CNOT2-227ENST00000551043 FOXD4L6Q3SYB3 417 aaPredicted RBP23.01■■□□□ 1.27
CNOT2-227ENST00000551043 FOXD4L3Q6VB84 417 aaPredicted RBP23.01■■□□□ 1.27
CNOT2-227ENST00000551043 JARID2Q92833 1246 aaPredicted RBP23.01■■□□□ 1.27
CNOT2-227ENST00000551043 MYD88Q99836 296 aa23.01■■□□□ 1.27
CNOT2-227ENST00000551043 NSFL1CQ9UNZ2 370 aaKnown RBP23.01■■□□□ 1.27
CNOT2-227ENST00000551043 NEURL1BA8MQ27 555 aa23■■□□□ 1.27
CNOT2-227ENST00000551043 CYP27B1O15528 508 aa23■■□□□ 1.27
CNOT2-227ENST00000551043 CPA1P15085 419 aa23■■□□□ 1.27
CNOT2-227ENST00000551043 ALS2Q96Q42 1657 aa23■■□□□ 1.27
CNOT2-227ENST00000551043 ADAMTS7Q9UKP4 1686 aa22.99■■□□□ 1.27
CNOT2-227ENST00000551043 NASPP49321 788 aaPredicted RBP22.99■■□□□ 1.27
CNOT2-227ENST00000551043 GCKRQ14397 625 aa22.99■■□□□ 1.27
CNOT2-227ENST00000551043 TLR7Q9NYK1 1049 aaKnown RBP22.99■■□□□ 1.27
CNOT2-227ENST00000551043 AK2P54819 239 aa22.98■■□□□ 1.27
CNOT2-227ENST00000551043 ZNF445P59923 1031 aa22.98■■□□□ 1.27
CNOT2-227ENST00000551043 EPHA10Q5JZY3 1008 aa22.98■■□□□ 1.27
CNOT2-227ENST00000551043 TTC5Q8N0Z6 440 aa22.98■■□□□ 1.27
CNOT2-227ENST00000551043 RUFY2Q8WXA3 655 aa22.98■■□□□ 1.27
CNOT2-227ENST00000551043 TTC14Q96N46 770 aa22.98■■□□□ 1.27
CNOT2-227ENST00000551043 EVI5LQ96CN4 794 aa22.98■■□□□ 1.27
CNOT2-227ENST00000551043 ANO8Q9HCE9 1232 aaPredicted RBP22.98■■□□□ 1.27
CNOT2-227ENST00000551043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.98■■□□□ 1.272e-6■■□□□ 12.1
CNOT2-227ENST00000551043 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.98■■□□□ 1.27
CNOT2-227ENST00000551043 ANKRD13DQ6ZTN6 518 aa22.97■■□□□ 1.27
CNOT2-227ENST00000551043 METTL22Q9BUU2 404 aaPredicted RBP22.97■■□□□ 1.27
CNOT2-227ENST00000551043 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
CNOT2-227ENST00000551043 CASTP20810 708 aaKnown RBP22.97■■□□□ 1.27
CNOT2-227ENST00000551043 DCAF5Q96JK2 942 aa22.97■■□□□ 1.27
CNOT2-227ENST00000551043 LMTK3Q96Q04 1460 aa22.96■■□□□ 1.27
CNOT2-227ENST00000551043 PRPF40BQ6NWY9 871 aaKnown RBP22.96■■□□□ 1.27
CNOT2-227ENST00000551043 RUFY3Q7L099 469 aa22.96■■□□□ 1.27
CNOT2-227ENST00000551043 TMEM63CQ9P1W3 806 aa22.96■■□□□ 1.27
CNOT2-227ENST00000551043 ADCK5Q3MIX3 580 aa22.95■■□□□ 1.26
CNOT2-227ENST00000551043 LRP10Q7Z4F1 713 aa22.95■■□□□ 1.26
CNOT2-227ENST00000551043 FAM227BQ96M60 508 aa22.95■■□□□ 1.26
CNOT2-227ENST00000551043 BOLA2Q9H3K6 86 aa22.95■■□□□ 1.26
CNOT2-227ENST00000551043 PRIM1P49642 420 aaKnown RBP22.94■■□□□ 1.26
CNOT2-227ENST00000551043 C5P01031 1676 aa22.94■■□□□ 1.26
CNOT2-227ENST00000551043 DDX54Q8TDD1 881 aaKnown RBP22.94■■□□□ 1.26
CNOT2-227ENST00000551043 TRIM44Q96DX7 344 aaPredicted RBP22.94■■□□□ 1.26
CNOT2-227ENST00000551043 LIMCH1Q9UPQ0 1083 aa22.94■■□□□ 1.26
CNOT2-227ENST00000551043 CRYBG1Q9Y4K1 1723 aa22.94■■□□□ 1.26
CNOT2-227ENST00000551043 GDPD2Q9HCC8 539 aa22.93■■□□□ 1.26
CNOT2-227ENST00000551043 SCN11AQ9UI33 1791 aa22.93■■□□□ 1.26
CNOT2-227ENST00000551043 CABP4P57796 275 aa22.93■■□□□ 1.26
CNOT2-227ENST00000551043 CADPS2Q86UW7 1296 aa22.93■■□□□ 1.26
CNOT2-227ENST00000551043 JAKMIP1Q96N16 626 aaKnown RBP22.93■■□□□ 1.26
CNOT2-227ENST00000551043 FMNL2Q96PY5 1086 aa22.93■■□□□ 1.26
CNOT2-227ENST00000551043 ATP5J2-PTCD1G3V325 749 aa22.92■■□□□ 1.26
CNOT2-227ENST00000551043 DTNBO60941 627 aa22.92■■□□□ 1.26
CNOT2-227ENST00000551043 PTCD1O75127 700 aaKnown RBP22.92■■□□□ 1.26
CNOT2-227ENST00000551043 NMIQ13287 307 aaPredicted RBP22.92■■□□□ 1.26
CNOT2-227ENST00000551043 RBSNQ9H1K0 784 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms