RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 LRP10Q7Z4F1 713 aa20.89■□□□□ 0.93
CHMP1A-209ENST00000550872 XAGE3Q8WTP9 111 aa20.89■□□□□ 0.93
CHMP1A-209ENST00000550872 HYPKQ9NX55 129 aa20.89■□□□□ 0.93
CHMP1A-209ENST00000550872 TRMT2AQ8IZ69 625 aaKnown RBP20.88■□□□□ 0.93
CHMP1A-209ENST00000550872 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
CHMP1A-209ENST00000550872 ZBED9Q6R2W3 1325 aa20.87■□□□□ 0.93
CHMP1A-209ENST00000550872 BICDL1Q6ZP65 573 aa20.87■□□□□ 0.93
CHMP1A-209ENST00000550872 ZNF652Q9Y2D9 606 aa20.87■□□□□ 0.93
CHMP1A-209ENST00000550872 PARP3Q9Y6F1 533 aa20.87■□□□□ 0.93
CHMP1A-209ENST00000550872 MAP3K15Q6ZN16 1313 aa20.86■□□□□ 0.93
CHMP1A-209ENST00000550872 TM4SF1P30408 202 aa20.86■□□□□ 0.93
CHMP1A-209ENST00000550872 NFIXQ14938 502 aa20.86■□□□□ 0.93
CHMP1A-209ENST00000550872 CLEC4GQ6UXB4 293 aa20.86■□□□□ 0.93
CHMP1A-209ENST00000550872 ZBTB3Q9H5J0 574 aa20.86■□□□□ 0.93
CHMP1A-209ENST00000550872 COL24A1Q17RW2 1714 aa20.86■□□□□ 0.93
CHMP1A-209ENST00000550872 UTRNP46939 3433 aa20.85■□□□□ 0.93
CHMP1A-209ENST00000550872 ERVV-1B6SEH8 477 aa20.85■□□□□ 0.93
CHMP1A-209ENST00000550872 HLFQ16534 295 aa20.85■□□□□ 0.93
CHMP1A-209ENST00000550872 TBC1D9BQ66K14 1250 aa20.85■□□□□ 0.93
CHMP1A-209ENST00000550872 PHAXQ9H814 394 aaKnown RBP20.85■□□□□ 0.93
CHMP1A-209ENST00000550872 RGL2O15211 777 aa20.84■□□□□ 0.93
CHMP1A-209ENST00000550872 SLC4A2P04920 1241 aa20.84■□□□□ 0.93
CHMP1A-209ENST00000550872 DDR1Q08345 913 aa20.83■□□□□ 0.93
CHMP1A-209ENST00000550872 KLHL34Q8N239 644 aa20.83■□□□□ 0.93
CHMP1A-209ENST00000550872 POLRMTO00411 1230 aaKnown RBP20.82■□□□□ 0.92
CHMP1A-209ENST00000550872 ANKRD13DQ6ZTN6 518 aa20.82■□□□□ 0.92
CHMP1A-209ENST00000550872 SETDB2Q96T68 719 aa20.82■□□□□ 0.92
CHMP1A-209ENST00000550872 SCN7AQ01118 1682 aa20.82■□□□□ 0.92
CHMP1A-209ENST00000550872 GIGYF2Q6Y7W6 1299 aaKnown RBP20.81■□□□□ 0.92
CHMP1A-209ENST00000550872 PLBD2Q8NHP8 589 aa20.81■□□□□ 0.92
CHMP1A-209ENST00000550872 NIP7Q9Y221 180 aaKnown RBP eCLIP20.81■□□□□ 0.92
CHMP1A-209ENST00000550872 BCORQ6W2J9 1755 aa20.81■□□□□ 0.92
CHMP1A-209ENST00000550872 SERPINB2P05120 415 aa20.8■□□□□ 0.92
CHMP1A-209ENST00000550872 SYT17Q9BSW7 474 aa20.8■□□□□ 0.92
CHMP1A-209ENST00000550872 G2E3Q7L622 706 aa20.79■□□□□ 0.92
CHMP1A-209ENST00000550872 FHDC1Q9C0D6 1143 aaPredicted RBP20.79■□□□□ 0.92
CHMP1A-209ENST00000550872 DDX58O95786 925 aaKnown RBP20.78■□□□□ 0.92
CHMP1A-209ENST00000550872 CT47B1P0C2W7 299 aaPredicted RBP20.78■□□□□ 0.92
CHMP1A-209ENST00000550872 RIC3Q7Z5B4 369 aa20.78■□□□□ 0.92
CHMP1A-209ENST00000550872 NUP98P52948 1817 aa20.78■□□□□ 0.92
CHMP1A-209ENST00000550872 CARMIL3Q8ND23 1372 aa20.77■□□□□ 0.92
CHMP1A-209ENST00000550872 GPTP24298 496 aa20.77■□□□□ 0.92
CHMP1A-209ENST00000550872 HSP90AB3PQ58FF7 597 aa20.77■□□□□ 0.92
CHMP1A-209ENST00000550872 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
CHMP1A-209ENST00000550872 CACNA1FO60840 1977 aa20.77■□□□□ 0.92
CHMP1A-209ENST00000550872 FAM177BA6PVY3 158 aa20.76■□□□□ 0.91
CHMP1A-209ENST00000550872 NPHP1O15259 732 aa20.76■□□□□ 0.91
CHMP1A-209ENST00000550872 FLIIQ13045 1269 aa20.76■□□□□ 0.91
CHMP1A-209ENST00000550872 TCIRG1Q13488 830 aa20.76■□□□□ 0.91
CHMP1A-209ENST00000550872 ZNF34Q8IZ26 560 aa20.76■□□□□ 0.91
CHMP1A-209ENST00000550872 YTHDC1Q96MU7 727 aaKnown RBP20.76■□□□□ 0.91
CHMP1A-209ENST00000550872 CD2APQ9Y5K6 639 aa20.76■□□□□ 0.91
CHMP1A-209ENST00000550872 NBPF5PQ86XG9 351 aaPredicted RBP20.75■□□□□ 0.91
CHMP1A-209ENST00000550872 SSH1Q8WYL5 1049 aa20.75■□□□□ 0.91
CHMP1A-209ENST00000550872 ATP10DQ9P241 1426 aa20.75■□□□□ 0.91
CHMP1A-209ENST00000550872 FKBP5Q13451 457 aaPredicted RBP20.74■□□□□ 0.91
CHMP1A-209ENST00000550872 KSR2Q6VAB6 950 aa20.74■□□□□ 0.91
CHMP1A-209ENST00000550872 PI4KAP2A4QPH2 592 aa20.73■□□□□ 0.91
CHMP1A-209ENST00000550872 ALDH1L2Q3SY69 923 aa20.73■□□□□ 0.91
CHMP1A-209ENST00000550872 PARP10Q53GL7 1025 aa20.73■□□□□ 0.91
CHMP1A-209ENST00000550872 PRR5LQ6MZQ0 368 aa20.73■□□□□ 0.91
CHMP1A-209ENST00000550872 TPTE2Q6XPS3 522 aa20.73■□□□□ 0.91
CHMP1A-209ENST00000550872 MRPL50Q8N5N7 158 aaKnown RBP20.73■□□□□ 0.91
CHMP1A-209ENST00000550872 PI4KAP1Q8N8J0 262 aa20.73■□□□□ 0.91
CHMP1A-209ENST00000550872 CNBD1Q8NA66 436 aa20.73■□□□□ 0.91
CHMP1A-209ENST00000550872 BCL2L13Q9BXK5 485 aa20.73■□□□□ 0.91
CHMP1A-209ENST00000550872 MAP3K2Q9Y2U5 619 aa20.73■□□□□ 0.91
CHMP1A-209ENST00000550872 AFDNP55196 1824 aaKnown RBP20.72■□□□□ 0.91
CHMP1A-209ENST00000550872 GTF2E1P29083 439 aaPredicted RBP20.72■□□□□ 0.91
CHMP1A-209ENST00000550872 SUSD4Q5VX71 490 aa20.72■□□□□ 0.91
CHMP1A-209ENST00000550872 CCDC24Q8N4L8 307 aa20.72■□□□□ 0.91
CHMP1A-209ENST00000550872 SMC4Q9NTJ3 1288 aa20.72■□□□□ 0.91
CHMP1A-209ENST00000550872 UBN2Q6ZU65 1347 aa20.72■□□□□ 0.91
CHMP1A-209ENST00000550872 ATP5J2-PTCD1G3V325 749 aa20.71■□□□□ 0.91
CHMP1A-209ENST00000550872 PPP1R42Q7Z4L9 355 aa20.71■□□□□ 0.91
CHMP1A-209ENST00000550872 NLGN2Q8NFZ4 835 aa20.71■□□□□ 0.91
CHMP1A-209ENST00000550872 MYD88Q99836 296 aa20.71■□□□□ 0.91
CHMP1A-209ENST00000550872 METTL22Q9BUU2 404 aaPredicted RBP20.71■□□□□ 0.91
CHMP1A-209ENST00000550872 NYXQ9GZU5 481 aa20.71■□□□□ 0.91
CHMP1A-209ENST00000550872 C10orf71Q711Q0 1435 aa20.7■□□□□ 0.9
CHMP1A-209ENST00000550872 ST5P78524 1137 aa20.7■□□□□ 0.9
CHMP1A-209ENST00000550872 NLRP10Q86W26 655 aa20.7■□□□□ 0.9
CHMP1A-209ENST00000550872 ISCA1Q9BUE6 129 aa20.7■□□□□ 0.9
CHMP1A-209ENST00000550872 ADCY9O60503 1353 aa20.7■□□□□ 0.9
CHMP1A-209ENST00000550872 RARSP54136 660 aaKnown RBP20.69■□□□□ 0.9
CHMP1A-209ENST00000550872 NEXNQ0ZGT2 675 aa20.69■□□□□ 0.9
CHMP1A-209ENST00000550872 UTP14AQ9BVJ6 771 aaKnown RBP20.69■□□□□ 0.9
CHMP1A-209ENST00000550872 NRXN2Q9P2S2 1712 aa20.69■□□□□ 0.9
CHMP1A-209ENST00000550872 ARFGEF2Q9Y6D5 1785 aa20.68■□□□□ 0.9
CHMP1A-209ENST00000550872 TGFB2P61812 414 aa20.68■□□□□ 0.9
CHMP1A-209ENST00000550872 TRIM28Q13263 835 aaKnown RBP20.68■□□□□ 0.9
CHMP1A-209ENST00000550872 NUTM1Q86Y26 1132 aa20.68■□□□□ 0.9
CHMP1A-209ENST00000550872 DNAAF4Q8WXU2 420 aa20.68■□□□□ 0.9
CHMP1A-209ENST00000550872 NTSR2O95665 410 aa20.67■□□□□ 0.9
CHMP1A-209ENST00000550872 BRIP1Q9BX63 1249 aa20.67■□□□□ 0.9
CHMP1A-209ENST00000550872 TRMT112Q9UI30 125 aaKnown RBP20.67■□□□□ 0.9
CHMP1A-209ENST00000550872 ANKRD36CQ5JPF3 1778 aa20.67■□□□□ 0.9
CHMP1A-209ENST00000550872 A0A0G2JLW4 131 aa20.66■□□□□ 0.9
CHMP1A-209ENST00000550872 F6X3S4 739 aa20.66■□□□□ 0.9
CHMP1A-209ENST00000550872 ERFEQ4G0M1 354 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms