RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 CCDC9Q9Y3X0 531 aaKnown RBP11.1□□□□□ -0.63
UBE2N-205ENST00000550657 FAM208AQ9UK61 1670 aaKnown RBP11.1□□□□□ -0.63
UBE2N-205ENST00000550657 CABLES1Q8TDN4 633 aa11.1□□□□□ -0.63
UBE2N-205ENST00000550657 RAPGEF4Q8WZA2 1011 aa11.1□□□□□ -0.63
UBE2N-205ENST00000550657 JAKMIP1Q96N16 626 aaKnown RBP11.1□□□□□ -0.63
UBE2N-205ENST00000550657 CHMP4AQ9BY43 222 aa11.1□□□□□ -0.63
UBE2N-205ENST00000550657 PXDNLA1KZ92 1463 aa11.1□□□□□ -0.63
UBE2N-205ENST00000550657 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.633e-9■■■□□ 17.9
UBE2N-205ENST00000550657 GPATCH3Q96I76 525 aa11.09□□□□□ -0.63
UBE2N-205ENST00000550657 BOLA2Q9H3K6 86 aa11.09□□□□□ -0.63
UBE2N-205ENST00000550657 TLR7Q9NYK1 1049 aaKnown RBP11.09□□□□□ -0.63
UBE2N-205ENST00000550657 LRRC37A3O60309 1634 aa11.09□□□□□ -0.63
UBE2N-205ENST00000550657 MARF1Q9Y4F3 1742 aaKnown RBP11.09□□□□□ -0.63
UBE2N-205ENST00000550657 GRM8O00222 908 aa11.09□□□□□ -0.63
UBE2N-205ENST00000550657 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
UBE2N-205ENST00000550657 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
UBE2N-205ENST00000550657 INTS4Q96HW7 963 aaKnown RBP11.09□□□□□ -0.63
UBE2N-205ENST00000550657 RUFY3Q7L099 469 aa11.09□□□□□ -0.63
UBE2N-205ENST00000550657 USP48Q86UV5 1035 aa11.09□□□□□ -0.63
UBE2N-205ENST00000550657 CCDC83Q8IWF9 413 aa11.09□□□□□ -0.63
UBE2N-205ENST00000550657 FAM227BQ96M60 508 aa11.09□□□□□ -0.63
UBE2N-205ENST00000550657 LARGE1O95461 756 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 DDX58O95786 925 aaKnown RBP11.08□□□□□ -0.64
UBE2N-205ENST00000550657 CHRNA2Q15822 529 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 MYD88Q99836 296 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 HYPKQ9NX55 129 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 CHD2O14647 1828 aaKnown RBP11.08□□□□□ -0.64
UBE2N-205ENST00000550657 ALDH1L1O75891 902 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 XAGE3Q8WTP9 111 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 RUFY2Q8WXA3 655 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 EAF2Q96CJ1 260 aaPredicted RBP11.08□□□□□ -0.64
UBE2N-205ENST00000550657 TCEANC2Q96MN5 208 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 SMC3Q9UQE7 1217 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 CNPY2Q9Y2B0 182 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 WDR33Q9C0J8 1336 aaKnown RBP11.08□□□□□ -0.64
UBE2N-205ENST00000550657 ADGRL3Q9HAR2 1447 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 NFAT5O94916 1531 aa11.08□□□□□ -0.64
UBE2N-205ENST00000550657 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
UBE2N-205ENST00000550657 MBD3O95983 291 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 MSNP26038 577 aaKnown RBP11.07□□□□□ -0.64
UBE2N-205ENST00000550657 LRSAM1Q6UWE0 723 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 COPS6Q7L5N1 327 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 MPNDQ8N594 471 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 LINS1Q8NG48 757 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 LIMCH1Q9UPQ0 1083 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 TTC41PQ6P2S7 1318 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 FIBPO43427 364 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 SASH1O94885 1247 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 NECAB1Q8N987 351 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 EDC3Q96F86 508 aaKnown RBP11.07□□□□□ -0.64
UBE2N-205ENST00000550657 KAZALD1Q96I82 304 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 PPP1R9BQ96SB3 815 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 PDRG1Q9NUG6 133 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 NDUFB9Q9Y6M9 179 aa11.07□□□□□ -0.64
UBE2N-205ENST00000550657 ZNF790Q6PG37 636 aa11.06□□□□□ -0.64
UBE2N-205ENST00000550657 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
UBE2N-205ENST00000550657 DDX21Q9NR30 783 aaKnown RBP eCLIP11.06□□□□□ -0.64
UBE2N-205ENST00000550657 IGKV5-2P06315 115 aa11.06□□□□□ -0.64
UBE2N-205ENST00000550657 NEXNQ0ZGT2 675 aa11.06□□□□□ -0.64
UBE2N-205ENST00000550657 ERC1Q8IUD2 1116 aa11.06□□□□□ -0.64
UBE2N-205ENST00000550657 VPS37CA5D8V6 355 aaPredicted RBP11.06□□□□□ -0.64
UBE2N-205ENST00000550657 ATP5J2-PTCD1G3V325 749 aa11.06□□□□□ -0.64
UBE2N-205ENST00000550657 PTCD1O75127 700 aaKnown RBP11.06□□□□□ -0.64
UBE2N-205ENST00000550657 SYT1P21579 422 aa11.06□□□□□ -0.64
UBE2N-205ENST00000550657 NMIQ13287 307 aaPredicted RBP11.06□□□□□ -0.64
UBE2N-205ENST00000550657 TTC14Q96N46 770 aa11.06□□□□□ -0.64
UBE2N-205ENST00000550657 USP54Q70EL1 1684 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 MTX1Q13505 466 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 COL9A3Q14050 684 aaPredicted RBP11.05□□□□□ -0.64
UBE2N-205ENST00000550657 PDIA6Q15084 440 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 EPHA10Q5JZY3 1008 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 EVI5LQ96CN4 794 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 ZNF496Q96IT1 587 aaPredicted RBP11.05□□□□□ -0.64
UBE2N-205ENST00000550657 ERBB3P21860 1342 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 LTN1O94822 1766 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 STX6O43752 255 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 TATP17735 454 aaPredicted RBP11.05□□□□□ -0.64
UBE2N-205ENST00000550657 ZSCAN30Q86W11 494 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 CHMP3Q9Y3E7 222 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.05□□□□□ -0.64
UBE2N-205ENST00000550657 RBM8AQ9Y5S9 174 aaKnown RBP11.05□□□□□ -0.64
UBE2N-205ENST00000550657 USP16Q9Y5T5 823 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 CYP46A1Q9Y6A2 500 aa11.05□□□□□ -0.64
UBE2N-205ENST00000550657 ZKSCAN1P17029 563 aaPredicted RBP11.04□□□□□ -0.64
UBE2N-205ENST00000550657 GJB2P29033 226 aa11.04□□□□□ -0.64
UBE2N-205ENST00000550657 TTC5Q8N0Z6 440 aa11.04□□□□□ -0.64
UBE2N-205ENST00000550657 HDAC5Q9UQL6 1122 aa11.04□□□□□ -0.64
UBE2N-205ENST00000550657 RPAP1Q9BWH6 1393 aaPredicted RBP11.04□□□□□ -0.64
UBE2N-205ENST00000550657 ZSCAN22P10073 491 aaPredicted RBP11.04□□□□□ -0.64
UBE2N-205ENST00000550657 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
UBE2N-205ENST00000550657 SLC52A2Q9HAB3 445 aa11.04□□□□□ -0.64
UBE2N-205ENST00000550657 ADAMTSL3P82987 1691 aa11.04□□□□□ -0.64
UBE2N-205ENST00000550657 A0A0D9SFI3 127 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 NPHP4O75161 1426 aaPredicted RBP11.03□□□□□ -0.64
UBE2N-205ENST00000550657 LARP1Q6PKG0 1096 aaKnown RBP11.03□□□□□ -0.64
UBE2N-205ENST00000550657 SYAP1Q96A49 352 aaPredicted RBP11.03□□□□□ -0.64
UBE2N-205ENST00000550657 NEURL1BA8MQ27 555 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 CHGBP05060 677 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 PTMAP06454 111 aaKnown RBP11.03□□□□□ -0.64
UBE2N-205ENST00000550657 PLCB2Q00722 1185 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms