RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
RAB5C-205ENST00000550013 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
RAB5C-205ENST00000550013 ARFGEF2Q9Y6D5 1785 aa20.62■□□□□ 0.89
RAB5C-205ENST00000550013 PCNTO95613 3336 aa20.61■□□□□ 0.89
RAB5C-205ENST00000550013 POTECB2RU33 542 aa20.61■□□□□ 0.89
RAB5C-205ENST00000550013 PPP2R1AP30153 589 aa20.61■□□□□ 0.89
RAB5C-205ENST00000550013 ST5P78524 1137 aa20.6■□□□□ 0.89
RAB5C-205ENST00000550013 DCTN1Q14203 1278 aa20.6■□□□□ 0.89
RAB5C-205ENST00000550013 SRGNP10124 158 aa20.59■□□□□ 0.89
RAB5C-205ENST00000550013 ERFEQ4G0M1 354 aa20.59■□□□□ 0.89
RAB5C-205ENST00000550013 STYK1Q6J9G0 422 aa20.59■□□□□ 0.89
RAB5C-205ENST00000550013 PRPF40BQ6NWY9 871 aaKnown RBP20.59■□□□□ 0.89
RAB5C-205ENST00000550013 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
RAB5C-205ENST00000550013 CNKSR1Q969H4 720 aa20.59■□□□□ 0.89
RAB5C-205ENST00000550013 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
RAB5C-205ENST00000550013 TAOK3Q9H2K8 898 aa20.58■□□□□ 0.89
RAB5C-205ENST00000550013 LTBP3Q9NS15 1303 aa20.57■□□□□ 0.88
RAB5C-205ENST00000550013 DPY19L2Q6NUT2 758 aa20.57■□□□□ 0.88
RAB5C-205ENST00000550013 NBPF5PQ86XG9 351 aaPredicted RBP20.57■□□□□ 0.88
RAB5C-205ENST00000550013 MASTLQ96GX5 879 aa20.57■□□□□ 0.88
RAB5C-205ENST00000550013 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
RAB5C-205ENST00000550013 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
RAB5C-205ENST00000550013 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
RAB5C-205ENST00000550013 CLEC4GQ6UXB4 293 aa20.55■□□□□ 0.88
RAB5C-205ENST00000550013 DLG5Q8TDM6 1919 aa20.55■□□□□ 0.88
RAB5C-205ENST00000550013 COL13A1Q5TAT6 717 aaPredicted RBP20.54■□□□□ 0.88
RAB5C-205ENST00000550013 ZNF652Q9Y2D9 606 aa20.54■□□□□ 0.88
RAB5C-205ENST00000550013 DDNO94850 711 aaPredicted RBP20.53■□□□□ 0.88
RAB5C-205ENST00000550013 C7orf43Q8WVR3 580 aa20.53■□□□□ 0.88
RAB5C-205ENST00000550013 MIS18AQ9NYP9 233 aa20.53■□□□□ 0.88
RAB5C-205ENST00000550013 LAMB4A4D0S4 1761 aa20.53■□□□□ 0.88
RAB5C-205ENST00000550013 FAM177BA6PVY3 158 aa20.52■□□□□ 0.88
RAB5C-205ENST00000550013 HTATSF1O43719 755 aaKnown RBP20.52■□□□□ 0.88
RAB5C-205ENST00000550013 SOGA3Q5TF21 947 aa20.52■□□□□ 0.88
RAB5C-205ENST00000550013 NIP7Q9Y221 180 aaKnown RBP eCLIP20.52■□□□□ 0.88
RAB5C-205ENST00000550013 POTEIP0CG38 1075 aa20.51■□□□□ 0.87
RAB5C-205ENST00000550013 POTEJP0CG39 1038 aa20.51■□□□□ 0.87
RAB5C-205ENST00000550013 TAF7Q15545 349 aaPredicted RBP20.51■□□□□ 0.87
RAB5C-205ENST00000550013 KDM3BQ7LBC6 1761 aa20.5■□□□□ 0.87
RAB5C-205ENST00000550013 KLRG2A4D1S0 409 aaPredicted RBP20.5■□□□□ 0.87
RAB5C-205ENST00000550013 NPR1P16066 1061 aa20.5■□□□□ 0.87
RAB5C-205ENST00000550013 HLFQ16534 295 aa20.5■□□□□ 0.87
RAB5C-205ENST00000550013 OLFM4Q6UX06 510 aa20.5■□□□□ 0.87
RAB5C-205ENST00000550013 CCDC93Q567U6 631 aa20.49■□□□□ 0.87
RAB5C-205ENST00000550013 TPTE2Q6XPS3 522 aa20.49■□□□□ 0.87
RAB5C-205ENST00000550013 CHADLQ6NUI6 762 aa20.48■□□□□ 0.87
RAB5C-205ENST00000550013 NUP98P52948 1817 aa20.48■□□□□ 0.87
RAB5C-205ENST00000550013 RGL2O15211 777 aa20.47■□□□□ 0.87
RAB5C-205ENST00000550013 NGEFQ8N5V2 710 aa20.47■□□□□ 0.87
RAB5C-205ENST00000550013 ZNF277Q9NRM2 450 aaPredicted RBP20.47■□□□□ 0.87
RAB5C-205ENST00000550013 SCN4AP35499 1836 aa20.46■□□□□ 0.87
RAB5C-205ENST00000550013 HSPA1AP0DMV8 641 aaKnown RBP20.46■□□□□ 0.87
RAB5C-205ENST00000550013 HSPA1BP0DMV9 641 aaKnown RBP20.46■□□□□ 0.87
RAB5C-205ENST00000550013 FKBP4Q02790 459 aaKnown RBP eCLIP20.46■□□□□ 0.87
RAB5C-205ENST00000550013 THUMPD2Q9BTF0 503 aaKnown RBP20.45■□□□□ 0.86
RAB5C-205ENST00000550013 ZNF541Q9H0D2 1346 aa20.45■□□□□ 0.86
RAB5C-205ENST00000550013 ABCC12Q96J65 1359 aa20.45■□□□□ 0.86
RAB5C-205ENST00000550013 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
RAB5C-205ENST00000550013 IQCA1LA6NCM1 817 aa20.43■□□□□ 0.86
RAB5C-205ENST00000550013 GTF2E1P29083 439 aaPredicted RBP20.43■□□□□ 0.86
RAB5C-205ENST00000550013 NUTM1Q86Y26 1132 aa20.43■□□□□ 0.86
RAB5C-205ENST00000550013 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
RAB5C-205ENST00000550013 TAF1DQ9H5J8 278 aaPredicted RBP20.43■□□□□ 0.86
RAB5C-205ENST00000550013 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
RAB5C-205ENST00000550013 NEFMP07197 916 aa20.42■□□□□ 0.86
RAB5C-205ENST00000550013 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
RAB5C-205ENST00000550013 TTLL7Q6ZT98 887 aa20.42■□□□□ 0.86
RAB5C-205ENST00000550013 RTKN2Q8IZC4 609 aa20.42■□□□□ 0.86
RAB5C-205ENST00000550013 TNS4Q8IZW8 715 aa20.42■□□□□ 0.86
RAB5C-205ENST00000550013 PNISRQ8TF01 805 aaKnown RBP20.42■□□□□ 0.86
RAB5C-205ENST00000550013 CREBZFQ9NS37 354 aa20.42■□□□□ 0.86
RAB5C-205ENST00000550013 MKRN1Q9UHC7 482 aaKnown RBP20.42■□□□□ 0.86
RAB5C-205ENST00000550013 CAPN15O75808 1086 aa20.41■□□□□ 0.86
RAB5C-205ENST00000550013 ALDH1B1P30837 517 aa20.41■□□□□ 0.86
RAB5C-205ENST00000550013 NFE2L2Q16236 605 aa20.41■□□□□ 0.86
RAB5C-205ENST00000550013 LDHDQ86WU2 507 aa20.41■□□□□ 0.86
RAB5C-205ENST00000550013 MAP3K15Q6ZN16 1313 aa20.41■□□□□ 0.86
RAB5C-205ENST00000550013 ERVV-1B6SEH8 477 aa20.4■□□□□ 0.86
RAB5C-205ENST00000550013 MYL6BP14649 208 aa20.4■□□□□ 0.86
RAB5C-205ENST00000550013 SYNE4Q8N205 404 aa20.4■□□□□ 0.86
RAB5C-205ENST00000550013 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
RAB5C-205ENST00000550013 NYXQ9GZU5 481 aa20.4■□□□□ 0.86
RAB5C-205ENST00000550013 UBN2Q6ZU65 1347 aa20.39■□□□□ 0.85
RAB5C-205ENST00000550013 PASKQ96RG2 1323 aa20.39■□□□□ 0.85
RAB5C-205ENST00000550013 GPTP24298 496 aa20.39■□□□□ 0.85
RAB5C-205ENST00000550013 IARSP41252 1262 aaKnown RBP20.39■□□□□ 0.85
RAB5C-205ENST00000550013 CRY2Q49AN0 593 aa20.39■□□□□ 0.85
RAB5C-205ENST00000550013 EAPPQ56P03 285 aaPredicted RBP20.39■□□□□ 0.85
RAB5C-205ENST00000550013 KIF6Q6ZMV9 814 aa20.39■□□□□ 0.85
RAB5C-205ENST00000550013 ZBTB3Q9H5J0 574 aa20.39■□□□□ 0.85
RAB5C-205ENST00000550013 ADAMTSL1Q8N6G6 1762 aa20.39■□□□□ 0.85
RAB5C-205ENST00000550013 FZD9O00144 591 aa20.37■□□□□ 0.85
RAB5C-205ENST00000550013 SLC51AQ86UW1 340 aa20.37■□□□□ 0.85
RAB5C-205ENST00000550013 HACL1Q9UJ83 578 aa20.37■□□□□ 0.85
RAB5C-205ENST00000550013 COL4A5P29400 1685 aa20.37■□□□□ 0.85
RAB5C-205ENST00000550013 RNF123Q5XPI4 1314 aa20.36■□□□□ 0.85
RAB5C-205ENST00000550013 SUSD4Q5VX71 490 aa20.36■□□□□ 0.85
RAB5C-205ENST00000550013 PSMD1Q99460 953 aa20.36■□□□□ 0.85
RAB5C-205ENST00000550013 RIC1Q4ADV7 1423 aa20.36■□□□□ 0.85
RAB5C-205ENST00000550013 CNTNAP1P78357 1384 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms